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(-) Description

Title :  THE CRYSTAL STRUCTURE OF ISOMERASE DOMAIN OF GLUCOSAMINE-6-PHOSPHATE SYNTHASE FROM CANDIDA ALBICANS
 
Authors :  J. Raczynska, J. Olchowy, S. Milewski, W. Rypniewski
Date :  09 May 07  (Deposition) - 11 Sep 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Glucosamine-6-Phosphate Synthase; Aldose/Ketose Isomerase; Crystal Structure; Rossmann-Like Fold; , Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Raczynska, J. Olchowy, P. V. Konariev, D. I. Svergun, S. Milewski, W. Rypniewski
The Crystal And Solution Studies Of Glucosamine-6-Phosphate Synthase From Candida Albicans
J. Mol. Biol. V. 372 672 2007
PubMed-ID: 17681543  |  Reference-DOI: 10.1016/J.JMB.2007.07.002
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ISOMERASE DOMAIN OF GLUTAMINE-FRUCTOSE-6-PHOSPHATE TRANSAMINASE (ISOMERIZING)
    ChainsA, B, C, D
    EC Number2.6.1.16
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET23B-FRU
    Expression System StrainBL21(DE3)PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentISOMERASE DOMAIN
    GeneGFA1
    Organism ScientificCANDIDA ALBICANS
    Organism Taxid237561
    StrainSC5314
    SynonymHEXOSEPHOSPHATE AMINOTRANSFERASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 14)

Asymmetric/Biological Unit (4, 14)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2F6R4Ligand/IonFRUCTOSE -6-PHOSPHATE
3NA4Ligand/IonSODIUM ION
4UD14Ligand/IonURIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:590 , HOH A:5163 , HOH A:5703 , VAL B:600 , LEU B:605 , GLY B:608 , ILE B:609BINDING SITE FOR RESIDUE ACT A 713
02AC2SOFTWARESER A:484 , ARG A:485 , THR A:487 , UD1 A:5002 , HOH A:5011 , HOH A:5012BINDING SITE FOR RESIDUE NA A 5001
03AC3SOFTWARESER B:484 , ARG B:485 , THR B:487 , UD1 B:5003 , HOH B:5008 , HOH B:5009BINDING SITE FOR RESIDUE NA B 5002
04AC4SOFTWARELEU C:605 , GLY C:608 , ILE C:609 , HOH C:5478 , HOH C:5481 , LYS D:590BINDING SITE FOR RESIDUE ACT C 713
05AC5SOFTWARESER C:484 , ARG C:485 , THR C:487 , UD1 C:5004 , HOH C:5010 , HOH C:5752BINDING SITE FOR RESIDUE NA C 5003
06AC6SOFTWARESER D:484 , ARG D:485 , THR D:487 , UD1 D:5005BINDING SITE FOR RESIDUE NA D 5004
07AC7SOFTWAREARG A:372 , GLY A:383 , GLY A:384 , GLY A:474 , VAL A:476 , SER A:484 , THR A:487 , CYS A:489 , GLY A:490 , VAL A:491 , HIS A:492 , NA A:5001 , HOH A:5143 , HOH A:5144 , HOH A:5250 , HOH A:5662 , HOH A:5663 , HOH A:5698 , HOH A:5723BINDING SITE FOR RESIDUE UD1 A 5002
08AC8SOFTWARECYS A:403 , GLY A:404 , THR A:405 , SER A:406 , SER A:450 , GLN A:451 , SER A:452 , THR A:455 , ALA A:502 , SER A:503 , LYS A:588 , GLU A:591 , HOH A:5036 , HOH A:5037 , HOH A:5198 , HOH A:5245 , HOH A:5630BINDING SITE FOR RESIDUE F6R A 5003
09AC9SOFTWAREARG B:372 , GLY B:383 , GLY B:384 , GLY B:474 , VAL B:476 , VAL B:479 , SER B:484 , THR B:487 , CYS B:489 , GLY B:490 , VAL B:491 , HIS B:492 , NA B:5002 , HOH B:5021 , HOH B:5022 , HOH B:5336 , HOH B:5337 , HOH B:5350BINDING SITE FOR RESIDUE UD1 B 5003
10BC1SOFTWARECYS B:403 , GLY B:404 , THR B:405 , SER B:406 , SER B:450 , GLN B:451 , SER B:452 , THR B:455 , ALA B:502 , SER B:503 , LYS B:588 , GLU B:591 , HOH B:5157 , HOH B:5158 , HOH B:5345 , HOH B:5618 , HOH B:5702BINDING SITE FOR RESIDUE F6R B 5004
11BC2SOFTWAREARG C:372 , GLY C:383 , GLY C:384 , GLY C:474 , VAL C:476 , SER C:484 , THR C:487 , CYS C:489 , GLY C:490 , VAL C:491 , HIS C:492 , NA C:5003 , HOH C:5018 , HOH C:5186 , HOH C:5281 , HOH C:5282 , HOH C:5283 , HOH C:5408 , HOH C:5423 , HOH C:5428 , HOH C:5429BINDING SITE FOR RESIDUE UD1 C 5004
12BC3SOFTWARECYS C:403 , THR C:405 , SER C:406 , SER C:450 , GLN C:451 , SER C:452 , THR C:455 , ALA C:502 , SER C:503 , LYS C:588 , GLU C:591 , HOH C:5111 , HOH C:5204 , HOH C:5388 , HOH C:5673BINDING SITE FOR RESIDUE F6R C 5005
13BC4SOFTWAREARG D:372 , GLY D:383 , GLY D:384 , GLY D:474 , VAL D:476 , SER D:484 , THR D:487 , CYS D:489 , GLY D:490 , VAL D:491 , HIS D:492 , NA D:5004 , HOH D:5011 , HOH D:5013 , HOH D:5014 , HOH D:5047 , HOH D:5125 , HOH D:5157BINDING SITE FOR RESIDUE UD1 D 5005
14BC5SOFTWARECYS D:403 , GLY D:404 , THR D:405 , SER D:406 , SER D:450 , GLN D:451 , SER D:452 , THR D:455 , ALA D:502 , SER D:503 , LYS D:588 , GLU D:591 , HOH D:5021 , HOH D:5023 , HOH D:5105 , HOH D:5156 , HOH D:5174BINDING SITE FOR RESIDUE F6R D 5006

