Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)NMR Structure - model 1
(-)NMR Structure - model 1, sites
(-)NMR Structure - all models
collapse expand < >
Image NMR Structure - model 1
NMR Structure - model 1  (Jmol Viewer)
Image NMR Structure - model 1, sites
NMR Structure - model 1, sites  (Jmol Viewer)
Image NMR Structure - all models
NMR Structure - all models  (Jmol Viewer)

(-) Description

Title :  NMR SOLUTION STRUCTURE OF THE PRO FORM OF HUMAN MATRILYSIN (PROMMP-7) IN COMPLEX WITH ANIONIC MEMBRANE
 
Authors :  S. H. Prior, S. R. Van Doren
Date :  12 Feb 15  (Deposition) - 28 Sep 16  (Release) - 28 Sep 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Zymogen, Hydrolase, Membrane-Bound Form, Metalloenzyme, Anionic (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. H. Prior, Y. G. Fulcher, R. K. Koppisetti, A. Jurkevich, S. R. Van Doren
Charge-Triggered Membrane Insertion Of Matrix Metalloproteinase-7, Supporter Of Innate Immunity And Tumors.
Structure V. 23 2099 2015
PubMed-ID: 26439767  |  Reference-DOI: 10.1016/J.STR.2015.08.013

(-) Compounds

Molecule 1 - MATRILYSIN
    Chains: A
    EC Number: 3.4.24.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET28-A
    Gene: MMP7, MPSL1, PUMP1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: MATRIN, MATRIX METALLOPROTEINASE-7, MMP-7, PUMP-1 PROTEASE, UTERINE METALLOPROTEINASE

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 136)

NMR Structure (4, 136)
No.NameCountTypeFull Name
1C3S6Ligand/IonCHOLEST-5-EN-3-YL HYDROGEN SULFATE
2CA2Ligand/IonCALCIUM ION
3PX4126Ligand/Ion1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
4ZN2Ligand/IonZINC ION
NMR Structure * (2, 132)
No.NameCountTypeFull Name
1C3S6Ligand/IonCHOLEST-5-EN-3-YL HYDROGEN SULFATE
2CA-1Ligand/IonCALCIUM ION
3PX4126Ligand/Ion1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
4ZN-1Ligand/IonZINC ION

(-) Sites  (132, 132)

