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(-) Description

Title :  CRYSTAL STRUCTURE OF ACETOIN UTILIZATION PROTEIN (ZP_00540088.1) FROM EXIGUOBACTERIUM SIBIRICUM 255-15 AT 2.33 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  18 May 07  (Deposition) - 12 Jun 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.33
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  A,B,C,D,E,F  (1x)
Biol. Unit 8:  C,D,E,F  (1x)
Biol. Unit 9:  A,B  (1x)
Biol. Unit 10:  A,C,D,E,F  (1x)
Biol. Unit 11:  B,C,D,E,F  (1x)
Keywords :  Zp_00540088. 1, Acetoin Utilization Protein, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Acetoin Utilization Protein (Zp_00540088. 1) From Exiguobacterium Sibiricum 255-15 At 2. 33 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ACETOIN UTILIZATION PROTEIN
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ZP_00540088.1, EXIGDRAFT_0571
    Organism Scientific: EXIGUOBACTERIUM SIBIRICUM
    Organism Taxid: 262543
    Strain: 255-15

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F
Biological Unit 7 (1x): ABCDEF
Biological Unit 8 (1x):   CDEF
Biological Unit 9 (1x): AB    
Biological Unit 10 (1x): A CDEF
Biological Unit 11 (1x):  BCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 63)

Asymmetric Unit (4, 63)
No.NameCountTypeFull Name
1ACY4Ligand/IonACETIC ACID
2CA7Ligand/IonCALCIUM ION
3EDO7Ligand/Ion1,2-ETHANEDIOL
4MSE45Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (3, 12)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO3Ligand/Ion1,2-ETHANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 7)
No.NameCountTypeFull Name
1ACY-1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO-1Ligand/Ion1,2-ETHANEDIOL
4MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (2, 8)
No.NameCountTypeFull Name
1ACY-1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO1Ligand/Ion1,2-ETHANEDIOL
4MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (2, 10)
No.NameCountTypeFull Name
1ACY-1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO2Ligand/Ion1,2-ETHANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (2, 10)
No.NameCountTypeFull Name
1ACY2Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO-1Ligand/Ion1,2-ETHANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (3, 9)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO1Ligand/Ion1,2-ETHANEDIOL
4MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 7 (3, 56)
No.NameCountTypeFull Name
1ACY4Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO7Ligand/Ion1,2-ETHANEDIOL
4MSE45Mod. Amino AcidSELENOMETHIONINE
Biological Unit 8 (3, 37)
No.NameCountTypeFull Name
1ACY3Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO4Ligand/Ion1,2-ETHANEDIOL
4MSE30Mod. Amino AcidSELENOMETHIONINE
Biological Unit 9 (3, 19)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO3Ligand/Ion1,2-ETHANEDIOL
4MSE15Mod. Amino AcidSELENOMETHIONINE
Biological Unit 10 (3, 49)
No.NameCountTypeFull Name
1ACY4Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO7Ligand/Ion1,2-ETHANEDIOL
4MSE38Mod. Amino AcidSELENOMETHIONINE
Biological Unit 11 (3, 44)
No.NameCountTypeFull Name
1ACY3Ligand/IonACETIC ACID
2CA-1Ligand/IonCALCIUM ION
3EDO4Ligand/Ion1,2-ETHANEDIOL
4MSE37Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR D:133 , HOH D:222 , HOH D:248 , HOH D:249 , HOH D:250BINDING SITE FOR RESIDUE CA D 211
02AC2SOFTWAREGLY B:98 , THR B:133 , HOH B:226 , HOH B:231 , HOH B:244 , HOH B:255BINDING SITE FOR RESIDUE CA B 211
03AC3SOFTWAREGLY A:98 , THR A:133 , HOH A:221 , HOH A:232 , HOH A:256BINDING SITE FOR RESIDUE CA A 211
04AC4SOFTWAREGLY F:98 , THR F:133BINDING SITE FOR RESIDUE CA F 211
05AC5SOFTWAREGLY C:98 , THR C:133 , HOH C:223 , HOH C:230BINDING SITE FOR RESIDUE CA C 211
06AC6SOFTWARESER A:87 , GLY A:89 , GLU B:88BINDING SITE FOR RESIDUE CA A 212
07AC7SOFTWARETHR E:133 , ACY E:213BINDING SITE FOR RESIDUE CA E 211
08AC8SOFTWAREALA A:30 , HIS A:48 , GLU A:49BINDING SITE FOR RESIDUE EDO A 213
09AC9SOFTWAREALA A:40 , PHE A:41 , ILE A:100 , GLU A:134 , HIS A:138 , TRP A:139 , TYR A:151 , HOH A:239BINDING SITE FOR RESIDUE EDO A 214
10BC1SOFTWAREPRO A:168 , THR A:169 , PRO A:178 , ASN A:180 , HOH A:254 , HOH A:259 , TYR C:136BINDING SITE FOR RESIDUE EDO A 215
11BC2SOFTWAREASP C:170 , ARG C:205 , ARG C:206 , PHE C:207 , TYR D:136 , TRP D:137BINDING SITE FOR RESIDUE EDO C 212
12BC3SOFTWAREGLU D:59 , ARG D:61 , TYR D:128BINDING SITE FOR RESIDUE EDO D 212
13BC4SOFTWAREPRO D:172 , GLU D:173 , SER D:176BINDING SITE FOR RESIDUE EDO D 213
14BC5SOFTWARELYS A:33 , LEU A:34 , ALA A:45 , HIS A:48BINDING SITE FOR RESIDUE ACY A 216
15BC6SOFTWAREGLU E:59 , ARG E:61 , LEU E:95 , TYR E:128BINDING SITE FOR RESIDUE ACY E 212
16BC7SOFTWAREGLU F:88 , HIS F:197 , ARG F:204BINDING SITE FOR RESIDUE ACY F 213
17BC8SOFTWARELEU E:97 , GLY E:98 , THR E:132 , THR E:133 , GLU E:134 , CA E:211 , HOH E:232BINDING SITE FOR RESIDUE ACY E 213

