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(-) Description

Title :  ABC TRANSPORTER MODBC IN COMPLEX WITH ITS BINDING PROTEIN MODA
 
Authors :  K. Hollenstein, D. C. Frei, K. P. Locher
Date :  24 Jan 07  (Deposition) - 06 Mar 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Keywords :  Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Hollenstein, D. C. Frei, K. P. Locher
Structure Of An Abc Transporter In Complex With Its Binding Protein.
Nature V. 446 213 2007
PubMed-ID: 17322901  |  Reference-DOI: 10.1038/NATURE05626
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MOLYBDATE/TUNGSTATE ABC TRANSPORTER, ATP-BINDING PROTEIN
    Chains: A, B, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: ARCHAEOGLOBUS FULGIDUS
    Organism Taxid: 2234
    Synonym: CYSA, AF0092, MODC
 
Molecule 2 - MOLYBDATE/TUNGSTATE ABC TRANSPORTER, PERMEASE PROTEIN
    Chains: C, D, H, I
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: ARCHAEOGLOBUS FULGIDUS
    Organism Taxid: 2234
    Synonym: CYST, AF0093, MODB
 
Molecule 3 - MOLYBDATE/TUNGSTATE BINDING PROTEIN
    Chains: E, J
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: ARCHAEOGLOBUS FULGIDUS
    Organism Taxid: 2234

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit : ABCDEFGHIJ
Biological Unit 1 (1x): ABCDE     
Biological Unit 2 (1x):      FGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric Unit (3, 12)
No.NameCountTypeFull Name
1MG6Ligand/IonMAGNESIUM ION
2PO44Ligand/IonPHOSPHATE ION
3WO42Ligand/IonTUNGSTATE(VI)ION
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2PO42Ligand/IonPHOSPHATE ION
3WO41Ligand/IonTUNGSTATE(VI)ION
Biological Unit 2 (2, 3)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2PO42Ligand/IonPHOSPHATE ION
3WO41Ligand/IonTUNGSTATE(VI)ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA E:40 , GLY E:41 , SER E:42 , GLY E:69 , SER E:70 , ALA E:90 , ASP E:153 , PRO E:154 , CYS E:155 , GLU E:218 , TYR E:236BINDING SITE FOR RESIDUE WO4 E 701
02AC2SOFTWAREALA J:40 , GLY J:41 , SER J:42 , GLY J:69 , SER J:70 , ALA J:90 , ASP J:153 , PRO J:154 , CYS J:155 , GLU J:218 , TYR J:236BINDING SITE FOR RESIDUE WO4 J 702
03AC3SOFTWAREPRO A:32 , GLY A:34 , ALA A:35 , GLY A:36 , LYS A:37 , SER A:38 , MG A:701BINDING SITE FOR RESIDUE PO4 A 801
04AC4SOFTWAREPRO B:32 , GLY B:34 , ALA B:35 , GLY B:36 , LYS B:37 , SER B:38 , MG B:702BINDING SITE FOR RESIDUE PO4 B 802
05AC5SOFTWAREPRO F:32 , GLY F:34 , ALA F:35 , GLY F:36 , LYS F:37 , SER F:38 , MG F:703BINDING SITE FOR RESIDUE PO4 F 803
06AC6SOFTWAREPRO G:32 , GLY G:34 , ALA G:35 , GLY G:36 , LYS G:37 , SER G:38 , MG G:704BINDING SITE FOR RESIDUE PO4 G 804
07AC7SOFTWARESER A:38 , GLN A:77 , ASP A:151 , PO4 A:801BINDING SITE FOR RESIDUE MG A 701
08AC8SOFTWARESER B:38 , GLN B:77 , ASP B:151 , PO4 B:802BINDING SITE FOR RESIDUE MG B 702
09AC9SOFTWARESER F:38 , GLN F:77 , ASP F:151 , PO4 F:803BINDING SITE FOR RESIDUE MG F 703
10BC1SOFTWARESER G:38 , GLN G:77 , ASP G:151 , PO4 G:804BINDING SITE FOR RESIDUE MG G 704
11BC2SOFTWAREGLU E:167 , PRO E:173 , ASP E:177BINDING SITE FOR RESIDUE MG E 705
12BC3SOFTWAREGLU J:167 , PRO J:173 , ASP J:177BINDING SITE FOR RESIDUE MG J 706

