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(-) Description

Title :  STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF THE CORC/HLYC TRANSPORTER ASSOCIATED DOMAIN OF A CBS DOMAIN PROTEIN FROM CHLOROBIUM TEPIDUM TLS
 
Authors :  K. Tan, L. Volkart, S. Clancy, A. Joachimiak, Midwest Center For Str Genomics (Mcsg)
Date :  20 Apr 07  (Deposition) - 22 May 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  G,H  (1x)
Biol. Unit 4:  I,J  (1x)
Biol. Unit 5:  K  (2x)
Biol. Unit 6:  L  (2x)
Keywords :  Apc86064. 2, Corc/Hlyc Transporter Associated Domain, Cbs Domain Protein, Chlorobium Tepidum Tls, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Tan, L. Volkart, S. Clancy, A. Joachimiak
The Crystal Structure Of The Corc/Hlyc Transporter Associated Domain Of A Cbs Domain Protein From Chlorobium Tepidum Tls.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CBS DOMAIN PROTEIN
    Atcc: 49652
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PMCSG19
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: CORC/HLYC TRANSPORTER ASSOCIATED DOMAIN
    Gene: CT0541
    Organism Scientific: CHLOROBIUM TEPIDUM TLS
    Organism Taxid: 194439
    Strain: TLS, DSM 12025

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABC         
Biological Unit 2 (1x):    DEF      
Biological Unit 3 (1x):       GH    
Biological Unit 4 (1x):         IJ  
Biological Unit 5 (2x):           K 
Biological Unit 6 (2x):            L

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 65)

Asymmetric Unit (5, 65)
No.NameCountTypeFull Name
1ACT4Ligand/IonACETATE ION
2EDO13Ligand/Ion1,2-ETHANEDIOL
3FMT6Ligand/IonFORMIC ACID
4MG6Ligand/IonMAGNESIUM ION
5MSE36Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (4, 18)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2EDO6Ligand/Ion1,2-ETHANEDIOL
3FMT2Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE9Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (4, 17)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2EDO5Ligand/Ion1,2-ETHANEDIOL
3FMT1Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE9Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 6)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
3FMT-1Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (3, 10)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2EDO2Ligand/Ion1,2-ETHANEDIOL
3FMT2Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (2, 8)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
3FMT-1Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (2, 8)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
3FMT2Ligand/IonFORMIC ACID
4MG-1Ligand/IonMAGNESIUM ION
5MSE6Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (29, 29)