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Q04)

(-) Cis Peptide Bonds  (9, 9)

Asymmetric Unit
No.Residues
1Gly A:16 -Pro A:17
2Gly A:22 -Pro A:23
3Gly B:22 -Pro B:23
4Gly C:22 -Pro C:23
5Asp C:35 -Pro C:36
6Gly D:22 -Pro D:23
7Gly E:22 -Pro E:23
8Gly F:16 -Pro F:17
9Gly F:22 -Pro F:23

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Q04)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Q04)

(-) Exons   (0, 0)

(no "Exon" information available for 2Q04)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:211
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:211
                             1                                                                                                                                                                                                                   
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209 
         B1YKD7_EXIS2     - -MFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFMYD 210
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2q04A00 A:0-210  [code=3.40.630.30, no name defined]                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee......eeeee..hhhhhh..ee........hhhhhhhhhhhhhh....eeeeeee..eeeeeeeee.....hhhhh.....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh.hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q04 A   0 GmFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFmYD 210
                             |       9        19        29        39        49        59        69        79        89        99       109       119|    | 129       139       149     | 159       169       179   |   189       199       209 
                             |                                                                                                                    120-MSE|                           155-MSE                     183-MSE                  208-MSE
                             1-MSE                                                                                                                     125-MSE                          158-MSE                                                
                                                                                                                                                                                         159-MSE                                               


Chain B from PDB  Type:PROTEIN  Length:207
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:207
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       
         B1YKD7_EXIS2     2 FEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFM 208
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2q04B00 B:2-207  [code=3.40.630.30, no name defined]                                                                                                                                                          - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee......eeeee..hhhhhhhhee........hhhhhhhhhhhhhh....eeeeeee..eeeeeeeee.....hhhhhhhh..eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh.eeeeeehhhhh.hhhhh.hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q04 B   2 FEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFm 208
                                    11        21        31        41        51        61        71        81        91       101       111       121   |   131       141       151   |  |161       171       181 |     191       201      |
                                                                                                                                                120-MSE|                           155-MSE                     183-MSE                  208-MSE
                                                                                                                                                     125-MSE                          158-MSE                                              
                                                                                                                                                                                       159-MSE                                             


Chain C from PDB  Type:PROTEIN  Length:208
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
         B1YKD7_EXIS2     2 FEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFMY 209
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2q04C00 C:2-209  [code=3.40.630.30, no name defined]                                                                                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee......eeeee..hhhhhhhhee........hhhhhhhhhhhhhhh...eeeeeee..eeeeeeeee.....hhhhh.....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh.hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q04 C   2 FEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFmY 209
                                    11        21        31        41        51        61        71        81        91       101       111       121   |   131       141       151   |  |161       171       181 |     191       201      | 
                                                                                                                                                120-MSE|                           155-MSE                     183-MSE                  208-MSE
                                                                                                                                                     125-MSE                          158-MSE                                               
                                                                                                                                                                                       159-MSE                                              