NMR Structure (132, 132)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREASP A:133 , GLY A:165 , GLY A:167 , ASP A:169BINDING SITE FOR RESIDUE CA A 301
002AC2SOFTWAREPHE A:149 , ASP A:150 , GLY A:151 , GLY A:153 , THR A:155 , ASP A:173 , GLU A:176BINDING SITE FOR RESIDUE CA A 302
003AC3SOFTWAREHIS A:143 , ASP A:145 , HIS A:158 , HIS A:171BINDING SITE FOR RESIDUE ZN A 303
004AC4SOFTWARECYS A:67 , ASP A:71 , HIS A:194 , HIS A:198 , HIS A:204BINDING SITE FOR RESIDUE ZN A 304
005AC5SOFTWAREPX4 A:311 , PX4 A:312 , PX4 A:324 , PX4 A:340 , PX4 A:363 , C3S A:431 , C3S A:432BINDING SITE FOR RESIDUE PX4 A 305
006AC6SOFTWARETHR A:85 , SER A:86 , LYS A:87 , VAL A:88 , ARG A:125 , PX4 A:318 , PX4 A:321 , PX4 A:342 , PX4 A:358 , PX4 A:359BINDING SITE FOR RESIDUE PX4 A 306
007AC7SOFTWARELYS A:118 , PX4 A:322 , PX4 A:332 , PX4 A:337 , PX4 A:344 , PX4 A:369 , PX4 A:423BINDING SITE FOR RESIDUE PX4 A 307
008AC8SOFTWAREPX4 A:320 , PX4 A:326 , PX4 A:334BINDING SITE FOR RESIDUE PX4 A 308
009AC9SOFTWAREPX4 A:345 , PX4 A:347 , PX4 A:351BINDING SITE FOR RESIDUE PX4 A 309
010BC1SOFTWAREPX4 A:364 , PX4 A:414BINDING SITE FOR RESIDUE PX4 A 310
011BC2SOFTWAREPX4 A:305 , PX4 A:324 , PX4 A:363 , PX4 A:377BINDING SITE FOR RESIDUE PX4 A 311
012BC3SOFTWAREPX4 A:305 , PX4 A:324 , PX4 A:339 , PX4 A:346 , PX4 A:363 , PX4 A:388BINDING SITE FOR RESIDUE PX4 A 312
013BC4SOFTWAREPX4 A:355 , PX4 A:362 , PX4 A:415BINDING SITE FOR RESIDUE PX4 A 313
014BC5SOFTWAREPX4 A:335 , PX4 A:336 , PX4 A:354BINDING SITE FOR RESIDUE PX4 A 314
015BC6SOFTWAREARG A:107 , SER A:110 , LYS A:111 , LYS A:126 , ASN A:223 , PHE A:224 , PX4 A:332 , PX4 A:337 , PX4 A:350BINDING SITE FOR RESIDUE PX4 A 315
016BC7SOFTWARETRP A:129 , GLY A:130 , PX4 A:321 , PX4 A:343 , PX4 A:352 , PX4 A:396BINDING SITE FOR RESIDUE PX4 A 316
017BC8SOFTWAREGLN A:222 , ASN A:223 , PX4 A:325 , PX4 A:326 , PX4 A:330 , PX4 A:361BINDING SITE FOR RESIDUE PX4 A 317
018BC9SOFTWAREPX4 A:306 , PX4 A:321 , PX4 A:342 , PX4 A:352 , PX4 A:357 , PX4 A:358BINDING SITE FOR RESIDUE PX4 A 318
019CC1SOFTWAREPX4 A:343 , PX4 A:352BINDING SITE FOR RESIDUE PX4 A 319
020CC2SOFTWAREILE A:103 , ARG A:107 , PX4 A:308 , PX4 A:326 , PX4 A:334 , PX4 A:418BINDING SITE FOR RESIDUE PX4 A 320
021CC3SOFTWARETHR A:90 , TRP A:129 , THR A:131 , PX4 A:306 , PX4 A:316 , PX4 A:318 , PX4 A:342 , PX4 A:375BINDING SITE FOR RESIDUE PX4 A 321
022CC4SOFTWAREPX4 A:307 , PX4 A:331 , PX4 A:344 , PX4 A:398BINDING SITE FOR RESIDUE PX4 A 322
023CC5SOFTWAREPX4 A:328 , PX4 A:353BINDING SITE FOR RESIDUE PX4 A 323
024CC6SOFTWAREPX4 A:305 , PX4 A:311 , PX4 A:312 , PX4 A:333 , PX4 A:334 , PX4 A:388 , PX4 A:414 , C3S A:431BINDING SITE FOR RESIDUE PX4 A 324
025CC7SOFTWAREGLN A:222 , PX4 A:317 , PX4 A:329 , PX4 A:330 , PX4 A:353 , PX4 A:355 , PX4 A:382BINDING SITE FOR RESIDUE PX4 A 325
026CC8SOFTWAREPX4 A:308 , PX4 A:317 , PX4 A:320 , PX4 A:361BINDING SITE FOR RESIDUE PX4 A 326
027CC9SOFTWAREGLY A:117 , LYS A:118 , ILE A:120 , LEU A:122 , PX4 A:332 , PX4 A:348 , PX4 A:359 , PX4 A:394BINDING SITE FOR RESIDUE PX4 A 327
028DC1SOFTWAREPX4 A:323BINDING SITE FOR RESIDUE PX4 A 328
029DC2SOFTWAREPX4 A:325BINDING SITE FOR RESIDUE PX4 A 329
030DC3SOFTWAREGLN A:222 , ASN A:223 , PX4 A:317 , PX4 A:325 , PX4 A:331 , PX4 A:337 , PX4 A:355 , PX4 A:362BINDING SITE FOR RESIDUE PX4 A 330
031DC4SOFTWAREPX4 A:322 , PX4 A:330 , PX4 A:337 , PX4 A:344 , PX4 A:362BINDING SITE FOR RESIDUE PX4 A 331
032DC5SOFTWAREARG A:107 , ASN A:114 , PX4 A:307 , PX4 A:315 , PX4 A:327 , PX4 A:348 , PX4 A:350BINDING SITE FOR RESIDUE PX4 A 332