Asymmetric Unit (29, 29)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHOH A:934 , HOH B:814 , HOH B:834 , HOH C:839 , HOH C:842BINDING SITE FOR RESIDUE ACT A 904
02AC2SOFTWAREHOH D:913 , HOH D:924 , HOH D:925 , HOH F:769 , HOH F:782BINDING SITE FOR RESIDUE ACT D 902
03AC3SOFTWARELEU D:392 , LEU E:392 , HOH E:917 , LEU F:392 , HOH F:729BINDING SITE FOR RESIDUE ACT E 903
04AC4SOFTWAREASP G:413 , ASP G:415 , HOH G:650 , ASP H:420 , HOH H:617 , HOH H:622BINDING SITE FOR RESIDUE MG G 603
05AC5SOFTWAREASP G:420 , HOH G:614 , HOH G:644 , ASP H:413 , ASP H:415 , MG H:602 , HOH H:623BINDING SITE FOR RESIDUE MG H 601
06AC6SOFTWAREASP G:413 , ASP G:415 , ASP G:420 , ASP H:413 , ASP H:415 , ASP H:420 , MG H:601BINDING SITE FOR RESIDUE MG H 602
07AC7SOFTWAREASP I:413 , ASP I:415 , ASP I:420 , MG I:606 , ASP J:413 , ASP J:415 , ASP J:420BINDING SITE FOR RESIDUE MG I 605
08AC8SOFTWAREASP I:413 , ASP I:415 , MG I:605 , ASP J:420 , HOH J:764 , HOH J:765BINDING SITE FOR RESIDUE MG I 606
09AC9SOFTWAREASP I:420 , HOH I:841 , ASP J:413 , ASP J:415 , HOH J:762 , HOH J:763BINDING SITE FOR RESIDUE MG J 604
10BC1SOFTWAREASP K:413 , MSE K:414 , ASP K:420 , HOH K:942 , ASP L:415BINDING SITE FOR RESIDUE ACT K 901
11BC2SOFTWAREGLU A:375 , GLY A:379 , VAL A:380 , TYR A:381BINDING SITE FOR RESIDUE EDO A 706
12BC3SOFTWAREGLN A:397 , THR A:398 , HOH A:907 , VAL C:373 , GLU C:376BINDING SITE FOR RESIDUE EDO A 712
13BC4SOFTWAREGLU B:375 , GLU B:377 , GLY B:379 , VAL B:380 , TYR B:381BINDING SITE FOR RESIDUE EDO B 702
14BC5SOFTWAREGLU C:375 , GLY C:379 , VAL C:380 , TYR C:381BINDING SITE FOR RESIDUE EDO C 703
15BC6SOFTWAREVAL B:373 , GLU B:376 , GLN C:397 , THR C:398BINDING SITE FOR RESIDUE EDO C 709
16BC7SOFTWAREALA C:360 , PRO C:362 , GLU C:363 , HOH C:860BINDING SITE FOR RESIDUE EDO C 714
17BC8SOFTWAREPHE D:403 , HOH D:913 , LEU E:392 , ASP E:400 , ILE E:401 , HOH E:943 , HOH E:953BINDING SITE FOR RESIDUE EDO E 704
18BC9SOFTWAREGLU E:375 , GLY E:379 , VAL E:380 , TYR E:381BINDING SITE FOR RESIDUE EDO E 705
19CC1SOFTWAREGLU F:375 , GLY F:379 , VAL F:380 , TYR F:381 , HOH F:719BINDING SITE FOR RESIDUE EDO F 701
20CC2SOFTWAREGLN F:347 , TRP F:353 , THR F:367 , LEU F:368 , GLY F:369 , TRP F:407 , LYS F:426 , HOH F:755BINDING SITE FOR RESIDUE EDO F 710
21CC3SOFTWAREARG D:394 , TRP F:390 , LEU F:391 , HOH F:729 , HOH F:767BINDING SITE FOR RESIDUE EDO F 713
22CC4SOFTWAREGLU I:375 , GLY I:379 , VAL I:380 , TYR I:381BINDING SITE FOR RESIDUE EDO I 708
23CC5SOFTWAREASP J:350 , GLY J:351 , SER J:352 , THR J:425 , LYS J:426 , HOH J:714BINDING SITE FOR RESIDUE EDO J 711
24CC6SOFTWAREASP B:428 , ARG C:408 , GLU C:410 , ASP K:366BINDING SITE FOR RESIDUE FMT B 804
25CC7SOFTWAREGLU C:410 , VAL C:411 , ILE C:412 , HOH K:916BINDING SITE FOR RESIDUE FMT C 802
26CC8SOFTWAREGLN D:347 , ARG D:348 , GLU D:349BINDING SITE FOR RESIDUE FMT D 803
27CC9SOFTWAREARG I:348 , ASP I:350BINDING SITE FOR RESIDUE FMT I 801
28DC1SOFTWAREARG A:371 , LEU I:368 , GLY I:369 , GLU I:405 , TRP I:407 , LYS I:426BINDING SITE FOR RESIDUE FMT I 805
29DC2SOFTWAREASP L:350 , GLY L:351 , SER L:352 , THR L:425 , LYS L:426BINDING SITE FOR RESIDUE FMT L 806

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2PLS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2PLS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2PLS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2PLS)

(-) Exons   (0, 0)

(no "Exon" information available for 2PLS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains --d2plsa1 A:345-428 Hypothetical protein CT0541                                        SCOP domains
               CATH domains 2plsA00 A:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls A 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain B from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsb_ B: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsB00 B:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls B 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain C from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsc_ C: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsC00 C:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls C 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain D from PDB  Type:PROTEIN  Length:85
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:85
                                   352       362       372       382       392       402       412       422     
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKI 427
               SCOP domains d2plsd_ D: Hypothetical protein CT0541                                                SCOP domains
               CATH domains 2plsD00 D:343-427  [code=3.30.465.10, no name defined]                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                 2pls D 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKI 427
                                   352       362       372       382    | |392       402       412 |     422     
                                                                      387-MSE                    414-MSE         
                                                                        389-MSE                                  


Chain E from PDB  Type:PROTEIN  Length:85
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:85
                                   352       362       372       382       392       402       412       422     
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKI 427
               SCOP domains d2plse_ E: Hypothetical protein CT0541                                                SCOP domains
               CATH domains 2plsE00 E:343-427  [code=3.30.465.10, no name defined]                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                 2pls E 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKI 427
                                   352       362       372       382    | |392       402       412 |     422     
                                                                      387-MSE                    414-MSE         
                                                                        389-MSE                                  


Chain F from PDB  Type:PROTEIN  Length:85
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:85
                                   352       362       372       382       392       402       412       422     
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKI 427
               SCOP domains d2plsf_ F: Hypothetical protein CT0541                                                SCOP domains
               CATH domains 2plsF00 F:343-427  [code=3.30.465.10, no name defined]                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                 2pls F 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKI 427
                                   352       362       372       382    | |392       402       412 |     422     
                                                                      387-MSE                    414-MSE         
                                                                        389-MSE                                  


