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(-) Description

Title :  STRUCTURE OF BACTERIOPHAGE SPP1 GP17 PROTEIN
 
Authors :  B. Chagot, I. Auzat, M. Gallopin, I. Petitpas, B. Gilquin, P. Tavares, S Justin
Date :  07 Jul 11  (Deposition) - 28 Sep 11  (Release) - 28 Dec 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Chagot, I. Auzat, M. Gallopin, I. Petitpas, B. Gilquin, P. Tavares, S. Zinn-Justin
Solution Structure Of Gp17 From The Siphoviridae Bacteriophage Spp1: Insights Into Its Role In Virion Assembly.
Proteins V. 80 319 2012
PubMed-ID: 22072538  |  Reference-DOI: 10.1002/PROT.23191

(-) Compounds

Molecule 1 - BACTERIOPHAGE SPP1 COMPLETE NUCLEOTIDE SEQUENCE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: BACILLUS PHAGE SPP1
    Organism Taxid: 10724

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LFP)

(-) Sites  (0, 0)

(no "Site" information available for 2LFP)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2LFP)

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Tyr A:41 -Pro A:42

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2LFP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2LFP)

(-) Exons   (0, 0)

(no "Exon" information available for 2LFP)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:139
 aligned with COMPL_BPSPP | O48448 from UniProtKB/Swiss-Prot  Length:134

    Alignment length:139
                               1                                                                                                                                  134  
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127      |  
          COMPL_BPSPP     - ---MTWKLASRALQKATVENLESYQPLMEMVNQVTESPGKDDPYPYVVIGDQSSTPFETKSSFGENITMDFHVWGGTTRAEAQDISSRVLEALTYKPLMFEGFTFVAKKLVLAQVITDTDGVTKHGIIKVRFTINNN--   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhh.........ee..........eeeee................eeeeeeee...hhhhhhhhhhhhhhhhh....ee..ee.ee.................eeeeeeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2lfp A  -4 QGLQTWKLASRALQKATVENLESYQPLMEMVNQVTESPGKDDPYPYVVIGDQSSTPFETKSSFGENITMDFHVWGGTTRAEAQDISSRVLEALTYKPLMFEGFTFVAKKLVLAQVITDTDGVTKHGIIKVRFTINNNTG 201
                               ||    7        17        27        37        47        57        67        77        87        97       107       117       127      || 
                              -1|                                                                                                                                 134| 
                                2                                                                                                                                  200
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LFP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LFP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LFP)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2LFP)

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  Cis Peptide Bonds
    Tyr A:41 - Pro A:42   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        COMPL_BPSPP | O48448: 5a20 5a21

(-) Related Entries Specified in the PDB File

1z1z
2gjv
2l25 RELATED ID: 17768 RELATED DB: BMRB
3fz2
3fzb