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Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   GAPN T244S MUTANT X-RAY STRUCTURE AT 2.5 A

Authors :   A. Pailot, K. D'Ambrosio, C. Corbier, F. Talfournier, G. Branlant

Date :   14 Sep 06 (Deposition) - 18 Sep 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Aldh, T244, Acylation Step, Hydride Transfer, Conformation Of Nicotinamide, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Pailot, K. D'Ambrosio, C. Corbier, F. Talfournier, G. Branlant
Invariant Thr(244) Is Essential For The Efficient Acylation Step Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase From Streptococcus Mutans.
Biochem. J. V. 400 521 2006
PubMed-ID: 16958622 | Reference-DOI: 10.1042/BJ20060843

Molecule 1 - NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
	Chains	:	A, B, C, D
	EC Number	:	1.2.1.9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PBLUESCRIPT SK
	Expression System Strain	:	DH5A(ALFA)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	GAPN
	Mutation	:	YES
	Organism Scientific	:	STREPTOCOCCUS MUTANS
	Organism Taxid	:	1309
	Strain	:	CLARKE 1924
	Synonym	:	NON-PHOSPHORYLATING GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE [NADP+], TRIOSEPHOSPHATE DEHYDROGENASE

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (2, 11)

No.	Name	Count	Type	Full Name
1	NAP	4	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2	SO4	7	Ligand/Ion	SULFATE ION

Asymmetric Unit (11, 11)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:103 , THR A:285 , GLN A:436 , ARG A:437 , GLY A:438 , HOH A:3166	BINDING SITE FOR RESIDUE SO4 A 2001
02	AC2	SOFTWARE	ARG B:103 , GLN B:436 , ARG B:437 , GLY B:438	BINDING SITE FOR RESIDUE SO4 B 2002
03	AC3	SOFTWARE	ASP B:327 , THR B:328 , LYS B:329 , HOH B:3139 , GLU C:351	BINDING SITE FOR RESIDUE SO4 B 2003
04	AC4	SOFTWARE	ARG C:103 , GLN C:436 , ARG C:437 , GLY C:438	BINDING SITE FOR RESIDUE SO4 C 2004
05	AC5	SOFTWARE	ARG D:103 , THR D:285 , GLN D:436 , ARG D:437 , GLY D:438	BINDING SITE FOR RESIDUE SO4 D 2005
06	AC6	SOFTWARE	GLU A:351 , HOH A:3084 , ASP D:327 , THR D:328 , LYS D:329	BINDING SITE FOR RESIDUE SO4 D 2006
07	AC7	SOFTWARE	ALA D:26 , LYS D:88 , ASN D:315 , PRO D:316 , GLU D:317 , HOH D:3294 , HOH D:3304 , HOH D:3306	BINDING SITE FOR RESIDUE SO4 D 2007
08	AC8	SOFTWARE	ILE A:150 , SER A:151 , PRO A:152 , PHE A:153 , LEU A:159 , LYS A:177 , PRO A:178 , PRO A:179 , THR A:180 , GLY A:208 , ARG A:209 , GLY A:210 , GLY A:214 , ASP A:215 , VAL A:218 , PHE A:228 , SER A:229 , GLY A:230 , SER A:231 , ILE A:234 , GLU A:250 , LEU A:251 , GLY A:252 , CYS A:284 , GLU A:377 , PHE A:379 , LEU A:405 , ARG A:437 , PHE A:444 , HOH A:3131 , HOH A:3176 , HOH A:3182 , HOH A:3223	BINDING SITE FOR RESIDUE NAP A 3001
09	AC9	SOFTWARE	ILE B:150 , SER B:151 , PRO B:152 , PHE B:153 , LEU B:159 , LYS B:177 , PRO B:178 , PRO B:179 , THR B:180 , ARG B:209 , GLY B:210 , GLY B:214 , ASP B:215 , VAL B:218 , PHE B:228 , SER B:229 , GLY B:230 , SER B:231 , ILE B:234 , GLU B:250 , LEU B:251 , GLY B:252 , CYS B:284 , GLU B:377 , PHE B:379 , LEU B:405 , ARG B:437 , PHE B:444 , HOH B:3128 , HOH B:3176	BINDING SITE FOR RESIDUE NAP B 3002
10	BC1	SOFTWARE	ILE C:150 , SER C:151 , PRO C:152 , PHE C:153 , LEU C:159 , LYS C:177 , PRO C:178 , PRO C:179 , THR C:180 , GLY C:208 , ARG C:209 , GLY C:210 , GLY C:214 , ASP C:215 , VAL C:218 , PHE C:228 , SER C:229 , GLY C:230 , SER C:231 , ILE C:234 , GLU C:250 , LEU C:251 , GLY C:252 , CYS C:284 , GLU C:377 , PHE C:379 , LEU C:405 , ARG C:437 , PHE C:444 , HOH C:3130 , HOH C:3144 , HOH C:3304 , HOH C:3309	BINDING SITE FOR RESIDUE NAP C 3003
11	BC2	SOFTWARE	ILE D:150 , SER D:151 , PRO D:152 , PHE D:153 , LEU D:159 , LYS D:177 , PRO D:179 , THR D:180 , ARG D:209 , GLY D:210 , GLY D:214 , ASP D:215 , PHE D:228 , SER D:229 , GLY D:230 , SER D:231 , ILE D:234 , GLU D:250 , LEU D:251 , GLY D:252 , CYS D:284 , GLU D:377 , PHE D:379 , LEU D:405 , ARG D:437 , PHE D:444 , HOH D:3198 , HOH D:3284	BINDING SITE FOR RESIDUE NAP D 3004

