Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Biological Unit 1
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
(-)Biological Unit 5
(-)Biological Unit 6
(-)Biological Unit 7
(-)Biological Unit 8
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)
Image Biological Unit 5
Biological Unit 5  (Jmol Viewer)
Image Biological Unit 6
Biological Unit 6  (Jmol Viewer)
Image Biological Unit 7
Biological Unit 7  (Jmol Viewer)
Image Biological Unit 8
Biological Unit 8  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY
 
Authors :  B. Golinelli-Pimpaneau, M. Knossow
Date :  07 Jul 94  (Deposition) - 30 Sep 94  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Biol. Unit 6:  K,L  (1x)
Biol. Unit 7:  M,N  (1x)
Biol. Unit 8:  O,P  (1x)
Keywords :  Immunoglobulin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Golinelli-Pimpaneau, B. Gigant, T. Bizebard, J. Navaza, P. Saludjian, R. Zemel, D. S. Tawfik, Z. Eshhar, B. S. Green, M. Knossow
Crystal Structure Of A Catalytic Antibody Fab With Esterase-Like Activity.
Structure V. 2 175 1994
PubMed-ID: 8069632  |  Reference-DOI: 10.1016/S0969-2126(00)00019-8
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - IGG2A CNJ206 FAB (LIGHT CHAIN)
    Chains: A, C, E, G, I, K, M, O
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
 
Molecule 2 - IGG2A CNJ206 FAB (HEAVY CHAIN)
    Chains: B, D, F, H, J, L, N, P
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit : ABCDEFGHIJKLMNOP
Biological Unit 1 (1x): AB              
Biological Unit 2 (1x):   CD            
Biological Unit 3 (1x):     EF          
Biological Unit 4 (1x):       GH        
Biological Unit 5 (1x):         IJ      
Biological Unit 6 (1x):           KL    
Biological Unit 7 (1x):             MN  
Biological Unit 8 (1x):               OP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2GFB)

(-) Sites  (0, 0)

(no "Site" information available for 2GFB)

(-) SS Bonds  (32, 32)

Asymmetric Unit
No.Residues
1A:23 -A:88
2A:134 -A:194
3B:22 -B:92
4B:142 -B:208
5C:23 -C:88
6C:134 -C:194
7D:22 -D:92
8D:142 -D:208
9E:23 -E:88
10E:134 -E:194
11F:22 -F:92
12F:142 -F:208
13G:23 -G:88
14G:134 -G:194
15H:22 -H:92
16H:142 -H:208
17I:23 -I:88
18I:134 -I:194
19J:22 -J:92
20J:142 -J:208
21K:23 -K:88
22K:134 -K:194
23L:22 -L:92
24L:142 -L:208
25M:23 -M:88
26M:134 -M:194
27N:22 -N:92
28N:142 -N:208
29O:23 -O:88
30O:134 -O:194
31P:22 -P:92
32P:142 -P:208

(-) Cis Peptide Bonds  (40, 40)

Asymmetric Unit
No.Residues
1Ser A:7 -Pro A:8
2Tyr A:140 -Pro A:141
3Phe B:148 -Pro B:149
4Glu B:150 -Pro B:151
5Trp B:199 -Pro B:200
6Ser C:7 -Pro C:8
7Tyr C:140 -Pro C:141
8Phe D:148 -Pro D:149
9Glu D:150 -Pro D:151
10Trp D:199 -Pro D:200
11Ser E:7 -Pro E:8
12Tyr E:140 -Pro E:141
13Phe F:148 -Pro F:149
14Glu F:150 -Pro F:151
15Trp F:199 -Pro F:200
16Ser G:7 -Pro G:8
17Tyr G:140 -Pro G:141
18Phe H:148 -Pro H:149
19Glu H:150 -Pro H:151
20Trp H:199 -Pro H:200
21Ser I:7 -Pro I:8
22Tyr I:140 -Pro I:141
23Phe J:148 -Pro J:149
24Glu J:150 -Pro J:151
25Trp J:199 -Pro J:200
26Ser K:7 -Pro K:8
27Tyr K:140 -Pro K:141
28Phe L:148 -Pro L:149
29Glu L:150 -Pro L:151
30Trp L:199 -Pro L:200
31Ser M:7 -Pro M:8
32Tyr M:140 -Pro M:141
33Phe N:148 -Pro N:149
34Glu N:150 -Pro N:151
35Trp N:199 -Pro N:200
36Ser O:7 -Pro O:8
37Tyr O:140 -Pro O:141
38Phe P:148 -Pro P:149
39Glu P:150 -Pro P:151
40Trp P:199 -Pro P:200

