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(-) Description

Title :  APO SOLUTION STRUCTURE OF HOP TPR2A
 
Authors :  J. F. Darby, L. R. Vidler, P. J. Simpson, S. J. Matthews, S. Y. Sharp, L. H. S. Hoelder, P. Workman
Date :  23 Mar 16  (Deposition) - 29 Mar 17  (Release) - 29 Mar 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Chaperone, Heat-Shock, Hsp90, Tpr (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. F. Darby, L. R. Vidler, P. J. Simpson, S. J. Matthews, S. Y. Sharp, L. H. Pearl, S. Hoelder, P. Workman
Solution Structure Of The Hop Tpr 2A Domain And Validation Of Novel Approaches To Inhibitor Indentification By Nmr, Biochemical And In Silico Screening
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - STRESS-INDUCED-PHOSPHOPROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 469008
    Expression System Variant: DE3 (PLYSS)
    Expression System Vector: PTWO-E
    Fragment: RESIDUES 280-350
    Gene: STIP1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: PTWO-E BASE ON PET17-B VECTOR
    Synonym: STI1, HSC70/HSP90-ORGANIZING PROTEIN, HOP, RENAL CARCINOMA ANTIGEN NY-REN-11, TRANSFORMATION-SENSITIVE PROTEIN IEF SSP 3521

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2NC9)

(-) Sites  (0, 0)

(no "Site" information available for 2NC9)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NC9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2NC9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NC9)

(-) PROSITE Motifs  (2, 4)

NMR Structure (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.STIP1_HUMAN4-37
38-71
72-105
225-258
259-292
300-333
360-393
394-427
428-461		  3-
-
-
A:14-47
A:48-81
A:89-122
-
-
-
2TPR_REGIONPS50293 TPR repeat region circular profile.STIP1_HUMAN4-105
225-461		  1-
A:14-139
NMR Structure * (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TPRPS50005 TPR repeat profile.STIP1_HUMAN4-37
38-71
72-105
225-258
259-292
300-333
360-393
394-427
428-461		  3-
-
-
A:14-47
A:48-81
A:89-122
-
-
-
2TPR_REGIONPS50293 TPR repeat region circular profile.STIP1_HUMAN4-105
225-461		  1-
A:14-139

(-) Exons   (0, 0)

(no "Exon" information available for 2NC9)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:131
                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nc9 A   9 ENKKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQE 139
                                    18        28        38        48        58        68        78        88        98       108       118       128       138
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NC9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NC9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2NC9)

(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)

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  2nc9
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  STIP1_HUMAN | P31948
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STIP1_HUMAN | P31948: 1elr 1elw 2lni 3esk 3fwv

(-) Related Entries Specified in the PDB File

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