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(-) Description

Title :  NMR STRUCTURE OF THE C-TERMINAL COILED-COIL DOMAIN OF CIN85
 
Authors :  M. Habeck, S. Becker, C. Griesinger, L. E. Wong
Date :  11 Aug 15  (Deposition) - 13 Jul 16  (Release) - 13 Jul 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B,C  (30x)
NMR Structure *:  A,B,C  (1x)
Keywords :  Signaling Protein, Adaptor Protein, Coiled-Coil Domain, B-Cell Antigen Receptor Signaling (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Kuhn, L. E. Wong, S. Pirkuliyeva, K. Schulz, C. Schwiegk, K. G. Funfgeld, S. Keppler, F. D. Batista, H. Urlaub, M. Habeck, S. Becker, C. Griesinger, J. Wienands
The Adaptor Protein Cin85 Assembles Intracellular Signaling Clusters For B Cell Activation.
Sci. Signal. V. 9 Ra66 2016
PubMed-ID: 27353366  |  Reference-DOI: 10.1126/SCISIGNAL.AAD6275

(-) Compounds

Molecule 1 - SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET16B
    Fragment: COILED COIL DOMAIN RESIDUES 594-665
    Gene: SH3KBP1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CD2-BINDING PROTEIN 3, CD2BP3, CBL-INTERACTING PROTEIN OF 85 KDA, HUMAN SRC FAMILY KINASE-BINDING PROTEIN 1, HSB-1

 Structural Features

(-) Chains, Units

  123
NMR Structure (30x): ABC
NMR Structure * (1x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N64)

(-) Sites  (0, 0)

(no "Site" information available for 2N64)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N64)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N64)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N64)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N64)

(-) Exons   (0, 0)

(no "Exon" information available for 2N64)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:75
                                                                                                           
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                 2n64 A 591 GHMEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLSELDEEKKIRLRLQMEVNDIKKALQSK 665
                                   600       610       620       630       640       650       660     


Chain B from PDB  Type:PROTEIN  Length:75
                                                                                                           
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                 2n64 B 591 GHMEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLSELDEEKKIRLRLQMEVNDIKKALQSK 665
                                   600       610       620       630       640       650       660     


Chain C from PDB  Type:PROTEIN  Length:75
                                                                                                           
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                 2n64 C 591 GHMEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLSELDEEKKIRLRLQMEVNDIKKALQSK 665
                                   600       610       620       630       640       650       660
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N64)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N64)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N64)

(-) Gene Ontology  (22, 22)

NMR Structure(hide GO term definitions)

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  SH3K1_HUMAN | Q96B97
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SH3K1_HUMAN | Q96B97: 2bz8 2k6d 2k9g 2o2o 2ydl 5abs

(-) Related Entries Specified in the PDB File

5abs ENTRY CONTAINING X-RAY CRYSTAL STRUCTURE OF THE SAME DOMAIN. RELATED ID: 25750 RELATED DB: BMRB