2H1S - JenaLib

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Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF A GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE FROM HOMO SAPIENS

Authors :   E. Bitto, G. E. Wesenberg, G. N. Phillips Jr. , C. A. Bingman, Center Fo Eukaryotic Structural Genomics (Cesg)

Date :   16 May 06 (Deposition) - 27 Jun 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.45

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Q9Ubq7, Glyoxylate Reductase, Hydroxypyruvate Reductase, Protein Structure Initiative, Psi, Center For Eukaryotic Structural Genomics, Cesg, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Bitto, G. E. Wesenberg, G. N. Phillips Jr. , C. A. Bingman, Center For Eukaryotic Structural Genomics (Cesg)
Crystal Structure Of A Glyoxylate/Hydroxypyruvate Reductase From Homo Sapiens
To Be Published
PubMed: search

Molecule 1 - GLYOXYLATE REDUCTASE/HYDROXYPYRUVATE REDUCTASE
	Chains	:	A, B, C, D
	EC Number	:	1.1.1.79
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PVP 16
	Expression System Strain	:	BL834 P(RARE2)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	GRHPR, GLXR
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 20)

No.	Name	Count	Type	Full Name
1	MSE	20	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 10)

No.	Name	Count	Type	Full Name
1	MSE	10	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (1, 10)

No.	Name	Count	Type	Full Name
1	MSE	10	Mod. Amino Acid	SELENOMETHIONINE

(no "Site" information available for 2H1S)

(no "SS Bond" information available for 2H1S)

Asymmetric Unit

No.	Residues
1	Ser A:272	-	Pro A:273
2	Glu A:274	-	Pro A:275
3	Ser B:272	-	Pro B:273
4	Glu B:274	-	Pro B:275
5	Ala C:71	-	Gly C:72
6	Ser C:272	-	Pro C:273
7	Glu C:274	-	Pro C:275
8	Ser D:272	-	Pro D:273
9	Glu D:274	-	Pro D:275

Asymmetric Unit (1, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_032762	R	170	Q	GRHPR_HUMAN	Polymorphism	12002324	A/B/C/D	R	170	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (1, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_032762	R	170	Q	GRHPR_HUMAN	Polymorphism	12002324	A/B	R	170	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (1, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_032762	R	170	Q	GRHPR_HUMAN	Polymorphism	12002324	C/D	R	170	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	D_2_HYDROXYACID_DH_3	PS00671	D-isomer specific 2-hydroxyacid dehydrogenases signature 3.	GRHPR_HUMAN	234-250	4	A:234-250 B:234-250 C:234-250 D:234-250

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	D_2_HYDROXYACID_DH_3	PS00671	D-isomer specific 2-hydroxyacid dehydrogenases signature 3.	GRHPR_HUMAN	234-250	2	A:234-250 B:234-250 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	D_2_HYDROXYACID_DH_3	PS00671	D-isomer specific 2-hydroxyacid dehydrogenases signature 3.	GRHPR_HUMAN	234-250	2	- - C:234-250 D:234-250

Asymmetric Unit (9, 36)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1b	ENST00000318158	1b	ENSE00001934486	chr9:37422663-37422830	168	GRHPR_HUMAN	1-28	28	4	A:6-28 B:6-28 C:6-28 D:6-28	23 23 23 23
1.2	ENST00000318158	2	ENSE00001258021	chr9:37424842-37424972	131	GRHPR_HUMAN	28-72	45	4	A:28-72 B:28-72 C:28-72 D:28-72	45 45 45 45
1.3a	ENST00000318158	3a	ENSE00001258055	chr9:37425919-37425991	73	GRHPR_HUMAN	72-96	25	4	A:72-96 B:72-96 C:72-96 D:72-96	25 25 25 25
1.3c	ENST00000318158	3c	ENSE00001257930	chr9:37426535-37426651	117	GRHPR_HUMAN	96-135	40	4	A:96-135 B:96-135 C:96-135 D:96-135	40 40 40 40
1.4b	ENST00000318158	4b	ENSE00001257990	chr9:37428481-37428569	89	GRHPR_HUMAN	135-165	31	4	A:135-165 B:135-165 C:135-165 D:135-165	31 31 31 31
1.4f	ENST00000318158	4f	ENSE00001149947	chr9:37429729-37429833	105	GRHPR_HUMAN	165-200	36	4	A:165-200 B:165-200 C:165-200 D:165-200	36 36 36 36
1.4h	ENST00000318158	4h	ENSE00001149942	chr9:37430508-37430643	136	GRHPR_HUMAN	200-245	46	4	A:200-245 B:200-245 C:200-245 D:200-245	46 46 46 46
1.4l	ENST00000318158	4l	ENSE00000928324	chr9:37432005-37432135	131	GRHPR_HUMAN	245-289	45	4	A:245-289 B:245-289 C:245-289 D:245-289	45 45 45 45
1.6e	ENST00000318158	6e	ENSE00001952551	chr9:37436658-37436987	330	GRHPR_HUMAN	289-328	40	4	A:289-326 B:289-326 C:289-326 D:289-326	38 38 38 38

