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(-) Description

Title :  STRUCTURE OF MOCO CARRIER PROTEIN FROM CHLAMYDOMONAS REINHARDTII
 
Authors :  K. Fischer, A. Llamas, M. Tejada-Jimenez, N. Schrader, J. Kuper, R. R. M E. Fernandez, G. Schwarz
Date :  25 Jul 06  (Deposition) - 27 Jul 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.32
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Molybdenum Cofactor, Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Fischer, A. Llamas, M. Tejada-Jimenez, N. Schrader, J. Kuper, F. S. Ataya, A. Galvan, R. R. Mendel, E. Fernandez, G. Schwarz
Function And Structure Of The Molybdenum Cofactor Carrier Protein From Chlamydomonas Reinhardtii.
J. Biol. Chem. V. 281 30186 2006
PubMed-ID: 16873364  |  Reference-DOI: 10.1074/JBC.M603919200

(-) Compounds

Molecule 1 - MOCO CARRIER PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE80-CRMCP1
    Expression System Strain: TP1000
    Expression System Taxid: 562
    Expression System Vector: PQE80
    Expression System Vector Type: PLASMID
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2IZ7)

(-) Sites  (0, 0)

(no "Site" information available for 2IZ7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2IZ7)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Arg A:92 -Asp A:93
2Pro B:71 -Asp B:72

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2IZ7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2IZ7)

(-) Exons   (0, 0)

(no "Exon" information available for 2IZ7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:162
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:164
                                                                                                                                                                                           165  
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163 |  
         Q8RV61_CHLRE     4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA--   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhh...eeeee.....--......eeee................eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2iz7 A   4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDT--ISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAKL 167
                                    13        23        33        43        53        63        73  |     83        93       103       113       123       133       143       153       163    
                                                                                                73 76                                                                                           


Chain B from PDB  Type:PROTEIN  Length:161
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:163
                                                                                                                                                                                           165 
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163 | 
         Q8RV61_CHLRE     4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhh...eeeee.....--......eeee..........hhhhh.eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2iz7 B   4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDT--ISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 166
                                    13        23        33        43        53        63        73  |     83        93       103       113       123       133       143       153       163   
                                                                                                73 76
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2IZ7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2IZ7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2IZ7)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (Q8RV61_CHLRE | Q8RV61)
molecular function
    GO:0016799    hydrolase activity, hydrolyzing N-glycosyl compounds    Catalysis of the hydrolysis of any N-glycosyl bond.
biological process
    GO:0009691    cytokinin biosynthetic process    The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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  Cis Peptide Bonds
    Arg A:92 - Asp A:93   [ RasMol ]  
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8RV61_CHLRE | Q8RV61: 2iz5 2iz6

(-) Related Entries Specified in the PDB File

2iz5 FUNCTION AND STRUCTURE OF THE MOLYBDENUM COFACTOR CARRIER PROTEIN MCP FROM CHLAMYDOMONAS REINHARDTII
2iz6 STRUCTURE OF THE CHLAMYDOMONAS REINHARDTII MOCO CARRIER PROTEIN