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(-) Description

Title :  NMR STRUCTURE OF THE PROTEIN TM1367
 
Authors :  B. Mohanty, B. Pedrini, P. Serrano, M. Geralt, R. Horst, T. Herrmann, I. K. Wuthrich, Joint Center For Structural Genomics (Jcsg)
Date :  27 Oct 08  (Deposition) - 13 Jan 09  (Release) - 12 Jan 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Tm1367, Termotoga Maritima, Structural Genomics, Psi-2, Protein Structure Initiative, Joint Center For Structural Genomics, Jcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mohanty, P. Serrano, B. Pedrini, K. Jaudzems, M. Geralt, R. Horst, T. Herrmann, M. A. Elsliger, I. A. Wilson, K. Wuthrich
Comparison Of Nmr And Crystal Structures For The Proteins Tm1112 And Tm1367.
Acta Crystallogr. , Sect. F V. 66 1381 2010
PubMed-ID: 20944235  |  Reference-DOI: 10.1107/S1744309110020956

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN TM1367
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET25B
    Expression System Strain: ROSSETA DE3
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TM_1367
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KA0)

(-) Sites  (0, 0)

(no "Site" information available for 2KA0)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KA0)

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Ile A:30 -Pro A:31

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2KA0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2KA0)

(-) Exons   (0, 0)

(no "Exon" information available for 2KA0)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:124
 aligned with Q9X187_THEMA | Q9X187 from UniProtKB/TrEMBL  Length:124

    Alignment length:124
                                    10        20        30        40        50        60        70        80        90       100       110       120    
         Q9X187_THEMA     1 MRVELLFESGKCVIDLNEEYEVVKLLKEKIPFESVVNTWGEEIYFSTPVNVQKMENPREVVEIGDVGYWPPGKALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIKDGEKVAVRFASS 124
               SCOP domains d2ka0a_ A: automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains Cyclophil_like-2ka0A01 A:1-120                                                                                          ---- Pfam domains
         Sec.struct. author .eeeee....eeeeee...hhhhhhhh....eee..eee..eee....................ee.eehhhhee.ee....................eeeee..hhhhhh.....eeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ka0 A   1 MRVELLFESGKCVIDLNEEYEVVKLLKEKIPFESVVNTWGEEIYFSTPVNVQKMENPREVVEIGDVGYWPPGKALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIKDGEKVAVRFASS 124
                                    10        20        30        40        50        60        70        80        90       100       110       120
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KA0)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Cyclophil-like (65)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2KA0)

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  Cis Peptide Bonds
    Ile A:30 - Pro A:31   [ RasMol ]  
 

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  2ka0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9X187_THEMA | Q9X187: 1zx8

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