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2GFB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2GFB)

(-) Exons   (0, 0)

(no "Exon" information available for 2GFB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfba1 A:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfba2 A:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbA01 A:1-108 Immunoglobulins                                                                             2gfbA02 A:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee...ee...eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb A    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain B from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbb1 B:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbb2 B:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbB01 B:1-113 Immunoglobulins                                                                                        2gfbB02 B:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh.....eeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb B    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain C from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbc1 C:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbc2 C:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbC01 C:1-108 Immunoglobulins                                                                             2gfbC02 C:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee...ee...eeeee.........eeeeeeeeeehhhhhh..eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb C    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain D from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbd1 D:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbd2 D:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbD01 D:1-113 Immunoglobulins                                                                                        2gfbD02 D:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh.....eeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb D    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain E from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbe1 E:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbe2 E:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbE01 E:1-108 Immunoglobulins                                                                             2gfbE02 E:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb E    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain F from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbf1 F:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbf2 F:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbF01 F:1-113 Immunoglobulins                                                                                        2gfbF02 F:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb F    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain G from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbg1 G:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbg2 G:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbG01 G:1-108 Immunoglobulins                                                                             2gfbG02 G:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee...ee...eeeee.........eeeeeeeeeehhhhhh..eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb G    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain H from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbh1 H:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbh2 H:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbH01 H:1-113 Immunoglobulins                                                                                        2gfbH02 H:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb H    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain I from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbi1 I:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbi2 I:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbI01 I:1-108 Immunoglobulins                                                                             2gfbI02 I:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb I    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain J from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbj1 J:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbj2 J:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbJ01 J:1-113 Immunoglobulins                                                                                        2gfbJ02 J:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb J    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain K from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbk1 K:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbk2 K:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbK01 K:1-108 Immunoglobulins                                                                             2gfbK02 K:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb K    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain L from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbl1 L:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbl2 L:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbL01 L:1-113 Immunoglobulins                                                                                        2gfbL02 L:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee........eeeeeeehhhheeeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb L    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain M from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbm1 M:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbm2 M:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbM01 M:1-108 Immunoglobulins                                                                             2gfbM02 M:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee...ee...eeeee.........eeeeeeeeeehhhhh....eeeeeee......eee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb M    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain N from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbn1 N:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbn2 N:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbN01 N:1-113 Immunoglobulins                                                                                        2gfbN02 N:115-227 Immunoglobulins                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee...............eeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb N    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202                        


Chain O from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains d2gfbo1 O:1-108 Immunoglobulin light chain kappa variable domain, VL-kappa                                  d2gfbo2 O:109-214 Immunoglobulin light chain kappa constant domain, CL-kappa                               SCOP domains
               CATH domains 2gfbO01 O:1-108 Immunoglobulins                                                                             2gfbO02 O:109-211 Immunoglobulins                                                                      --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeeee......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb O    1 QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC  214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain P from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                            
               SCOP domains d2gfbp1 P:1-119 Immunoglobulin heavy chain variable domain, VH                                                              d2gfbp2 P:120-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                 SCOP domains
               CATH domains 2gfbP01 P:1-113 Immunoglobulins                                                                                        2gfbP02 P:115-219 Immunoglobulins                                                           -------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeee..............eeeee.......eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee........eeeeeeehhhheeeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2gfb P    1 DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG  227
                                    10        20        30        40        50  |     59        69        79   |||  86        96    || 104       115       125    || 137       147      |162      |173      |185       195|| ||  208       218         
                                                                              52A                            82A||               100A|          113|            130|                  154|||    169|      180|          196| || 206|                   
                                                                                                              82B|                100B           115             133                   156||     171       183           198 ||  208                   
                                                                                                               82C                                                                      157|                               200|                        
                                                                                                                                                                                         162                                202
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 32)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 32)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Immunoglobulin-like (3897)
(-)
Homologous Superfamily: Immunoglobulins (2282)
(-)
House mouse (Mus musculus) (616)
1a2gfbA02A:109-211
1b2gfbB02B:115-227
1c2gfbD02D:115-227
1d2gfbF02F:115-227
1e2gfbH02H:115-227
1f2gfbJ02J:115-227
1g2gfbL02L:115-227
1h2gfbN02N:115-227
1i2gfbP02P:115-219
1j2gfbB01B:1-113
1k2gfbD01D:1-113
1l2gfbF01F:1-113
1m2gfbH01H:1-113
1n2gfbJ01J:1-113
1o2gfbL01L:1-113
1p2gfbN01N:1-113
1q2gfbP01P:1-113
1r2gfbC02C:109-211
1s2gfbE02E:109-211
1t2gfbG02G:109-211
1u2gfbI02I:109-211
1v2gfbK02K:109-211
1w2gfbM02M:109-211
1x2gfbO02O:109-211
1y2gfbA01A:1-108
1z2gfbC01C:1-108
1aa2gfbE01E:1-108
1ab2gfbG01G:1-108
1ac2gfbI01I:1-108
1ad2gfbK01K:1-108
1ae2gfbM01M:1-108
1af2gfbO01O:1-108

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2GFB)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2GFB)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 2gfb)
 
  Sites
(no "Sites" information available for 2gfb)
 
  Cis Peptide Bonds
    Glu B:150 - Pro B:151   [ RasMol ]  
    Glu D:150 - Pro D:151   [ RasMol ]  
    Glu F:150 - Pro F:151   [ RasMol ]  
    Glu H:150 - Pro H:151   [ RasMol ]  
    Glu J:150 - Pro J:151   [ RasMol ]  
    Glu L:150 - Pro L:151   [ RasMol ]  
    Glu N:150 - Pro N:151   [ RasMol ]  
    Glu P:150 - Pro P:151   [ RasMol ]  
    Phe B:148 - Pro B:149   [ RasMol ]  
    Phe D:148 - Pro D:149   [ RasMol ]  
    Phe F:148 - Pro F:149   [ RasMol ]  
    Phe H:148 - Pro H:149   [ RasMol ]  
    Phe J:148 - Pro J:149   [ RasMol ]  
    Phe L:148 - Pro L:149   [ RasMol ]  
    Phe N:148 - Pro N:149   [ RasMol ]  
    Phe P:148 - Pro P:149   [ RasMol ]  
    Ser A:7 - Pro A:8   [ RasMol ]  
    Ser C:7 - Pro C:8   [ RasMol ]  
    Ser E:7 - Pro E:8   [ RasMol ]  
    Ser G:7 - Pro G:8   [ RasMol ]  
    Ser I:7 - Pro I:8   [ RasMol ]  
    Ser K:7 - Pro K:8   [ RasMol ]  
    Ser M:7 - Pro M:8   [ RasMol ]  
    Ser O:7 - Pro O:8   [ RasMol ]  
    Trp B:199 - Pro B:200   [ RasMol ]  
    Trp D:199 - Pro D:200   [ RasMol ]  
    Trp F:199 - Pro F:200   [ RasMol ]  
    Trp H:199 - Pro H:200   [ RasMol ]  
    Trp J:199 - Pro J:200   [ RasMol ]  
    Trp L:199 - Pro L:200   [ RasMol ]  
    Trp N:199 - Pro N:200   [ RasMol ]  
    Trp P:199 - Pro P:200   [ RasMol ]  
    Tyr A:140 - Pro A:141   [ RasMol ]  
    Tyr C:140 - Pro C:141   [ RasMol ]  
    Tyr E:140 - Pro E:141   [ RasMol ]  
    Tyr G:140 - Pro G:141   [ RasMol ]  
    Tyr I:140 - Pro I:141   [ RasMol ]  
    Tyr K:140 - Pro K:141   [ RasMol ]  
    Tyr M:140 - Pro M:141   [ RasMol ]  
    Tyr O:140 - Pro O:141   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]
    Biological Unit 5  [ Jena3D ]
    Biological Unit 6  [ Jena3D ]
    Biological Unit 7  [ Jena3D ]
    Biological Unit 8  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Biol. Unit 1 PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format | Biol. Unit 5 PNG format | Biol. Unit 6 PNG format | Biol. Unit 7 PNG format | Biol. Unit 8 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2gfb
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  (no 'UniProt ID/Accession number' available) |
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  (no 'UniProt ID/Accession number' available) |
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2GFB)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2GFB)