033DC6SOFTWAREPX4 A:324 , PX4 A:334 , PX4 A:340 , PX4 A:364 , PX4 A:389 , C3S A:432BINDING SITE FOR RESIDUE PX4 A 333
034DC7SOFTWAREASP A:99 , PRO A:101 , ARG A:177 , PX4 A:308 , PX4 A:320 , PX4 A:324 , PX4 A:333 , PX4 A:417 , C3S A:431 , C3S A:432 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 334
035DC8SOFTWAREPX4 A:314 , PX4 A:360BINDING SITE FOR RESIDUE PX4 A 335
036DC9SOFTWAREPX4 A:314 , PX4 A:344 , PX4 A:354BINDING SITE FOR RESIDUE PX4 A 336
037EC1SOFTWAREASN A:223 , LYS A:225 , PX4 A:307 , PX4 A:315 , PX4 A:330 , PX4 A:331 , PX4 A:355 , PX4 A:362BINDING SITE FOR RESIDUE PX4 A 337
038EC2SOFTWAREPX4 A:344 , PX4 A:351 , PX4 A:354 , PX4 A:374BINDING SITE FOR RESIDUE PX4 A 338
039EC3SOFTWAREPX4 A:312 , PX4 A:363BINDING SITE FOR RESIDUE PX4 A 339
040EC4SOFTWARETYR A:96 , PX4 A:305 , PX4 A:333 , PX4 A:343 , PX4 A:350 , PX4 A:364 , C3S A:432BINDING SITE FOR RESIDUE PX4 A 340
041EC5SOFTWAREPX4 A:364BINDING SITE FOR RESIDUE PX4 A 341
042EC6SOFTWAREPX4 A:306 , PX4 A:318 , PX4 A:321 , PX4 A:358BINDING SITE FOR RESIDUE PX4 A 342
043EC7SOFTWAREARG A:92 , VAL A:94 , GLY A:130 , PX4 A:316 , PX4 A:319 , PX4 A:340 , PX4 A:350BINDING SITE FOR RESIDUE PX4 A 343
044EC8SOFTWAREPX4 A:307 , PX4 A:322 , PX4 A:331 , PX4 A:336 , PX4 A:338 , PX4 A:351 , PX4 A:354BINDING SITE FOR RESIDUE PX4 A 344
045EC9SOFTWAREPX4 A:309 , PX4 A:358 , PX4 A:359 , PX4 A:383 , PX4 A:396BINDING SITE FOR RESIDUE PX4 A 345
046FC1SOFTWAREPX4 A:312 , C3S A:431BINDING SITE FOR RESIDUE PX4 A 346
047FC2SOFTWAREPX4 A:309 , PX4 A:351 , PX4 A:354BINDING SITE FOR RESIDUE PX4 A 347
048FC3SOFTWARETYR A:91 , SER A:110 , ASN A:114 , HIS A:123 , PHE A:124 , PX4 A:327 , PX4 A:332 , PX4 A:359 , PX4 A:407BINDING SITE FOR RESIDUE PX4 A 348
049FC4SOFTWAREPX4 A:361 , PX4 A:403BINDING SITE FOR RESIDUE PX4 A 349
050FC5SOFTWAREARG A:92 , HIS A:102 , ASP A:106 , LYS A:126 , VAL A:128 , PX4 A:315 , PX4 A:332 , PX4 A:340 , PX4 A:343 , PX4 A:370BINDING SITE FOR RESIDUE PX4 A 350
051FC6SOFTWAREPX4 A:309 , PX4 A:338 , PX4 A:344 , PX4 A:347 , PX4 A:393BINDING SITE FOR RESIDUE PX4 A 351
052FC7SOFTWAREPX4 A:316 , PX4 A:318 , PX4 A:319BINDING SITE FOR RESIDUE PX4 A 352
053FC8SOFTWAREPX4 A:323 , PX4 A:325 , PX4 A:361BINDING SITE FOR RESIDUE PX4 A 353
054FC9SOFTWAREPX4 A:314 , PX4 A:336 , PX4 A:338 , PX4 A:344 , PX4 A:347 , PX4 A:360BINDING SITE FOR RESIDUE PX4 A 354
055GC1SOFTWAREPX4 A:313 , PX4 A:325 , PX4 A:330 , PX4 A:337 , PX4 A:362BINDING SITE FOR RESIDUE PX4 A 355
056GC2SOFTWAREPX4 A:318BINDING SITE FOR RESIDUE PX4 A 357
057GC3SOFTWAREPX4 A:306 , PX4 A:318 , PX4 A:342 , PX4 A:345 , PX4 A:359 , PX4 A:383BINDING SITE FOR RESIDUE PX4 A 358
058GC4SOFTWARELYS A:87 , HIS A:123 , ARG A:125 , PX4 A:306 , PX4 A:327 , PX4 A:345 , PX4 A:348 , PX4 A:358 , PX4 A:369 , PX4 A:376 , PX4 A:407BINDING SITE FOR RESIDUE PX4 A 359
059GC5SOFTWAREPX4 A:335 , PX4 A:354BINDING SITE FOR RESIDUE PX4 A 360
060GC6SOFTWAREPX4 A:317 , PX4 A:326 , PX4 A:349 , PX4 A:353BINDING SITE FOR RESIDUE PX4 A 361
061GC7SOFTWAREPX4 A:313 , PX4 A:330 , PX4 A:331 , PX4 A:337 , PX4 A:355BINDING SITE FOR RESIDUE PX4 A 362
062GC8SOFTWAREPX4 A:305 , PX4 A:311 , PX4 A:312 , PX4 A:339BINDING SITE FOR RESIDUE PX4 A 363
063GC9SOFTWAREPX4 A:310 , PX4 A:333 , PX4 A:340 , PX4 A:341BINDING SITE FOR RESIDUE PX4 A 364
064HC1SOFTWAREPX4 A:369 , PX4 A:383 , PX4 A:390 , PX4 A:393 , PX4 A:396 , PX4 A:419BINDING SITE FOR RESIDUE PX4 A 365
065HC2SOFTWAREPX4 A:378 , PX4 A:386 , PX4 A:403BINDING SITE FOR RESIDUE PX4 A 366
066HC3SOFTWAREPX4 A:412BINDING SITE FOR RESIDUE PX4 A 367