Chain G from PDB  Type:PROTEIN  Length:85
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:85
                                   352       362       372       382       392       402       412       422     
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKI 427
               SCOP domains d2plsg_ G: Hypothetical protein CT0541                                                SCOP domains
               CATH domains 2plsG00 G:343-427  [code=3.30.465.10, no name defined]                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                 2pls G 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKI 427
                                   352       362       372       382    | |392       402       412 |     422     
                                                                      387-MSE                    414-MSE         
                                                                        389-MSE                                  


Chain H from PDB  Type:PROTEIN  Length:85
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:90
                                   348       358       368       378       388       398       408       418       428
         Q8KEZ1_CHLTE   339 NLEDAWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d     2plsh_ H: Hypothetical protein CT0541                                                SCOP domains
               CATH domains 2     plsH00 H:344-428  [code=3.30.465.10, no name defined]                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .-----eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 2pls H 344 N-----AVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                            |     |348       358       368       378       388|      398       408     | 418       428
                          344   345                                       387-MSE                    414-MSE          
                                                                            389-MSE                                   


Chain I from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsi_ I: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsI00 I:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls I 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain J from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsj_ J: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsJ00 J:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.....hhhhh...hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls J 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain K from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsk_ K: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsK00 K:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls K 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE                                   


Chain L from PDB  Type:PROTEIN  Length:86
 aligned with Q8KEZ1_CHLTE | Q8KEZ1 from UniProtKB/TrEMBL  Length:439

    Alignment length:86
                                   352       362       372       382       392       402       412       422      
         Q8KEZ1_CHLTE   343 AWAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKVLATKID 428
               SCOP domains d2plsl_ L: Hypothetical protein CT0541                                                 SCOP domains
               CATH domains 2plsL00 L:343-428  [code=3.30.465.10, no name defined]                                 CATH domains
           Pfam domains (1) ---CorC_HlyC-2plsL01 L:346-428                                                         Pfam domains (1)
           Pfam domains (2) ---CorC_HlyC-2plsL02 L:346-428                                                         Pfam domains (2)
           Pfam domains (3) ---CorC_HlyC-2plsL03 L:346-428                                                         Pfam domains (3)
           Pfam domains (4) ---CorC_HlyC-2plsL04 L:346-428                                                         Pfam domains (4)
           Pfam domains (5) ---CorC_HlyC-2plsL05 L:346-428                                                         Pfam domains (5)
           Pfam domains (6) ---CorC_HlyC-2plsL06 L:346-428                                                         Pfam domains (6)
           Pfam domains (7) ---CorC_HlyC-2plsL07 L:346-428                                                         Pfam domains (7)
           Pfam domains (8) ---CorC_HlyC-2plsL08 L:346-428                                                         Pfam domains (8)
           Pfam domains (9) ---CorC_HlyC-2plsL09 L:346-428                                                         Pfam domains (9)
          Pfam domains (10) ---CorC_HlyC-2plsL10 L:346-428                                                         Pfam domains (10)
          Pfam domains (11) ---CorC_HlyC-2plsL11 L:346-428                                                         Pfam domains (11)
          Pfam domains (12) ---CorC_HlyC-2plsL12 L:346-428                                                         Pfam domains (12)
         Sec.struct. author ..eee.....eeee...hhhhhhhhhh.............hhhhhhhhhhh.......eeee..eeeeeeeee..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 2pls L 343 SNAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGmImWLLGRLPQTGDITFWENWRLEVIDmDSKRIDKVLATKID 428
                                   352       362       372       382    | |392       402       412 |     422      
                                                                      387-MSE                    414-MSE          
                                                                        389-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 12)

Asymmetric Unit
(-)
Clan: no clan defined [family: CorC_HlyC] (12)
(-)
Family: CorC_HlyC (12)
(-)
Chlorobium tepidum (1)
1aCorC_HlyC-2plsL01L:346-428
1bCorC_HlyC-2plsL02L:346-428
1cCorC_HlyC-2plsL03L:346-428
1dCorC_HlyC-2plsL04L:346-428
1eCorC_HlyC-2plsL05L:346-428
1fCorC_HlyC-2plsL06L:346-428
1gCorC_HlyC-2plsL07L:346-428
1hCorC_HlyC-2plsL08L:346-428
1iCorC_HlyC-2plsL09L:346-428
1jCorC_HlyC-2plsL10L:346-428
1kCorC_HlyC-2plsL11L:346-428
1lCorC_HlyC-2plsL12L:346-428

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (Q8KEZ1_CHLTE | Q8KEZ1)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0016614    oxidoreductase activity, acting on CH-OH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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