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(-) Description

Title :  DNA-ARCHEAL MC1 PROTEIN COMPLEX STRUCTURE BY NMR
 
Authors :  F. Paquet, K. Loth, C. Landon
Date :  25 Feb 16  (Deposition) - 01 Mar 17  (Release) - 01 Mar 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B,C  (12x)
NMR Structure *:  A,B,C  (1x)
Keywords :  Dna-Protein Complex, Bent Dna, Archaea, Dna Binding Protein-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Paquet, K. Loth, C. Landon
First 3D Structure Of An Atypical Protein-Dna Complex
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CHROMOSOMAL PROTEIN MC1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET24A-MC1
    Gene: MSTHC_1630
    Organism Scientific: METHANOSARCINA THERMOPHILA CHTI-55
    Organism Taxid: 1434121
    Strain: CHTI55
 
Molecule 2 - DNA (5'-D(*AP*AP*AP*AP*AP*CP*AP*CP*AP*CP*AP*CP*CP*CP*A)- 3')
    Chains: B
    Engineered: YES
    Synthetic: YES
 
Molecule 3 - DNA (5'-D(P*TP*GP*GP*GP*TP*GP*TP*GP*TP*GP*TP*TP*TP*TP*T)- 3')
    Chains: C
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
NMR Structure (12x): ABC
NMR Structure * (1x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2NBJ)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:93
                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee.....eeeeeee.hhhhhhhhhhhhh........eeeeeee....eeeeeeeeeeee...........eeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                  2nbj A  1 SNTRNFVLRDEDGNEHGVFTGKQPRQAALKAANRGSGTKANPDIIRLRERGTKKVHVFKAWKEIVDAPKNRPAWMPEKISKPFVKKERIEKLE 93
                                    10        20        30        40        50        60        70        80        90   


Chain B from PDB  Type:DNA  Length:15
                                              
                  2nbj B  1 AAAAACACACACCCA 15
                                    10     


Chain C from PDB  Type:DNA  Length:15
                                              
                  2nbj C 16 TGGGTGTGTGTTTTT 30
                                    25
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HMC1_METTE | P12770: 1t23 2khl

(-) Related Entries Specified in the PDB File

2khl 3D STRUCTURE OF THE FREE MC1 PROTEIN