067HC4SOFTWAREPX4 A:391 , PX4 A:406 , PX4 A:408 , PX4 A:414 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 368
068HC5SOFTWAREPX4 A:307 , PX4 A:359 , PX4 A:365 , PX4 A:370 , PX4 A:383 , PX4 A:430BINDING SITE FOR RESIDUE PX4 A 369
069HC6SOFTWAREPX4 A:350 , PX4 A:369 , PX4 A:381 , PX4 A:383 , PX4 A:394 , PX4 A:430BINDING SITE FOR RESIDUE PX4 A 370
070HC7SOFTWAREPX4 A:373 , PX4 A:395 , PX4 A:402 , PX4 A:426BINDING SITE FOR RESIDUE PX4 A 371
071HC8SOFTWAREPX4 A:398BINDING SITE FOR RESIDUE PX4 A 372
072HC9SOFTWAREPX4 A:371 , PX4 A:401 , PX4 A:406 , PX4 A:410 , PX4 A:414 , PX4 A:426BINDING SITE FOR RESIDUE PX4 A 373
073IC1SOFTWAREPX4 A:338 , PX4 A:381 , PX4 A:397 , PX4 A:423 , PX4 A:430BINDING SITE FOR RESIDUE PX4 A 374
074IC2SOFTWAREPX4 A:321 , PX4 A:392 , PX4 A:396 , PX4 A:400 , PX4 A:405 , PX4 A:407 , PX4 A:427BINDING SITE FOR RESIDUE PX4 A 375
075IC3SOFTWAREPX4 A:359 , PX4 A:390 , PX4 A:396 , PX4 A:407BINDING SITE FOR RESIDUE PX4 A 376
076IC4SOFTWAREPX4 A:311 , PX4 A:391 , PX4 A:408 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 377
077IC5SOFTWAREPX4 A:366 , PX4 A:388 , PX4 A:408 , PX4 A:414 , PX4 A:426BINDING SITE FOR RESIDUE PX4 A 378
078IC6SOFTWAREPX4 A:412 , PX4 A:413 , PX4 A:425 , PX4 A:428BINDING SITE FOR RESIDUE PX4 A 379
079IC7SOFTWAREPX4 A:413BINDING SITE FOR RESIDUE PX4 A 380
080IC8SOFTWAREPX4 A:370 , PX4 A:374 , PX4 A:402 , PX4 A:417 , PX4 A:418 , PX4 A:423BINDING SITE FOR RESIDUE PX4 A 381
081IC9SOFTWAREPX4 A:325 , PX4 A:397 , PX4 A:398 , PX4 A:404 , PX4 A:423 , C3S A:435BINDING SITE FOR RESIDUE PX4 A 382
082JC1SOFTWAREPX4 A:345 , PX4 A:358 , PX4 A:365 , PX4 A:369 , PX4 A:370 , PX4 A:394 , PX4 A:395 , PX4 A:400 , PX4 A:405 , PX4 A:407BINDING SITE FOR RESIDUE PX4 A 383
083JC2SOFTWAREPX4 A:392 , PX4 A:399 , PX4 A:400 , PX4 A:405 , PX4 A:427BINDING SITE FOR RESIDUE PX4 A 384
084JC3SOFTWAREPX4 A:398 , PX4 A:415 , C3S A:433BINDING SITE FOR RESIDUE PX4 A 385
085JC4SOFTWAREPX4 A:366 , PX4 A:402 , PX4 A:403 , PX4 A:417 , PX4 A:421BINDING SITE FOR RESIDUE PX4 A 386
086JC5SOFTWAREPX4 A:404 , PX4 A:415 , PX4 A:416 , PX4 A:421 , C3S A:433BINDING SITE FOR RESIDUE PX4 A 387
087JC6SOFTWAREPX4 A:312 , PX4 A:324 , PX4 A:378 , PX4 A:391 , PX4 A:414BINDING SITE FOR RESIDUE PX4 A 388
088JC7SOFTWAREPX4 A:333 , PX4 A:399 , PX4 A:401 , C3S A:434BINDING SITE FOR RESIDUE PX4 A 389
089JC8SOFTWAREPX4 A:365 , PX4 A:376 , PX4 A:393BINDING SITE FOR RESIDUE PX4 A 390
090JC9SOFTWAREPX4 A:368 , PX4 A:377 , PX4 A:388 , PX4 A:408 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 391
091KC1SOFTWAREPX4 A:375 , PX4 A:384 , PX4 A:427BINDING SITE FOR RESIDUE PX4 A 392
092KC2SOFTWAREPX4 A:351 , PX4 A:365 , PX4 A:390 , PX4 A:413 , PX4 A:419 , PX4 A:429BINDING SITE FOR RESIDUE PX4 A 393
093KC3SOFTWAREPX4 A:327 , PX4 A:370 , PX4 A:383 , PX4 A:402 , PX4 A:405 , PX4 A:430BINDING SITE FOR RESIDUE PX4 A 394
094KC4SOFTWAREPX4 A:371 , PX4 A:383 , PX4 A:401 , PX4 A:402BINDING SITE FOR RESIDUE PX4 A 395
095KC5SOFTWAREPX4 A:316 , PX4 A:345 , PX4 A:365 , PX4 A:375 , PX4 A:376 , PX4 A:407BINDING SITE FOR RESIDUE PX4 A 396
096KC6SOFTWAREPX4 A:374 , PX4 A:382 , PX4 A:398 , PX4 A:411 , PX4 A:423 , PX4 A:430BINDING SITE FOR RESIDUE PX4 A 397
097KC7SOFTWAREPX4 A:322 , PX4 A:372 , PX4 A:382 , PX4 A:385 , PX4 A:397 , C3S A:435BINDING SITE FOR RESIDUE PX4 A 398
098KC8SOFTWAREPX4 A:384 , PX4 A:389 , PX4 A:401 , PX4 A:410 , PX4 A:424BINDING SITE FOR RESIDUE PX4 A 399
099KC9SOFTWAREPX4 A:375 , PX4 A:383 , PX4 A:384 , PX4 A:401 , PX4 A:405BINDING SITE FOR RESIDUE PX4 A 400
