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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN RHA04536 FROM RHODOCOCCUS SP
 
Authors :  C. Chang, T. Skarina, O. Onopriyenko, A. Savchenko, A. M. Edwards, A. Jo Midwest Center For Structural Genomics (Mcsg)
Date :  02 Nov 06  (Deposition) - 05 Dec 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Rhodococcus Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, T. Skarina, O. Onopriyenko, A. Savchenko, A. M. Edwards, A. Joachimiak
Crystal Structure Of Protein Rha04536 From Rhodococcus Sp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET DERIVATIVE
    Expression System Strain: BL21(DE3) DERIVATIVE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: RHODOCOCCUS SP.
    Organism Taxid: 101510
    Strain: RHA1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL
2GOL1Ligand/IonGLYCEROL
3MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMSE A:1 , THR A:2BINDING SITE FOR RESIDUE EDO A 102
2AC2SOFTWARELEU A:16 , ASP A:17 , ARG A:19 , ALA A:20 , ASP A:21 , LYS A:64 , TRP A:81 , HOH A:129 , HOH A:188BINDING SITE FOR RESIDUE GOL A 101

(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:85
 aligned with Q0S2K3_RHOJR | Q0S2K3 from UniProtKB/TrEMBL  Length:85

    Alignment length:85
                                    10        20        30        40        50        60        70        80     
          Q0S2K3_RHOJR    1 MTVSDRELEECIRALLDARADSASICPSDVARAVAPDDWRPLMEPVREAAGRLADAGEVEVTQKGAVVDPRSARGPIRIRWTRTD 85
               SCOP domains d2ns0a1 A:1-85 Hypothetical protein RHA1_ro06458                                      SCOP domains
               CATH domains -2ns0A00 A:2-85 'winged helix' repressor DNA binding domain                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh......hhhhhhhhhh...hhhhhhhhhhhhhhhhhh..eeeee..ee..........eeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                  2ns0 A  1 mTVSDRELEECIRALLDARADSASICPSDVARAVAPDDWRPLmEPVREAAGRLADAGEVEVTQKGAVVDPRSARGPIRIRWTRTD 85
                            |       10        20        30        40  |     50        60        70        80     
                            |                                        43-MSE                                      
                            1-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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