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ONK)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Tyr E:100 -Pro E:101
2Val E:324 -Pro E:325
3Tyr J:100 -Pro J:101
4Val J:324 -Pro J:325

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ONK)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TM1PS50928 ABC transporter integral membrane type-1 domain profile.WTPB_ARCFU51-247
 
 
 		  4C:51-247
D:51-247
H:51-247
I:51-247
2ABC_TRANSPORTER_1PS00211 ABC transporters family signature.WTPC_ARCFU127-141
 
 
 		  4A:127-141
B:127-141
F:127-141
G:127-141
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TM1PS50928 ABC transporter integral membrane type-1 domain profile.WTPB_ARCFU51-247
 
 
 		  2C:51-247
D:51-247
-
-
2ABC_TRANSPORTER_1PS00211 ABC transporters family signature.WTPC_ARCFU127-141
 
 
 		  2A:127-141
B:127-141
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TM1PS50928 ABC transporter integral membrane type-1 domain profile.WTPB_ARCFU51-247
 
 
 		  2-
-
H:51-247
I:51-247
2ABC_TRANSPORTER_1PS00211 ABC transporters family signature.WTPC_ARCFU127-141
 
 
 		  2-
-
F:127-141
G:127-141

(-) Exons   (0, 0)

(no "Exon" information available for 2ONK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:240
 aligned with WTPC_ARCFU | O30144 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
           WTPC_ARCFU     1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
               SCOP domains d2onka1 A:1-240 Molybdate/tungstate import ATP-binding protein WtpC (ModC)                                                                                                                                                                       SCOP domains
               CATH domains 2onkA00 A:1-240 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeee...eeeee.....hhhhhhhhhhh.....eeeeee..ee........................hhhhhhhh.....hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh......eee......hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh...hhhhhh.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER--------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk A   1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain B from PDB  Type:PROTEIN  Length:240
 aligned with WTPC_ARCFU | O30144 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
           WTPC_ARCFU     1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
               SCOP domains d2onkb_ B: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains 2onkB00 B:1-240 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeee...eeeee.....hhhhhhhhhhh.....eeeeee..ee........................hhhhhhhh.....hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh......eee......hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh...hhhhhh.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER--------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk B   1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain C from PDB  Type:PROTEIN  Length:252
 aligned with WTPB_ARCFU | O30143 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  
           WTPB_ARCFU     1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
               SCOP domains d2onkc1 C:1-252 Molybdate/tungstate transport system permease protein WtpB (ModB)                                                                                                                                                                            SCOP domains
               CATH domains 2onkC00 C:1-252 MetI-like domain                                                                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------ABC_TM1  PDB: C:51-247 UniProt: 51-247                                                                                                                                                               ----- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk C   1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  


Chain D from PDB  Type:PROTEIN  Length:252
 aligned with WTPB_ARCFU | O30143 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  
           WTPB_ARCFU     1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
               SCOP domains d2onkd1 D:1-252 Molybdate/tungstate transport system permease protein WtpB (ModB)                                                                                                                                                                            SCOP domains
               CATH domains 2onkD00 D:1-252 MetI-like domain                                                                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------ABC_TM1  PDB: D:51-247 UniProt: 51-247                                                                                                                                                               ----- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk D   1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  