100LC1SOFTWAREPX4 A:373 , PX4 A:389 , PX4 A:395 , PX4 A:399 , PX4 A:400 , PX4 A:405BINDING SITE FOR RESIDUE PX4 A 401
101LC2SOFTWAREPX4 A:371 , PX4 A:381 , PX4 A:386 , PX4 A:394 , PX4 A:395BINDING SITE FOR RESIDUE PX4 A 402
102LC3SOFTWAREPX4 A:349 , PX4 A:366 , PX4 A:386 , PX4 A:417 , PX4 A:421BINDING SITE FOR RESIDUE PX4 A 403
103LC4SOFTWAREPX4 A:382 , PX4 A:387 , PX4 A:415 , PX4 A:418 , PX4 A:423BINDING SITE FOR RESIDUE PX4 A 404
104LC5SOFTWAREPX4 A:375 , PX4 A:383 , PX4 A:384 , PX4 A:394 , PX4 A:400 , PX4 A:401 , PX4 A:407 , PX4 A:427BINDING SITE FOR RESIDUE PX4 A 405
105LC6SOFTWAREPX4 A:368 , PX4 A:373 , PX4 A:410 , PX4 A:414 , PX4 A:426 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 406
106LC7SOFTWAREPX4 A:348 , PX4 A:359 , PX4 A:375 , PX4 A:376 , PX4 A:383 , PX4 A:396 , PX4 A:405BINDING SITE FOR RESIDUE PX4 A 407
107LC8SOFTWAREPX4 A:368 , PX4 A:377 , PX4 A:378 , PX4 A:391 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 408
108LC9SOFTWAREPX4 A:373 , PX4 A:399 , PX4 A:406 , PX4 A:424BINDING SITE FOR RESIDUE PX4 A 410
109MC1SOFTWAREPX4 A:397 , PX4 A:412BINDING SITE FOR RESIDUE PX4 A 411
110MC2SOFTWAREPX4 A:367 , PX4 A:379 , PX4 A:411 , PX4 A:428BINDING SITE FOR RESIDUE PX4 A 412
111MC3SOFTWAREPX4 A:379 , PX4 A:380 , PX4 A:393 , PX4 A:419 , PX4 A:425 , PX4 A:428 , PX4 A:429BINDING SITE FOR RESIDUE PX4 A 413
112MC4SOFTWAREPX4 A:310 , PX4 A:324 , PX4 A:368 , PX4 A:373 , PX4 A:378 , PX4 A:388 , PX4 A:406 , PX4 A:424 , PX4 A:426 , C3S A:436BINDING SITE FOR RESIDUE PX4 A 414
113MC5SOFTWAREPX4 A:313 , PX4 A:385 , PX4 A:387 , PX4 A:404 , PX4 A:421 , C3S A:433BINDING SITE FOR RESIDUE PX4 A 415
114MC6SOFTWAREPX4 A:387 , PX4 A:421BINDING SITE FOR RESIDUE PX4 A 416
115MC7SOFTWAREPX4 A:334 , PX4 A:381 , PX4 A:386 , PX4 A:403 , PX4 A:418 , PX4 A:421BINDING SITE FOR RESIDUE PX4 A 417
116MC8SOFTWAREPX4 A:320 , PX4 A:381 , PX4 A:404 , PX4 A:417 , PX4 A:421 , PX4 A:423BINDING SITE FOR RESIDUE PX4 A 418
117MC9SOFTWAREPX4 A:365 , PX4 A:393 , PX4 A:413 , PX4 A:429BINDING SITE FOR RESIDUE PX4 A 419
118NC1SOFTWAREPX4 A:386 , PX4 A:387 , PX4 A:403 , PX4 A:415 , PX4 A:416 , PX4 A:417 , PX4 A:418BINDING SITE FOR RESIDUE PX4 A 421
119NC2SOFTWAREPX4 A:307 , PX4 A:374 , PX4 A:381 , PX4 A:382 , PX4 A:397 , PX4 A:404 , PX4 A:418BINDING SITE FOR RESIDUE PX4 A 423
120NC3SOFTWAREPX4 A:399 , PX4 A:410 , PX4 A:414BINDING SITE FOR RESIDUE PX4 A 424
121NC4SOFTWAREPX4 A:379 , PX4 A:413BINDING SITE FOR RESIDUE PX4 A 425
122NC5SOFTWAREPX4 A:371 , PX4 A:373 , PX4 A:378 , PX4 A:406 , PX4 A:414 , C3S A:432BINDING SITE FOR RESIDUE PX4 A 426
123NC6SOFTWAREPX4 A:375 , PX4 A:384 , PX4 A:392 , PX4 A:405BINDING SITE FOR RESIDUE PX4 A 427
124NC7SOFTWAREPX4 A:379 , PX4 A:412 , PX4 A:413 , PX4 A:429BINDING SITE FOR RESIDUE PX4 A 428
125NC8SOFTWAREPX4 A:393 , PX4 A:413 , PX4 A:419 , PX4 A:428BINDING SITE FOR RESIDUE PX4 A 429
126NC9SOFTWAREPX4 A:369 , PX4 A:370 , PX4 A:374 , PX4 A:394 , PX4 A:397BINDING SITE FOR RESIDUE PX4 A 430
127OC1SOFTWAREPX4 A:305 , PX4 A:324 , PX4 A:334 , PX4 A:346BINDING SITE FOR RESIDUE C3S A 431
128OC2SOFTWARETYR A:96 , PRO A:101 , HIS A:102 , PX4 A:305 , PX4 A:333 , PX4 A:334 , PX4 A:340 , PX4 A:426BINDING SITE FOR RESIDUE C3S A 432
129OC3SOFTWAREPX4 A:385 , PX4 A:387 , PX4 A:415BINDING SITE FOR RESIDUE C3S A 433
130OC4SOFTWAREPX4 A:389BINDING SITE FOR RESIDUE C3S A 434
131OC5SOFTWAREPX4 A:382 , PX4 A:398BINDING SITE FOR RESIDUE C3S A 435
132OC6SOFTWAREPX4 A:334 , PX4 A:368 , PX4 A:377 , PX4 A:391 , PX4 A:406 , PX4 A:408 , PX4 A:414BINDING SITE FOR RESIDUE C3S A 436