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2PUT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2PUT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2PUT)

(-) PROSITE Motifs  (1, 8)

Asymmetric/Biological Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GFA1_CANAL389-528
 
 
 
561-703
 
 
 
  8A:388-527
B:388-527
C:388-527
D:388-527
A:560-700
B:560-700
C:560-700
D:560-700

(-) Exons   (0, 0)

(no "Exon" information available for 2PUT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:339
 aligned with GFA1_CANAL | P53704 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:352
                                   359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699  
           GFA1_CANAL   350 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 701
               SCOP domains d2puta_ A: automated matches                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..ee....ee....hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhh..eeeeehhhhhhh.......eeeeeee....hhhhhhhhhhhhhh..eeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhh.eeeeee.....----------..eeee.hhhhhhhhhhhhhhhhhh.....eeeee.......---..eeeee...hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------SIS  PDB: A:388-527 UniProt: 389-528                                                                                                        --------------------------------SIS  PDB: A:560-700 UniProt: 561-703                                                                                                          PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2put A 349 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELK----------LPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIIS---VHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 700
                                   358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       | -       618       628       638       648       658   |   668       678       688       698  
                                                                                                                                                                                                                                                                                           606        617                                      658 662                                      

Chain B from PDB  Type:PROTEIN  Length:352
 aligned with GFA1_CANAL | P53704 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:352
                                   359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699  
           GFA1_CANAL   350 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 701
               SCOP domains d2putb_ B: automated matches                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..ee....ee....hhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhhhh..eeeeehhhhhhh.......eeeeeee....hhhhhhhhhhhhhh..eeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhh..eeeeee......hhhhh......eeee.hhhhhhhhhhhhhhhhhhh....eeeee............eeeee...hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------SIS  PDB: B:388-527 UniProt: 389-528                                                                                                        --------------------------------SIS  PDB: B:560-700 UniProt: 561-703                                                                                                          PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2put B 349 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 700
                                   358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698  