Chain D from PDB  Type:PROTEIN  Length:210
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:210
                             1                                                                                                                                                                                                                   
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209
         B1YKD7_EXIS2     - -MFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFMY 209
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2q04D00 D:0-209  [code=3.40.630.30, no name defined]                                                                                                                                                               CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeee......eeeee..hhhhhh..ee........hhhhhhhhhhhhhhh...eeeeeee..eeeeeeeee.....hhhhh.....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh.eeeeee............hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2q04 D   0 GmFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFmY 209
                             |       9        19        29        39        49        59        69        79        89        99       109       119|    | 129       139       149     | 159       169       179   |   189       199       209
                             |                                                                                                                    120-MSE|                           155-MSE                     183-MSE                  208-MSE
                             1-MSE                                                                                                                     125-MSE                          158-MSE                                               
                                                                                                                                                                                         159-MSE                                              


Chain E from PDB  Type:PROTEIN  Length:210
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:210
                             1                                                                                                                                                                                                                   
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209
         B1YKD7_EXIS2     - -MFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFMY 209
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2q04E00 E:0-209  [code=3.40.630.30, no name defined]                                                                                                                                                               CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeee......eeeee..hhhhhh..ee........hhhhhhhhhhhhhhh...eeeeeee..eeeeeeeee.....hhhhh.....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh.hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhh.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2q04 E   0 GmFEKQFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFmY 209
                             |       9        19        29        39        49        59        69        79        89        99       109       119|    | 129       139       149     | 159       169       179   |   189       199       209
                             |                                                                                                                    120-MSE|                           155-MSE                     183-MSE                  208-MSE
                             1-MSE                                                                                                                     125-MSE                          158-MSE                                               
                                                                                                                                                                                         159-MSE                                              


Chain F from PDB  Type:PROTEIN  Length:204
 aligned with B1YKD7_EXIS2 | B1YKD7 from UniProtKB/TrEMBL  Length:210

    Alignment length:204
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204    
         B1YKD7_EXIS2     5 QFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIASHPANCLMARIGKHVAPEVVAHFDALRLRRRFM 208
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2q04F00 F:5-207  [code=3.40.630.30, no name defined]                                                                                                                                                       - CATH domains
           Pfam domains (1) ------------------------------------------------------------Acetyltransf_1-2q04F01 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------Acetyltransf_1-2q04F02 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) ------------------------------------------------------------Acetyltransf_1-2q04F03 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (3)
           Pfam domains (4) ------------------------------------------------------------Acetyltransf_1-2q04F04 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (4)
           Pfam domains (5) ------------------------------------------------------------Acetyltransf_1-2q04F05 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (5)
           Pfam domains (6) ------------------------------------------------------------Acetyltransf_1-2q04F06 F:65-136                                         ------------------------------------------------------------------------ Pfam domains (6)
         Sec.struct. author ..eeeee......eeeee..hhhhhhhhee........hhhhhhhhhhhhhh....eeeeeee..eeeeeeeee.....hhhhh.....eeeeeeeee........hhhhhhhhhhhhhhhhh.eeeeeehhhhh.......hhhhhhhhhhhhhhhh..eee...hhhhhh....eeeeee....hhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2q04 F   5 QFNHRTLETSLGPVEIEGPVTSQILATYKLDPGLTAFRQPAEQHEALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSmLDPAmEHYLILTTEYYWHWDLKGSGLSVWDYRKImEKmmNHGGLVFFPTDDPEIASHPANCLmARIGKHVAPEVVAHFDALRLRRRFm 208
                                    14        24        34        44        54        64        74        84        94       104       114     | 124|      134       144       154|  ||  164       174       184       194       204   |
                                                                                                                                             120-MSE|                           155-MSE                     183-MSE                  208-MSE
                                                                                                                                                  125-MSE                          158-MSE                                              
                                                                                                                                                                                    159-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Q04)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: Acetyltrans (109)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (B1YKD7_EXIS2 | B1YKD7)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0019152    acetoin dehydrogenase activity    Catalysis of the reaction: acetoin + NAD+ = diacetyl + NADH + H+.
biological process
    GO:0045150    acetoin catabolic process    The chemical reactions and pathways resulting in the breakdown of acetoin, 3-hydroxy-2-butanone.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  2q04
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 Related Entries

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