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MZI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MZI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (3, 3)

NMR Structure (3, 3)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_006729R77HMMP7_HUMANPolymorphism10502001AR57H
2UniProtVAR_021027G137DMMP7_HUMANPolymorphism17884789AG117D
3UniProtVAR_021028P241LMMP7_HUMANPolymorphism17886506AP221L
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
NMR Structure * (3, 3)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_006729R77HMMP7_HUMANPolymorphism10502001AR57H
2UniProtVAR_021027G137DMMP7_HUMANPolymorphism17884789AG117D
3UniProtVAR_021028P241LMMP7_HUMANPolymorphism17886506AP221L
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MZI)

(-) Exons   (6, 6)

NMR Structure (6, 6)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002602271aENSE00002145134chr11:102401484-102401324161MMP7_HUMAN1-36361A:0-1617
1.2ENST000002602272ENSE00000930299chr11:102398714-102398488227MMP7_HUMAN37-112761A:17-9276
1.3aENST000002602273aENSE00000930298chr11:102398403-102398255149MMP7_HUMAN112-162511A:92-14251
1.4aENST000002602274aENSE00000930297chr11:102395795-102395667129MMP7_HUMAN162-205441A:142-18544
1.5ENST000002602275ENSE00000930296chr11:102394132-102393971162MMP7_HUMAN205-259551A:185-23955
1.6ENST000002602276ENSE00001252223chr11:102391535-102391239297MMP7_HUMAN259-26791A:239-2479

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:248
 aligned with MMP7_HUMAN | P09237 from UniProtKB/Swiss-Prot  Length:267

    Alignment length:248
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259        
           MMP7_HUMAN    20 LPQEAGGMSELQWEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK 267
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh..........hhhhhh.........................eeeeee.......hhhhhhhhhhhhhhhhhh....eeee.......eeeeee.................eee..........eeee....ee......eehhhhhhhhhhhh...........................hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------H-----------------------------------------------------------D-------------------------------------------------------------------------------------------------------L-------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a        Exon 1.2  PDB: A:17-92 UniProt: 37-112                                      -------------------------------------------------Exon 1.4a  PDB: A:142-185 UniProt: 162-205  -----------------------------------------------------Exon 1.6  Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------Exon 1.3a  PDB: A:92-142 UniProt: 112-162          ------------------------------------------Exon 1.5  PDB: A:185-239 UniProt: 205-259              -------- Transcript 1 (2)
                 2mzi A   0 LPQEAGGMSELQWEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHALGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK 247
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MZI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MZI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MZI)

(-) Gene Ontology  (22, 22)

NMR Structure(hide GO term definitions)
Chain A   (MMP7_HUMAN | P09237)
molecular function
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004222    metalloendopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008237    metallopeptidase activity    Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0071260    cellular response to mechanical stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
    GO:0030574    collagen catabolic process    The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells.
    GO:0044849    estrous cycle    A type of ovulation cycle, which occurs in most mammalian therian females, where the endometrium is resorbed if pregnancy does not occur.
    GO:0022617    extracellular matrix disassembly    A process that results in the breakdown of the extracellular matrix.
    GO:0060135    maternal process involved in female pregnancy    A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0031667    response to nutrient levels    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.
cellular component
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0031012    extracellular matrix    A structure lying external to one or more cells, which provides structural support for cells or tissues.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005578    proteinaceous extracellular matrix    A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus.

 Visualization

(-) Interactive Views

NMR Structure
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    C3S  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PX4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
    FC4  [ RasMol ]  +environment [ RasMol ]
    FC5  [ RasMol ]  +environment [ RasMol ]
    FC6  [ RasMol ]  +environment [ RasMol ]
    FC7  [ RasMol ]  +environment [ RasMol ]
    FC8  [ RasMol ]  +environment [ RasMol ]
    FC9  [ RasMol ]  +environment [ RasMol ]
    GC1  [ RasMol ]  +environment [ RasMol ]
    GC2  [ RasMol ]  +environment [ RasMol ]
    GC3  [ RasMol ]  +environment [ RasMol ]
    GC4  [ RasMol ]  +environment [ RasMol ]
    GC5  [ RasMol ]  +environment [ RasMol ]
    GC6  [ RasMol ]  +environment [ RasMol ]
    GC7  [ RasMol ]  +environment [ RasMol ]
    GC8  [ RasMol ]  +environment [ RasMol ]
    GC9  [ RasMol ]  +environment [ RasMol ]
    HC1  [ RasMol ]  +environment [ RasMol ]
    HC2  [ RasMol ]  +environment [ RasMol ]
    HC3  [ RasMol ]  +environment [ RasMol ]
    HC4  [ RasMol ]  +environment [ RasMol ]
    HC5  [ RasMol ]  +environment [ RasMol ]
    HC6  [ RasMol ]  +environment [ RasMol ]
    HC7  [ RasMol ]  +environment [ RasMol ]
    HC8  [ RasMol ]  +environment [ RasMol ]
    HC9  [ RasMol ]  +environment [ RasMol ]
    IC1  [ RasMol ]  +environment [ RasMol ]
    IC2  [ RasMol ]  +environment [ RasMol ]
    IC3  [ RasMol ]  +environment [ RasMol ]
    IC4  [ RasMol ]  +environment [ RasMol ]
    IC5  [ RasMol ]  +environment [ RasMol ]
    IC6  [ RasMol ]  +environment [ RasMol ]
    IC7  [ RasMol ]  +environment [ RasMol ]
    IC8  [ RasMol ]  +environment [ RasMol ]
    IC9  [ RasMol ]  +environment [ RasMol ]
    JC1  [ RasMol ]  +environment [ RasMol ]
    JC2  [ RasMol ]  +environment [ RasMol ]
    JC3  [ RasMol ]  +environment [ RasMol ]
    JC4  [ RasMol ]  +environment [ RasMol ]
    JC5  [ RasMol ]  +environment [ RasMol ]
    JC6  [ RasMol ]  +environment [ RasMol ]
    JC7  [ RasMol ]  +environment [ RasMol ]
    JC8  [ RasMol ]  +environment [ RasMol ]
    JC9  [ RasMol ]  +environment [ RasMol ]
    KC1  [ RasMol ]  +environment [ RasMol ]
    KC2  [ RasMol ]  +environment [ RasMol ]
    KC3  [ RasMol ]  +environment [ RasMol ]
    KC4  [ RasMol ]  +environment [ RasMol ]
    KC5  [ RasMol ]  +environment [ RasMol ]
    KC6  [ RasMol ]  +environment [ RasMol ]
    KC7  [ RasMol ]  +environment [ RasMol ]
    KC8  [ RasMol ]  +environment [ RasMol ]
    KC9  [ RasMol ]  +environment [ RasMol ]
    LC1  [ RasMol ]  +environment [ RasMol ]
    LC2  [ RasMol ]  +environment [ RasMol ]
    LC3  [ RasMol ]  +environment [ RasMol ]
    LC4  [ RasMol ]  +environment [ RasMol ]
    LC5  [ RasMol ]  +environment [ RasMol ]
    LC6  [ RasMol ]  +environment [ RasMol ]
    LC7  [ RasMol ]  +environment [ RasMol ]
    LC8  [ RasMol ]  +environment [ RasMol ]
    LC9  [ RasMol ]  +environment [ RasMol ]
    MC1  [ RasMol ]  +environment [ RasMol ]
    MC2  [ RasMol ]  +environment [ RasMol ]
    MC3  [ RasMol ]  +environment [ RasMol ]
    MC4  [ RasMol ]  +environment [ RasMol ]
    MC5  [ RasMol ]  +environment [ RasMol ]
    MC6  [ RasMol ]  +environment [ RasMol ]
    MC7  [ RasMol ]  +environment [ RasMol ]
    MC8  [ RasMol ]  +environment [ RasMol ]
    MC9  [ RasMol ]  +environment [ RasMol ]
    NC1  [ RasMol ]  +environment [ RasMol ]
    NC2  [ RasMol ]  +environment [ RasMol ]
    NC3  [ RasMol ]  +environment [ RasMol ]
    NC4  [ RasMol ]  +environment [ RasMol ]
    NC5  [ RasMol ]  +environment [ RasMol ]
    NC6  [ RasMol ]  +environment [ RasMol ]
    NC7  [ RasMol ]  +environment [ RasMol ]
    NC8  [ RasMol ]  +environment [ RasMol ]
    NC9  [ RasMol ]  +environment [ RasMol ]
    OC1  [ RasMol ]  +environment [ RasMol ]
    OC2  [ RasMol ]  +environment [ RasMol ]
    OC3  [ RasMol ]  +environment [ RasMol ]
    OC4  [ RasMol ]  +environment [ RasMol ]
    OC5  [ RasMol ]  +environment [ RasMol ]
    OC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2mzi)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ NMR Structure - model 1 PNG format | NMR Structure - model 1, sites PNG format | NMR Structure - all models PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2mzi
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  MMP7_HUMAN | P09237
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.4.24.23
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  MMP7_HUMAN | P09237
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MMP7_HUMAN | P09237: 1mmp 1mmq 1mmr 2ddy 2mze 2mzh 2y6c 2y6d

(-) Related Entries Specified in the PDB File

2mze SOLUTION STRUCTURE OF UNCOMPLEXED FORM. RELATED ID: 25485 RELATED DB: BMRB SOLUTION STRUCTURE OF UNCOMPLEXED FORM.
2mzh SOLUTION STRUCTURE OF COMPLEXED FORM TO ZWITTERIONIC MEMBRANE RELATED ID: 25488 RELATED DB: BMRB SOLUTION STRUCTURE OF COMPLEXED FORM TO ZWITTERIONIC MEMBRANE RELATED ID: 25489 RELATED DB: BMRB