Chain A from PDB Type:PROTEIN Length:129
aligned with AVID_CHICK | P02701 from UniProtKB/Swiss-Prot Length:152
Alignment length:131
31 41 51 61 71 81 91 101 111 121 131 141 151
AVID_CHICK 22 GLSARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE 152
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.--......eeeeeee......eeeeeeeeee.....eeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----AVIDIN_2 PDB: A:2-125 UniProt: 26-149 --- PROSITE (2)
PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) --------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (4)
Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 A -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQH--KRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 | 57 67 77 87 97 107 117 127
-1| 54 57
1
Chain A from PDB Type:PROTEIN Length:129
aligned with AVR4_CHICK | P56734 from UniProtKB/Swiss-Prot Length:150
Alignment length:129
31 41 51 61 71 81 91 101 111 121 131 141
AVR4_CHICK 22 SLSARKCSLTGKWTNNLGSIMTIRAVNSRGEFTGTYLTAVADNPGNITLSPLLGIQHKRASQPTFGFTVHWNFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDISYDWKATRVGYNNFTRLCTVEE 150
SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.......eeeeeee......eeeeeeeeee.....eeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T-------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----AVIDIN_2 PDB: A:2-125 UniProt: 26-147 --- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 A -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQHKRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 ||59 69 79 89 99 109 119
-1| 54|
1 57
Chain B from PDB Type:PROTEIN Length:129
aligned with AVID_CHICK | P02701 from UniProtKB/Swiss-Prot Length:152
Alignment length:131
31 41 51 61 71 81 91 101 111 121 131 141 151
AVID_CHICK 22 GLSARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE 152
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.--......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----AVIDIN_2 PDB: B:2-125 UniProt: 26-149 --- PROSITE (2)
PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) --------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (4)
Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 B -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQH--KRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 | 57 67 77 87 97 107 117 127
-1| 54 57
1
Chain B from PDB Type:PROTEIN Length:129
aligned with AVR4_CHICK | P56734 from UniProtKB/Swiss-Prot Length:150
Alignment length:129
31 41 51 61 71 81 91 101 111 121 131 141
AVR4_CHICK 22 SLSARKCSLTGKWTNNLGSIMTIRAVNSRGEFTGTYLTAVADNPGNITLSPLLGIQHKRASQPTFGFTVHWNFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDISYDWKATRVGYNNFTRLCTVEE 150
SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T-------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----AVIDIN_2 PDB: B:2-125 UniProt: 26-147 --- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 B -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQHKRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 ||59 69 79 89 99 109 119
-1| 54|
1 57
Chain C from PDB Type:PROTEIN Length:129
aligned with AVID_CHICK | P02701 from UniProtKB/Swiss-Prot Length:152
Alignment length:131
31 41 51 61 71 81 91 101 111 121 131 141 151
AVID_CHICK 22 GLSARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE 152
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.--......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----AVIDIN_2 PDB: C:2-125 UniProt: 26-149 --- PROSITE (2)
PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) --------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (4)
Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 C -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQH--KRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 | 57 67 77 87 97 107 117 127
-1| 54 57
1
Chain C from PDB Type:PROTEIN Length:129
aligned with AVR4_CHICK | P56734 from UniProtKB/Swiss-Prot Length:150
Alignment length:129
31 41 51 61 71 81 91 101 111 121 131 141
AVR4_CHICK 22 SLSARKCSLTGKWTNNLGSIMTIRAVNSRGEFTGTYLTAVADNPGNITLSPLLGIQHKRASQPTFGFTVHWNFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDISYDWKATRVGYNNFTRLCTVEE 150
SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T-------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----AVIDIN_2 PDB: C:2-125 UniProt: 26-147 --- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 C -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQHKRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 ||59 69 79 89 99 109 119
-1| 54|
1 57
Chain D from PDB Type:PROTEIN Length:129
aligned with AVID_CHICK | P02701 from UniProtKB/Swiss-Prot Length:152
Alignment length:131
31 41 51 61 71 81 91 101 111 121 131 141 151
AVID_CHICK 22 GLSARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE 152
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.--......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----AVIDIN_2 PDB: D:2-125 UniProt: 26-149 --- PROSITE (2)
PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) --------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (4)
Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 D -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQH--KRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 | 57 67 77 87 97 107 117 127
-1| 54 57
1
Chain D from PDB Type:PROTEIN Length:129
aligned with AVR4_CHICK | P56734 from UniProtKB/Swiss-Prot Length:150
Alignment length:129
31 41 51 61 71 81 91 101 111 121 131 141
AVR4_CHICK 22 SLSARKCSLTGKWTNNLGSIMTIRAVNSRGEFTGTYLTAVADNPGNITLSPLLGIQHKRASQPTFGFTVHWNFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDISYDWKATRVGYNNFTRLCTVEE 150
SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee....eeee.......eeeeeee............eeeeeee.......eeeeeee......eeeeeeeeeee...eeeeeeeeeee....hhhhhhhheeeeeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------T-------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----AVIDIN_2 PDB: D:2-125 UniProt: 26-147 --- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------AVIDIN_1 ------ PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
2mf6 D -3 QTVARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVADNPGNITLSPLLGIQHKRASQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGYNIFTRLRTQKE 128
|| 7 17 27 37 47 ||59 69 79 89 99 109 119
-1| 54|
1 57
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |