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(-) Description

Title :  FUNCTION AND STRUCTURE OF THE MOLYBDENUM COFACTOR CARRIER PROTEIN MCP FROM CHLAMYDOMONAS REINHARDTII
 
Authors :  K. Fischer, A. Llamas, M. Tejada-Jimenez, N. Schrader, J. Kuper, R. R. M E. Fernandez, G. Schwarz
Date :  25 Jul 06  (Deposition) - 26 Jul 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.29
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Fischer, A. Llamas, M. Tejada-Jimenez, N. Schrader, J. Kuper, F. S. Ataya, A. Galvan, R. R. Mendel, E. Fernandez, G. Schwarz
Function And Structure Of The Molybdenum Cofactor Carrier Protein From Chlamydomonas Reinhardtii.
J. Biol. Chem. V. 281 30186 2006
PubMed-ID: 16873364  |  Reference-DOI: 10.1074/JBC.M603919200

(-) Compounds

Molecule 1 - MOCO CARRIER PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Expression System Variant: DL41
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2IZ5)

(-) Sites  (0, 0)

(no "Site" information available for 2IZ5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2IZ5)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:70 -Pro A:71

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2IZ5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2IZ5)

(-) Exons   (0, 0)

(no "Exon" information available for 2IZ5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:160
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:163
                                                                                                                                                                                           165 
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163 | 
         Q8RV61_CHLRE     4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......hhhhhhhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhhh...eeeee.....--......eeee....-...hhhhhhh.eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2iz5 A   4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDT--ISDAVDIPIVTGLG-ARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 166
                                    13        23        33        43        53        63        73  |     83     | |93       103       113       123       133       143       153       163   
                                                                                                73 76           89 |                                                                           
                                                                                                                  91                                                                           


Chain B from PDB  Type:PROTEIN  Length:161
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:163
                                                                                                                                                                                           165 
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163 | 
         Q8RV61_CHLRE     4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......hhhhhhhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhhh...eeeee...--........eeee........hhhhhhh.eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2iz5 B   4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP--SEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 166
                                    13        23        33        43        53        63       | -|       83        93       103       113       123       133       143       153       163   
                                                                                              71 74                                                                                            


Chain C from PDB  Type:PROTEIN  Length:158
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:163
                                                                                                                                                                                           165 
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163 | 
         Q8RV61_CHLRE     4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhh...eeeee.-----.......eeee........hhhhhhh.eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2iz5 C   4 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLP-----EISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 166
                                    13        23        33        43        53        63     |   - |      83        93       103       113       123       133       143       153       163   
                                                                                            69    75                                                                                           


Chain D from PDB  Type:PROTEIN  Length:160
 aligned with Q8RV61_CHLRE | Q8RV61 from UniProtKB/TrEMBL  Length:165

    Alignment length:162
                                                                                                                                                                                          165 
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164| 
         Q8RV61_CHLRE     5 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee.......hhhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhh...eeeee.--..........eeee........hhhhhhh.eeeee..hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2iz5 D   5 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLP--DTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 166
                                    14        24        34        44        54        64    |  |74        84        94       104       114       124       134       144       154       164  
                                                                                           69 72
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2IZ5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2IZ5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2IZ5)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (Q8RV61_CHLRE | Q8RV61)
molecular function
    GO:0016799    hydrolase activity, hydrolyzing N-glycosyl compounds    Catalysis of the hydrolysis of any N-glycosyl bond.
biological process
    GO:0009691    cytokinin biosynthetic process    The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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  Sites
(no "Sites" information available for 2iz5)
 
  Cis Peptide Bonds
    Gly A:70 - Pro A:71   [ RasMol ]  
 

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  2iz5
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8RV61_CHLRE | Q8RV61: 2iz6 2iz7

(-) Related Entries Specified in the PDB File

2iz6 STRUCTURE OF THE CHLAMYDOMONAS RHEINHARDTII MOCO CARRIER PROTEIN
2iz7 STRUCTURE OF MOCO CARRIER PROTEIN FROM CHLAMYDOMONAS RHEINHARDTII