Chain E from PDB  Type:PROTEIN  Length:311
 aligned with WTPA_ARCFU | O30142 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:311
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 
           WTPA_ARCFU    32 NVKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMFAKNQIVLAYRNDSRYADEINSQNWYEILKRPDVRFGFSNPNDDPCGYRSLMAIQLAELYYNDPTIFDELVAKNSNLRFSEDNGSYVLRMPSSERIEINKSKIMIRSMEMELIHLVESGELDYFFIYKSVAKQHGFNFVELPVEIDLSSPDYAELYSKVKVVLANGKEVTGKPIVYGITIPKNAENRELAVEFVKLVISEEGQEILRELGQEPLVPPRADTAVPSLKAMVEVS 342
               SCOP domains d2onke1 E:32-342 Molybdate-binding protein, ModA                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 2onkE01 E:32-112,E:284-342 Periplasmic binding protein-like II                   2onkE02 E:113-283 Periplasmic binding protein-like II                                                                                                                      2onkE01 E:32-112,E:284-342                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhh......eeee.hhhhhhhhhh.......eeeeee.eeeee.............hhhhhh......eeee....hhhhhhhhhhhhhhhhhh...hhhhhhhhhhh...eeee..eeeee.............eeee...hhhhhhhhh....eeeeehhhhhhh..eee.........hhhhhhhhh.eeeee...eeee...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee...hhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2onk E  32 NVKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMFAKNQIVLAYRNDSRYADEINSQNWYEILKRPDVRFGFSNPNDDPCGYRSLMAIQLAELYYNDPTIFDELVAKNSNLRFSEDNGSYVLRMPSSERIEINKSKIMIRSMEMELIHLVESGELDYFFIYKSVAKQHGFNFVELPVEIDLSSPDYAELYSKVKVVLANGKEVTGKPIVYGITIPKNAENRELAVEFVKLVISEEGQEILRELGQEPLVPPRADTAVPSLKAMVEVS 342
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 


Chain F from PDB  Type:PROTEIN  Length:240
 aligned with WTPC_ARCFU | O30144 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
           WTPC_ARCFU     1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
               SCOP domains d2onkf_ F: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains 2onkF00 F:1-240 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeee...eeeee.....hhhhhhhhhhh.....eeeeee..ee........................hhhhhhhh.....hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh......eee......hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh...hhhhhh.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER--------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk F   1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain G from PDB  Type:PROTEIN  Length:240
 aligned with WTPC_ARCFU | O30144 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
           WTPC_ARCFU     1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
               SCOP domains d2onkg_ G: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains 2onkG00 G:1-240 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                             CATH domains
           Pfam domains (1) -------------------------------------ABC_tran-2onkG01 G:38-155                                                                                             ------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------ABC_tran-2onkG02 G:38-155                                                                                             ------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------ABC_tran-2onkG03 G:38-155                                                                                             ------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------ABC_tran-2onkG04 G:38-155                                                                                             ------------------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author ..eeeeeeeee..eeeeeeeee...eeeee.....hhhhhhhhhhh.....eeeeee..ee........................hhhhhhhh.....hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh......eee......hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh...hhhhhh.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER--------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk G   1 MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain H from PDB  Type:PROTEIN  Length:252
 aligned with WTPB_ARCFU | O30143 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  
           WTPB_ARCFU     1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
               SCOP domains d2onkh1 H:1-252 Molybdate/tungstate transport system permease protein WtpB (ModB)                                                                                                                                                                            SCOP domains
               CATH domains 2onkH00 H:1-252 MetI-like domain                                                                                                                                                                                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------ABC_TM1  PDB: H:51-247 UniProt: 51-247                                                                                                                                                               ----- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk H   1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  


Chain I from PDB  Type:PROTEIN  Length:252
 aligned with WTPB_ARCFU | O30143 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  
           WTPB_ARCFU     1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
               SCOP domains d2onki1 I:1-252 Molybdate/tungstate transport system permease protein WtpB (ModB)                                                                                                                                                                            SCOP domains
               CATH domains 2onkI00 I:1-252 MetI-like domain                                                                                                                                                                                                                             CATH domains
           Pfam domains (1) --------------------------------------------------------------------BPD_transp_1-2onkI01 I:69-252                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------BPD_transp_1-2onkI02 I:69-252                                                                                                                                                            Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------------------BPD_transp_1-2onkI03 I:69-252                                                                                                                                                            Pfam domains (3)
           Pfam domains (4) --------------------------------------------------------------------BPD_transp_1-2onkI04 I:69-252                                                                                                                                                            Pfam domains (4)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------ABC_TM1  PDB: I:51-247 UniProt: 51-247                                                                                                                                                               ----- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2onk I   1 MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG 252
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250  


