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(-) Description

Title :  SOLUTION NMR STRUCTURE OF A CONSERVED HYPOTHETICAL MEMBRANE LIPOPROTEIN OBTAINED FROM UREAPLASMA PARVUM: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET UUR17A (139-239)
 
Authors :  R. Mani, G. Swapna, H. Janjua, C. Ciccosanti, Y. Huang, D. Patel, R. Xiao, T. Acton, J. Everett, G. T. Montelione, Northeast Structural Genomics Consortium (Nesg)
Date :  22 Dec 09  (Deposition) - 05 Jan 10  (Release) - 05 Jan 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Lipoprotein, Nesg, Uur17A, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Mani, G. Swapna, H. Janjua, C. Ciccosanti, Y. Huang, D. Patel, R. Xiao, T. Acton, J. Everett, G. T. Montelione
Nmr Solution Structure Of A Conserved Hypothetical Membrane Lipoprotein Obtained From Ureaplasma Parvum : Northeast Structural Genomics Consortium Target Uur17A (139-239)
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL MEMBRANE LIPOPROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET 21-23C
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 128-239
    Gene: UU045
    Organism Common: UREAPLASMA UREALYTICUM BIOTYPE 1
    Organism Scientific: UREAPLASMA PARVUM
    Organism Taxid: 134821

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:121
 aligned with MALP_UREPA | Q9PRA0 from UniProtKB/Swiss-Prot  Length:834

    Alignment length:164
                                   136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286    
           MALP_UREPA   127 DLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNYDQLLPSQIYKNYYQGIEIQQHKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYGVDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDK 290
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh......eeeee...........hhhhhhh.....eeeee......ee..eeeee....hhhhhhhhheeeeeeeeee.....eeeeeeeee.......-------------------------------------------........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2krt A   1 MLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNYDQLLPSQIYKNYYQGIEIQQHKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPY-------------------------------------------LEHHHHHH 121
                                    10        20        30        40        50        60        70        80        90       100       110  |      -         -         -         -      |117    
                                                                                                                                          113                                         114
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (MALP_UREPA | Q9PRA0)
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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        MALP_UREPA | Q9PRA0: 3jvc 3k63

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