Chain A from PDB Type:PROTEIN Length:185
aligned with ABEC2_HUMAN | Q9Y235 from UniProtKB/Swiss-Prot Length:224
Alignment length:210
24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224
ABEC2_HUMAN 15 SQNGEDLENLDDPEKLKELIELPPFEIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....---------------------.......hhhhhhhh.............eeeeeeeeee.....eeeeeeeeee.....hhhhhhhhhh........eeeeeeeeee..hhhhhhhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhh....----......hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------CYT_DCMP_DEAMINASES_2 PDB: A:64-169 UniProt: 64-169 ------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.1b PDB: A:36-44 (gaps)------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) -----------------------------Exon 1.2b PDB: A:44-224 (gaps) UniProt: 44-224 Transcript 1 (2)
2nyt A 36 SGGG---------------------MIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEE----AFQPWEDIQENFLYYEEKLADILK 224
| - - | 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 | |204 214 224
39 40 196 201
Chain B from PDB Type:PROTEIN Length:190
aligned with ABEC2_HUMAN | Q9Y235 from UniProtKB/Swiss-Prot Length:224
Alignment length:211
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
ABEC2_HUMAN 14 ASQNGEDLENLDDPEKLKELIELPPFEIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....---------------------.......hhhhhh......eeee..eeeeeeeeeeeee.....eeeeeeeeeeeee..hhhhhhhhhh........eeeeeeeeee..hhhhhhhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhhhhh..eeee.hhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------CYT_DCMP_DEAMINASES_2 PDB: B:64-169 UniProt: 64-169 ------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.1b PDB: B:35-44 (gaps) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) ------------------------------Exon 1.2b PDB: B:44-224 UniProt: 44-224 Transcript 1 (2)
2nyt B 35 GSGGG---------------------MIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
| - - | 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
39 40
Chain C from PDB Type:PROTEIN Length:185
aligned with ABEC2_HUMAN | Q9Y235 from UniProtKB/Swiss-Prot Length:224
Alignment length:185
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219
ABEC2_HUMAN 40 EIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhh.............eeeeeeeeee.....eeeeeeeeee.....hhhhhhhhhh........eeeeeeeeee..hhhhhhhhhhhhh....eeeeeeeee.....hhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------CYT_DCMP_DEAMINASES_2 PDB: C:64-169 UniProt: 64-169 ------------------------------------------------------- PROSITE
Transcript 1 (1) 1.1b ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) ----Exon 1.2b PDB: C:44-224 UniProt: 44-224 Transcript 1 (2)
2nyt C 40 MIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219
Chain D from PDB Type:PROTEIN Length:179
aligned with ABEC2_HUMAN | Q9Y235 from UniProtKB/Swiss-Prot Length:224
Alignment length:185
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219
ABEC2_HUMAN 40 EIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -----------------------------------------------------------------------------------------------------------------------APOBEC_C-2nytD01 D:159-216 -------- Pfam domains (1)
Pfam domains (2) -----------------------------------------------------------------------------------------------------------------------APOBEC_C-2nytD02 D:159-216 -------- Pfam domains (2)
Pfam domains (3) -----------------------------------------------------------------------------------------------------------------------APOBEC_C-2nytD03 D:159-216 -------- Pfam domains (3)
Pfam domains (4) -----------------------------------------------------------------------------------------------------------------------APOBEC_C-2nytD04 D:159-216 -------- Pfam domains (4)
Sec.struct. author .......hhhhhh......eeee..eeeeeeeeeeeee.....eeeeeeeeeeeee..hhhhhhhhhh........eeeeeeee....hhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhh..eeee.hhhhhhhhhhhh....------.....hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------CYT_DCMP_DEAMINASES_2 PDB: D:64-169 UniProt: 64-169 ------------------------------------------------------- PROSITE
Transcript 1 (1) 1.1b ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) ----Exon 1.2b PDB: D:44-224 (gaps) UniProt: 44-224 Transcript 1 (2)
2nyt D 40 MIVTGERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQE------FQPWEDIQENFLYYEEKLADILK 224
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 | - | 209 219
195 202
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |