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(-) Description

Title :  SOLUTION NMR STRUCTURE OF PROTEIN PA22412 FROM PSEUDOMONAS AERUGINOSA. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PAT86, ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS TARGET PA2412.
 
Authors :  A. Lemak, J. A. Lukin, A. Yee, C. H. Arrowsmith, Northeast Structural Genomics Consortium (Nesg)
Date :  17 Apr 06  (Deposition) - 02 Jan 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Beta/Alpha Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Lemak, J. A. Lukin, A. Yee, C. H. Arrowsmith
Solution Structure Of Pa2412 Protein Determined Using Abacus Protocol
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN PA2412
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21 DE3(GOLD)
    Expression System Taxid: 562
    Expression System Vector Type: P11
    Gene: PA2412
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2GPF)

(-) Sites  (0, 0)

(no "Site" information available for 2GPF)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2GPF)

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Glu A:53 -Val A:54

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2GPF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2GPF)

(-) Exons   (0, 0)

(no "Exon" information available for 2GPF)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:72
 aligned with Q9I169_PSEAE | Q9I169 from UniProtKB/TrEMBL  Length:72

    Alignment length:72
                                    10        20        30        40        50        60        70  
          Q9I169_PSEAE    1 MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKAAG 72
               SCOP domains d2gpfa1 A:1-72 Uncharacterized protein PA2412                            SCOP domains
               CATH domains ---------2gpfA01 A:10-72                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeeeee....eeeee........eeeeeeeehhhhhhhhhhhh.....hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------ Transcript
                  2gpf A  1 MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKAAG 72
                                    10        20        30        40        50        60        70
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2GPF)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2GPF)

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  Cis Peptide Bonds
    Glu A:53 - Val A:54   [ RasMol ]  
 

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 Related Entries

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UniProtKB/TrEMBL
        Q9I169_PSEAE | Q9I169: 2pst 5ja2

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