Chain A from PDB Type:PROTEIN Length:159
aligned with MFGM_BOVIN | Q95114 from UniProtKB/Swiss-Prot Length:427
Alignment length:159
278 288 298 308 318 328 338 348 358 368 378 388 398 408 418
MFGM_BOVIN 269 GCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 427
SCOP domains d2pqsa_ A: automated matches SCOP domains
CATH domains 2pqsA00 A:0-158 Galactose-binding domain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee........hhh.eee....hhhhhhhhh.hhhhh..........ee.........eeeeeeeeeeeeeeeee.eee..eeeeeeeeeeeee......ee...........ee........eeeeeeeeeeeeeeeeeeeeee...eeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -FA58C_3 PDB: A:1-158 UniProt: 270-427 PROSITE (1)
PROSITE (2) ------------------------------------------------FA58C_1 PDB: A:48-77 ----------------------------------------------------------------FA58C_2 PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pqs A 0 VCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 158
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149
Chain B from PDB Type:PROTEIN Length:159
aligned with MFGM_BOVIN | Q95114 from UniProtKB/Swiss-Prot Length:427
Alignment length:159
278 288 298 308 318 328 338 348 358 368 378 388 398 408 418
MFGM_BOVIN 269 GCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 427
SCOP domains d2pqsb_ B: automated matches SCOP domains
CATH domains 2pqsB00 B:0-158 Galactose-binding domain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee........hhh.eee....hhhhhhhhh.hhhhh..........ee.........eeeeeeeeeeeeeeeee.eee..eeeeeeeeeeeee......ee...........ee........eeeeeeeeeeeeeeeeeeeeee...eeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -FA58C_3 PDB: B:1-158 UniProt: 270-427 PROSITE (1)
PROSITE (2) ------------------------------------------------FA58C_1 PDB: B:48-77 ----------------------------------------------------------------FA58C_2 PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pqs B 0 VCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 158
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149
Chain C from PDB Type:PROTEIN Length:159
aligned with MFGM_BOVIN | Q95114 from UniProtKB/Swiss-Prot Length:427
Alignment length:159
278 288 298 308 318 328 338 348 358 368 378 388 398 408 418
MFGM_BOVIN 269 GCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 427
SCOP domains d2pqsc_ C: automated matches SCOP domains
CATH domains 2pqsC00 C:0-158 Galactose-binding domain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee........hhh.eee........hhhhh.hhhhh..........ee.........eeeeeeeeeeeeeeeee.eee..eeeeeeeeeeeee......ee...........ee........eeeeeeeeeeeeeeeeeeeeee...eeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -FA58C_3 PDB: C:1-158 UniProt: 270-427 PROSITE (1)
PROSITE (2) ------------------------------------------------FA58C_1 PDB: C:48-77 ----------------------------------------------------------------FA58C_2 PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pqs C 0 VCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 158
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149
Chain D from PDB Type:PROTEIN Length:159
aligned with MFGM_BOVIN | Q95114 from UniProtKB/Swiss-Prot Length:427
Alignment length:159
278 288 298 308 318 328 338 348 358 368 378 388 398 408 418
MFGM_BOVIN 269 GCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 427
SCOP domains d2pqsd_ D: automated matches SCOP domains
CATH domains 2pqsD00 D:0-158 Galactose-binding domain-like CATH domains
Pfam domains (1) ----------------F5_F8_type_C-2pqsD01 D:16-155 --- Pfam domains (1)
Pfam domains (2) ----------------F5_F8_type_C-2pqsD02 D:16-155 --- Pfam domains (2)
Pfam domains (3) ----------------F5_F8_type_C-2pqsD03 D:16-155 --- Pfam domains (3)
Pfam domains (4) ----------------F5_F8_type_C-2pqsD04 D:16-155 --- Pfam domains (4)
Sec.struct. author ...ee........hhh.eee....hhhhhhhhh.hhhhh..........ee.........eeeeeeeeeeeeeeeee.eee..eeeeeeeeeeeee......ee...........ee........eeeeeeeeeeeeeeeeeeeeee...eeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -FA58C_3 PDB: D:1-158 UniProt: 270-427 PROSITE (1)
PROSITE (2) ------------------------------------------------FA58C_1 PDB: D:48-77 ----------------------------------------------------------------FA58C_2 PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pqs D 0 VCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC 158
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |