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(-) Description

Title :  NMR STRUCTURE OF P75 TRANSMEMBRANE DOMAIN IN DPC MICELLES
 
Authors :  K. Nadezhdin, A. Arseniev, S. Goncharuk, K. Mineev
Date :  12 Dec 13  (Deposition) - 24 Dec 14  (Release) - 24 Dec 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (10x)
NMR Structure *:  A,B  (1x)
Keywords :  Dimer, Transmembrane, P75, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Nadezhdin, A. Arseniev, S. Goncharuk, K. Mineev, M. Vilar
Structure Of Dimeric P75 Neurotrophin Receptor Transmembran Domain Provides Insight On Neurotrophin Signaling
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 16
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEMEX-1
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 245-284
    Gene: NGFR, TNFRSF16
    Mutation: YES
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: GP80-LNGFR, LOW AFFINITY NEUROTROPHIN RECEPTOR P75NTR, LOW- AFFINITY NERVE GROWTH FACTOR RECEPTOR, NGF RECEPTOR, P75 ICD

 Structural Features

(-) Chains, Units

  12
NMR Structure (10x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MIC)

(-) Sites  (0, 0)

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(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:14 -B:114

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:41
                                                                         
               SCOP domains ----------------------------------------- SCOP domains
               CATH domains ----------------------------------------- CATH domains
               Pfam domains ----------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------- PROSITE
                 Transcript ----------------------------------------- Transcript
                 2mic A   1 MTRGTTDNLIPVYCSILAAVVVGLVAYIAFKRWNSSKQNKQ  41
                                    10        20        30        40 


Chain B from PDB  Type:PROTEIN  Length:41
                                                                         
               SCOP domains ----------------------------------------- SCOP domains
               CATH domains ----------------------------------------- CATH domains
               Pfam domains ----------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------- PROSITE
                 Transcript ----------------------------------------- Transcript
                 2mic B 101 MTRGTTDNLIPVYCSILAAVVVGLVAYIAFKRWNSSKQNKQ 141
                                   110       120       130       140
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MIC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MIC)

(-) Gene Ontology  (67, 67)

NMR Structure(hide GO term definitions)

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 Related Entries

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        TNR16_RAT | P07174: 1ngr 1sg1 2mjo 3buk 3ij2 4f42 4f44

(-) Related Entries Specified in the PDB File

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