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:321
 aligned with GRHPR_HUMAN | Q9UBQ7 from UniProtKB/Swiss-Prot  Length:328

    Alignment length:321
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325 
          GRHPR_HUMAN     6 LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL 326
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------2h1sA02 A:106-294 NAD(P)-binding Rossmann-like Domain                                                                                                                                        -------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhhh..eeeee.......hhhhhhhhhh...eeee......hhhhhhhhh....eeee........hhhhhhhh..eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeee..hhhhhhhhhhhhhhh..eeeee....hhhhhhhhh.ee.hhhhhhhhh.eeee............hhhhhhhh....eeee..hhhhhhhhhhhhhhhh....eeee...........hhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------Q------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D_2_HYDROXYACID_D---------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b  PDB: A:6-28 -------------------------------------------Exon 1.3a  PDB: A:72-96  --------------------------------------Exon 1.4b  PDB: A:135-165      ----------------------------------Exon 1.4h  PDB: A:200-245 UniProt: 200-245    -------------------------------------------Exon 1.6e  PDB: A:289-326 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) ----------------------Exon 1.2  PDB: A:28-72 UniProt: 28-72        -----------------------Exon 1.3c  PDB: A:96-135 UniProt: 96-135-----------------------------Exon 1.4f  PDB: A:165-200           --------------------------------------------Exon 1.4l  PDB: A:245-289 UniProt: 245-289   ------------------------------------- Transcript 1 (2)
                 2h1s A   6 LmKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTmSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKmKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTmSLLAANNLLAGLRGEPmPSEL 326
                             |      15        25        35        45        55        65        75     |  85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315      |325 
                             |                                                                        81-MSE                                                                                                                                                  234-MSE                                                                305-MSE          322-MSE
                             7-MSE

Chain B from PDB  Type:PROTEIN  Length:321
 aligned with GRHPR_HUMAN | Q9UBQ7 from UniProtKB/Swiss-Prot  Length:328

    Alignment length:321
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325 
          GRHPR_HUMAN     6 LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL 326
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------2h1sB02 B:106-294 NAD(P)-binding Rossmann-like Domain                                                                                                                                        -------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhhh..eeeee.......hhhhhhhhhh...eeee......hhhhhhhhh....eeee........hhhhhhhh..eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeee..hhhhhhhhhhhhhhh..eeeee....hhhhhhhhh.ee.hhhhhhhhh.eeee............hhhhhhhh....eeee..hhhhhhhhhhhhhhhhh...eeee...........hhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------Q------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D_2_HYDROXYACID_D---------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b  PDB: B:6-28 -------------------------------------------Exon 1.3a  PDB: B:72-96  --------------------------------------Exon 1.4b  PDB: B:135-165      ----------------------------------Exon 1.4h  PDB: B:200-245 UniProt: 200-245    -------------------------------------------Exon 1.6e  PDB: B:289-326 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) ----------------------Exon 1.2  PDB: B:28-72 UniProt: 28-72        -----------------------Exon 1.3c  PDB: B:96-135 UniProt: 96-135-----------------------------Exon 1.4f  PDB: B:165-200           --------------------------------------------Exon 1.4l  PDB: B:245-289 UniProt: 245-289   ------------------------------------- Transcript 1 (2)
                 2h1s B   6 LmKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTmSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKmKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTmSLLAANNLLAGLRGEPmPSEL 326
                             |      15        25        35        45        55        65        75     |  85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315      |325 
                             7-MSE                                                                    81-MSE                                                                                                                                                  234-MSE                                                                305-MSE          322-MSE

Chain C from PDB  Type:PROTEIN  Length:321
 aligned with GRHPR_HUMAN | Q9UBQ7 from UniProtKB/Swiss-Prot  Length:328

    Alignment length:321
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325 
          GRHPR_HUMAN     6 LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL 326
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------2h1sC02 C:106-294 NAD(P)-binding Rossmann-like Domain                                                                                                                                        -------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhh...eeeee.......hhhhhhhhhh.eeeeee......hhhhhhhhh....eeee........hhhhhhh...eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeee..hhhhhhhhhhhhhhh..eeeee....hhhhhhh...ee.hhhhhhhhh.eeee............hhhhhhhh....eeee..hhhhhhhhhhhhhhhh....eeee...........hhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------Q------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D_2_HYDROXYACID_D---------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b  PDB: C:6-28 -------------------------------------------Exon 1.3a  PDB: C:72-96  --------------------------------------Exon 1.4b  PDB: C:135-165      ----------------------------------Exon 1.4h  PDB: C:200-245 UniProt: 200-245    -------------------------------------------Exon 1.6e  PDB: C:289-326 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) ----------------------Exon 1.2  PDB: C:28-72 UniProt: 28-72        -----------------------Exon 1.3c  PDB: C:96-135 UniProt: 96-135-----------------------------Exon 1.4f  PDB: C:165-200           --------------------------------------------Exon 1.4l  PDB: C:245-289 UniProt: 245-289   ------------------------------------- Transcript 1 (2)
                 2h1s C   6 LmKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTmSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKmKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTmSLLAANNLLAGLRGEPmPSEL 326
                             |      15        25        35        45        55        65        75     |  85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315      |325 
                             7-MSE                                                                    81-MSE                                                                                                                                                  234-MSE                                                                305-MSE          322-MSE