(no "SS Bond" information available for 2ID2)

(no "Cis Peptide Bond" information available for 2ID2)

(no "SAP(SNP)/Variant" information available for 2ID2)

Asymmetric/Biological Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDEHYDE_DEHYDR_CYS	PS00070	Aldehyde dehydrogenases cysteine active site.	GAPN_STRMU	277-288	4	A:277-288 B:277-288 C:277-288 D:277-288

(no "Exon" information available for 2ID2)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:473
 aligned with GAPN_STRMU | Q59931 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:473
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472   
           GAPN_STRMU     3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
               SCOP domains d2id2a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2id2A01 A:3-251,A:451-474 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                      --2id2A02 A:254-446 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                      ----2id2A01                 - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee..eee....eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhh.eeeeeeeee..eeeee......hhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh.....eee.......hhhhhhhh....eeeee.hhhhhhhhhhhh....eeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeeehhhhhhhhhhhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhh..ee.....ee..ee..eeee.....hhhhh......eeeeeee.hhhhhhhhhhhh.ee.eeeee..hhhhhhhhhhhh...eeee...............ee..ee...hhhhhhhhheeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE_DEH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2id2 A   3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472

Chain B from PDB  Type:PROTEIN  Length:473
 aligned with GAPN_STRMU | Q59931 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:473
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472   
           GAPN_STRMU     3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
               SCOP domains d2id2b_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2id2B01 B:3-251,B:451-474 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                      --2id2B02 B:254-446 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                      ----2id2B01                 - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee..eee....eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhh.eeeeeeeee..eeeee......hhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh.....eee.......hhhhhhhh....eeeee.hhhhhhhhhhhhh...eeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeeehhhhhhhhhhhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhh..ee.....ee..ee..eeee.....hhhhh......eeeeeee.hhhhhhhhhhhh.ee.eeeee..hhhhhhhhhhhh...eeee...............ee..ee...hhhhhhhhheeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE_DEH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2id2 B   3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472

Chain C from PDB  Type:PROTEIN  Length:474
 aligned with GAPN_STRMU | Q59931 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:474
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471    
           GAPN_STRMU     2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
               SCOP domains d2id2c_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2id2C01 C:2-251,C:451-474 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                       --2id2C02 C:254-446 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                      ----2id2C01                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee..eee....eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhhh.eeeeeeeee..eeeee......hhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhh......eee.......hhhhhhhh....eeeee.hhhhhhhhhhhh....eeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhh.....hhhhh.......hhhhhhhhhhhhhhhhhh..ee.....ee..ee..eeee.....hhhhh......eeeeeee.hhhhhhhhhhhh.ee.eeeee..hhhhhhhhhhhh...eeee...............ee..ee...hhhhhhhhheeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE_DEH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2id2 C   2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471

Chain D from PDB  Type:PROTEIN  Length:474
 aligned with GAPN_STRMU | Q59931 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:474
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471    
           GAPN_STRMU     2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
               SCOP domains d2id2d_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 2id2D01 D:2-251,D:451-474 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                       --2id2D02 D:254-446 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                      ----2id2D01                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee..eee....eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhh.eeeeeeeee..eeeee......hhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh.....eee.......hhhhhhhh....eeeee.hhhhhhhhhhhh....eeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhh..ee.....ee..ee..eeee.....hhhhh......eeeeeee.hhhhhhhhhhhh.ee.eeeee..hhhhhhhhhhhh...eeee...............ee..ee...hhhhhhhhheeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE_DEH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2id2 D   2 TKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: ALDH-like (168)

Superfamily: ALDH-like (168)

Family: ALDH-like (76)

Protein domain: automated matches (24)

Streptococcus mutans [TaxId: 1309] (3)

1a	d2id2a_	A:
1b	d2id2b_	B:
1c	d2id2c_	C:
1d	d2id2d_	D:

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Aldehyde Dehydrogenase; Chain A, domain 1 (86)

Homologous Superfamily: Aldehyde Dehydrogenase; Chain A, domain 1 (86)

Streptococcus mutans. Organism_taxid: 1309. Strain: clarke 1924. (1)

1a	2id2C01	C:2-251,C:451-474
1b	2id2D01	D:2-251,D:451-474
1c	2id2A01	A:3-251,A:451-474
1d	2id2B01	B:3-251,B:451-474

Topology: Aldehyde Dehydrogenase; Chain A, domain 2 (89)

Homologous Superfamily: Aldehyde Dehydrogenase; Chain A, domain 2 (89)

Streptococcus mutans. Organism_taxid: 1309. Strain: clarke 1924. (1)

2a	2id2A02	A:254-446
2b	2id2B02	B:254-446
2c	2id2C02	C:254-446
2d	2id2D02	D:254-446

(no "Pfam Domain" information available for 2ID2)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (GAPN_STRMU | Q59931)

molecular function
	GO:0008886	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H(2)O + NADP(+) = 3-phospho-D-glycerate + 2 H(+) + NADPH.
	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
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	2id2
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	GAPN_STRMU \| Q59931
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	1.2.1.9
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	GAPN_STRMU \| Q59931	:	1euh 1qi1 1qi6 2esd 2euh 2qe0

(no "Related Entries Specified in the PDB File" available for 2ID2)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 11)

Sites (11, 11)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

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SCOP Domains (1, 4)

CATH Domains (2, 8)

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Gene Ontology (6, 6)

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Related Entries Specified in the PDB File