Chain J from PDB  Type:PROTEIN  Length:310
 aligned with WTPA_ARCFU | O30142 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:334
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334    
           WTPA_ARCFU     5 GGVVKIRILILLMLALFLLGCSSNVNTNVKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMFAKNQIVLAYRNDSRYADEINSQNWYEILKRPDVRFGFSNPNDDPCGYRSLMAIQLAELYYNDPTIFDELVAKNSNLRFSEDNGSYVLRMPSSERIEINKSKIMIRSMEMELIHLVESGELDYFFIYKSVAKQHGFNFVELPVEIDLSSPDYAELYSKVKVVLANGKEVTGKPIVYGITIPKNAENRELAVEFVKLVISEEGQEILRELGQEPLVPPRADTAVPSLKAM 338
               SCOP domains d                        2onkj_ J: Molybdate-binding protein, ModA                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains 2                        onkJ01 J:29-112,J:284-338 Periplasmic binding protein-like II                      2onkJ02 J:113-283 Periplasmic binding protein-like II                                                                                                                      2onkJ01 J:29-112,J:284-338                              CATH domains
           Pfam domains (1) -----------------------------------SBP_bac_1-2onkJ01 J:40-313                                                                                                                                                                                                                                                        ------------------------- Pfam domains (1)
           Pfam domains (2) -----------------------------------SBP_bac_1-2onkJ02 J:40-313                                                                                                                                                                                                                                                        ------------------------- Pfam domains (2)
         Sec.struct. author .------------------------....eeeeee...hhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhh......eeee.hhhhhhhhhh.......eeeeee.eeeee.............hhhhhh......eeee....hhhhhhhhhhhhhhhhhh...hhhhhhhhhhh...eeee..eeeee.............eeee...hhhhhhhhh....eeeeehhhhhhh..eee.........hhhhhhhhh.eeeee...eeee...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2onk J  29 G------------------------HMNVKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMFAKNQIVLAYRNDSRYADEINSQNWYEILKRPDVRFGFSNPNDDPCGYRSLMAIQLAELYYNDPTIFDELVAKNSNLRFSEDNGSYVLRMPSSERIEINKSKIMIRSMEMELIHLVESGELDYFFIYKSVAKQHGFNFVELPVEIDLSSPDYAELYSKVKVVLANGKEVTGKPIVYGITIPKNAENRELAVEFVKLVISEEGQEILRELGQEPLVPPRADTAVPSLKAM 338
                            |        -         -     |  34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334    
                           29                       30
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 10)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Class: Membrane and cell surface proteins and peptides (2046)

(-) CATH Domains  (3, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (3, 10)

Asymmetric Unit
(-)
Clan: BPD_transp_1 (5)
(-)
Clan: P-loop_NTPase (1112)
(-)
Clan: PBP (391)

(-) Gene Ontology  (12, 18)

Asymmetric Unit(hide GO term definitions)
Chain A,B,F,G   (WTPC_ARCFU | O30144)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016887    ATPase activity    Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
    GO:0015412    ATPase-coupled molybdate transmembrane transporter activity    Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + molybdate(out) = ADP + phosphate + molybdate(in).
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0015689    molybdate ion transport    The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain C,D,H,I   (WTPB_ARCFU | O30143)
biological process
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain E,J   (WTPA_ARCFU | O30142)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:1901359    tungstate binding    Interacting selectively and non-covalently with tungstate.
biological process
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        WTPA_ARCFU | O30142: 2onr 2ons 3cij

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2ONK)