Chain D from PDB  Type:PROTEIN  Length:321
 aligned with GRHPR_HUMAN | Q9UBQ7 from UniProtKB/Swiss-Prot  Length:328

    Alignment length:321
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325 
          GRHPR_HUMAN     6 LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL 326
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------2h1sD02 D:106-294 NAD(P)-binding Rossmann-like Domain                                                                                                                                        -------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhhh..eeeee.......hhhhhhhhhh...eeee......hhhhhhhhh....eeee........hhhhhhhh..eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeee..hhhhhhhhhhhhhhh..eeeee....hhhhhhh...ee.hhhhhhhhh.eeee............hhhhhhhh....eeee..hhhhhhhhhhhhhhhh....eeee...........hhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------Q------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D_2_HYDROXYACID_D---------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b  PDB: D:6-28 -------------------------------------------Exon 1.3a  PDB: D:72-96  --------------------------------------Exon 1.4b  PDB: D:135-165      ----------------------------------Exon 1.4h  PDB: D:200-245 UniProt: 200-245    -------------------------------------------Exon 1.6e  PDB: D:289-326 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) ----------------------Exon 1.2  PDB: D:28-72 UniProt: 28-72        -----------------------Exon 1.3c  PDB: D:96-135 UniProt: 96-135-----------------------------Exon 1.4f  PDB: D:165-200           --------------------------------------------Exon 1.4l  PDB: D:245-289 UniProt: 245-289   ------------------------------------- Transcript 1 (2)
                 2h1s D   6 LmKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTmSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKmKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTmSLLAANNLLAGLRGEPmPSEL 326
                             |      15        25        35        45        55        65        75     |  85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315      |325 
                             7-MSE                                                                    81-MSE                                                                                                                                                  234-MSE                                                                305-MSE          322-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2H1S)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Human (Homo sapiens) (188)

1a	2h1sA02	A:106-294
1b	2h1sB02	B:106-294
1c	2h1sC02	C:106-294
1d	2h1sD02	D:106-294

(no "Pfam Domain" information available for 2H1S)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (GRHPR_HUMAN | Q9UBQ7)

molecular function
	GO:0051287	NAD binding	Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
	GO:0050661	NADP binding	Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
	GO:0070402	NADPH binding	Interacting selectively and non-covalently with the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.
	GO:0031406	carboxylic acid binding	Interacting selectively and non-covalently with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
	GO:0008465	glycerate dehydrogenase activity	Catalysis of the reaction: (R)-glycerate + NAD+ = hydroxypyruvate + NADH + H+.
	GO:0030267	glyoxylate reductase (NADP) activity	Catalysis of the reaction: glycolate + NADP+ = glyoxylate + NADPH + H+.
	GO:0016618	hydroxypyruvate reductase activity	Catalysis of the reaction: D-glycerate + NADP+ = hydroxypyruvate + NADPH + H+.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
	GO:0043648	dicarboxylic acid metabolic process	The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-).
	GO:0007588	excretion	The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
	GO:0046487	glyoxylate metabolic process	The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0051259	protein oligomerization	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005782	peroxisomal matrix	The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Sites
(no "Sites" information available for 2h1s)

	Cis Peptide Bonds
		Ala C:71 - Gly C:72	[ RasMol ]
		Glu A:274 - Pro A:275	[ RasMol ]
		Glu B:274 - Pro B:275	[ RasMol ]
		Glu C:274 - Pro C:275	[ RasMol ]
		Glu D:274 - Pro D:275	[ RasMol ]
		Ser A:272 - Pro A:273	[ RasMol ]
		Ser B:272 - Pro B:273	[ RasMol ]
		Ser C:272 - Pro C:273	[ RasMol ]
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	2h1s
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		Orientation in Membranes	:	OPM
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	1.1.1.79
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	GRHPR_HUMAN \| Q9UBQ7
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UniProtKB/Swiss-Prot
	GRHPR_HUMAN \| Q9UBQ7	:	2gcg 2q50 2wwr

(no "Related Entries Specified in the PDB File" available for 2H1S)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 20)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (9, 9)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 4)

PROSITE Motifs (1, 4)

Exons (9, 36)

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CATH Domains (1, 4)

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Gene Ontology (20, 20)

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Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File