Chain C from PDB  Type:PROTEIN  Length:350
 aligned with GFA1_CANAL | P53704 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:352
                                   359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699  
           GFA1_CANAL   350 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 701
               SCOP domains d2putc_ C: automated matches                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..ee....ee.......hhhhhh...eeeeeehhhhhhhhhhhhhhhhhhhh..eeeeehhhhhhhh......eeeeeee....hhhhhhhhhhhhhh..eeeeee....hhhhhhh.eeee........-..hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhh..eeeeee......hhhhh......eeee.hhhhhhhhhhhhhhhhhhh....eeeee.......-....eeeee...hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------SIS  PDB: C:388-527 UniProt: 389-528                                                                                                        --------------------------------SIS  PDB: C:560-700 UniProt: 561-703                                                                                                          PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2put C 349 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIG-ASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIIS-DKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 700
                                   358       368       378       388       398       408       418       428       438       448       458       468       478       488       498 | |   508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658 |     668       678       688       698  
                                                                                                                                                                                 500 |                                                                                                                                                         658 |                                        
                                                                                                                                                                                   502                                                                                                                                                           660                                        

Chain D from PDB  Type:PROTEIN  Length:341
 aligned with GFA1_CANAL | P53704 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:352
                                   359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699  
           GFA1_CANAL   350 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 701
               SCOP domains d2putd_ D: automated matches                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD01 D:563-695                                                                                                                ----- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD02 D:563-695                                                                                                                ----- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD03 D:563-695                                                                                                                ----- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD04 D:563-695                                                                                                                ----- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD05 D:563-695                                                                                                                ----- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD06 D:563-695                                                                                                                ----- Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD07 D:563-695                                                                                                                ----- Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIS-2putD08 D:563-695                                                                                                                ----- Pfam domains (8)
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..ee....ee.hhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhhhhhh..eeeeehhhhhhh.......eeeeeee....hhhhhhhhhhhhhh..eeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhh.eeeeee....-----------..eeee.hhhhhhhhhhhhhhhhhh.....eeeee............eeeee...hhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------SIS  PDB: D:388-527 UniProt: 389-528                                                                                                        --------------------------------SIS  PDB: D:560-700 UniProt: 561-703                                                                                                          PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2put D 349 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGEL-----------LPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD 700
                                   358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598      |  -       618       628       638       648       658       668       678       688       698  
                                                                                                                                                                                                                                                                                          605         617                                                                                   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2PUT)

(-) Pfam Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Clan: SIS (53)
(-)
Family: SIS (23)
1aSIS-2putD01D:563-695
1bSIS-2putD02D:563-695
1cSIS-2putD03D:563-695
1dSIS-2putD04D:563-695
1eSIS-2putD05D:563-695
1fSIS-2putD06D:563-695
1gSIS-2putD07D:563-695
1hSIS-2putD08D:563-695

(-) Gene Ontology  (14, 14)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (GFA1_CANAL | P53704)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0004360    glutamine-fructose-6-phosphate transaminase (isomerizing) activity    Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.
    GO:0008483    transaminase activity    Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0006048    UDP-N-acetylglucosamine biosynthetic process    The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
    GO:1901137    carbohydrate derivative biosynthetic process    The chemical reactions and pathways resulting in the formation of carbohydrate derivative.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0006038    cell wall chitin biosynthetic process    The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.
    GO:0035690    cellular response to drug    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
    GO:0006031    chitin biosynthetic process    The chemical reactions and pathways resulting in the formation of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
    GO:0006042    glucosamine biosynthetic process    The chemical reactions and pathways resulting in the formation of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0030448    hyphal growth    Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.
    GO:0006487    protein N-linked glycosylation    A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        GFA1_CANAL | P537042poc 2puv 2puw

(-) Related Entries Specified in the PDB File

2poc THE SAME PROTEIN COMPLEXED WITH GLC-6-P AND UDP-GLCNAC
2puv THE SAME PROTEIN COMPLEXED WITH 2-AMINO-2-DEOXY-D-MANNITOL 6-PHOSPHATE AND UDP-GLCNAC
2puw THE CRYSTAL STRUCTURE OF ISOMERASE DOMAIN OF GLUCOSAMINE-6- PHOSPHATE SYNTHASE