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2GFB
Biol. Unit 1
Info
Asym.Unit (533 KB)
Biol.Unit 1 (75 KB)
Biol.Unit 2 (75 KB)
Biol.Unit 3 (75 KB)
Biol.Unit 4 (76 KB)
Biol.Unit 5 (75 KB)
Biol.Unit 6 (75 KB)
Biol.Unit 7 (75 KB)
Biol.Unit 8 (76 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY
Authors
:
B. Golinelli-Pimpaneau, M. Knossow
Date
:
07 Jul 94 (Deposition) - 30 Sep 94 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: O,P (1x)
Keywords
:
Immunoglobulin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
B. Golinelli-Pimpaneau, B. Gigant, T. Bizebard, J. Navaza, P. Saludjian, R. Zemel, D. S. Tawfik, Z. Eshhar, B. S. Green, M. Knossow
Crystal Structure Of A Catalytic Antibody Fab With Esterase-Like Activity.
Structure V. 2 175 1994
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 32)
Info
All SCOP Domains
1a: SCOP_d2gfbb2 (B:120-227)
1b: SCOP_d2gfbd2 (D:120-227)
1c: SCOP_d2gfbf2 (F:120-227)
1d: SCOP_d2gfbh2 (H:120-227)
1e: SCOP_d2gfbj2 (J:120-227)
1f: SCOP_d2gfbl2 (L:120-227)
1g: SCOP_d2gfbn2 (N:120-227)
1h: SCOP_d2gfbp2 (P:120-227)
2a: SCOP_d2gfba2 (A:109-214)
2b: SCOP_d2gfbc2 (C:109-214)
2c: SCOP_d2gfbe2 (E:109-214)
2d: SCOP_d2gfbg2 (G:109-214)
2e: SCOP_d2gfbi2 (I:109-214)
2f: SCOP_d2gfbk2 (K:109-214)
2g: SCOP_d2gfbm2 (M:109-214)
2h: SCOP_d2gfbo2 (O:109-214)
3a: SCOP_d2gfbb1 (B:1-119)
3b: SCOP_d2gfbd1 (D:1-119)
3c: SCOP_d2gfbf1 (F:1-119)
3d: SCOP_d2gfbh1 (H:1-119)
3e: SCOP_d2gfbj1 (J:1-119)
3f: SCOP_d2gfbl1 (L:1-119)
3g: SCOP_d2gfbn1 (N:1-119)
3h: SCOP_d2gfbp1 (P:1-119)
4a: SCOP_d2gfba1 (A:1-108)
4b: SCOP_d2gfbc1 (C:1-108)
4c: SCOP_d2gfbe1 (E:1-108)
4d: SCOP_d2gfbg1 (G:1-108)
4e: SCOP_d2gfbi1 (I:1-108)
4f: SCOP_d2gfbk1 (K:1-108)
4g: SCOP_d2gfbm1 (M:1-108)
4h: SCOP_d2gfbo1 (O:1-108)
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)
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)
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)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Mouse (Mus musculus) [TaxId: 10090]
(414)
1a
d2gfbb2
B:120-227
1b
d2gfbd2
D:120-227
1c
d2gfbf2
F:120-227
1d
d2gfbh2
H:120-227
1e
d2gfbj2
J:120-227
1f
d2gfbl2
L:120-227
1g
d2gfbn2
N:120-227
1h
d2gfbp2
P:120-227
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Mouse (Mus musculus) [TaxId: 10090]
(345)
2a
d2gfba2
A:109-214
2b
d2gfbc2
C:109-214
2c
d2gfbe2
E:109-214
2d
d2gfbg2
G:109-214
2e
d2gfbi2
I:109-214
2f
d2gfbk2
K:109-214
2g
d2gfbm2
M:109-214
2h
d2gfbo2
O:109-214
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
(58)
3a
d2gfbb1
B:1-119
3b
d2gfbd1
D:1-119
3c
d2gfbf1
F:1-119
3d
d2gfbh1
H:1-119
3e
d2gfbj1
J:1-119
3f
d2gfbl1
L:1-119
3g
d2gfbn1
N:1-119
3h
d2gfbp1
P:1-119
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Mouse (Mus musculus), cluster 4 [TaxId: 10090]
(211)
4a
d2gfba1
A:1-108
4b
d2gfbc1
C:1-108
4c
d2gfbe1
E:1-108
4d
d2gfbg1
G:1-108
4e
d2gfbi1
I:1-108
4f
d2gfbk1
K:1-108
4g
d2gfbm1
M:1-108
4h
d2gfbo1
O:1-108
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CATH Domains
(1, 32)
Info
all CATH domains
1a: CATH_2gfbA02 (A:109-211)
1b: CATH_2gfbB02 (B:115-227)
1c: CATH_2gfbD02 (D:115-227)
1d: CATH_2gfbF02 (F:115-227)
1e: CATH_2gfbH02 (H:115-227)
1f: CATH_2gfbJ02 (J:115-227)
1g: CATH_2gfbL02 (L:115-227)
1h: CATH_2gfbN02 (N:115-227)
1i: CATH_2gfbP02 (P:115-219)
1j: CATH_2gfbB01 (B:1-113)
1k: CATH_2gfbD01 (D:1-113)
1l: CATH_2gfbF01 (F:1-113)
1m: CATH_2gfbH01 (H:1-113)
1n: CATH_2gfbJ01 (J:1-113)
1o: CATH_2gfbL01 (L:1-113)
1p: CATH_2gfbN01 (N:1-113)
1q: CATH_2gfbP01 (P:1-113)
1r: CATH_2gfbC02 (C:109-211)
1s: CATH_2gfbE02 (E:109-211)
1t: CATH_2gfbG02 (G:109-211)
1u: CATH_2gfbI02 (I:109-211)
1v: CATH_2gfbK02 (K:109-211)
1w: CATH_2gfbM02 (M:109-211)
1x: CATH_2gfbO02 (O:109-211)
1y: CATH_2gfbA01 (A:1-108)
1z: CATH_2gfbC01 (C:1-108)
1aa: CATH_2gfbE01 (E:1-108)
1ab: CATH_2gfbG01 (G:1-108)
1ac: CATH_2gfbI01 (I:1-108)
1ad: CATH_2gfbK01 (K:1-108)
1ae: CATH_2gfbM01 (M:1-108)
1af: CATH_2gfbO01 (O:1-108)
View:
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)
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)
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
House mouse (Mus musculus)
(616)
1a
2gfbA02
A:109-211
1b
2gfbB02
B:115-227
1c
2gfbD02
D:115-227
1d
2gfbF02
F:115-227
1e
2gfbH02
H:115-227
1f
2gfbJ02
J:115-227
1g
2gfbL02
L:115-227
1h
2gfbN02
N:115-227
1i
2gfbP02
P:115-219
1j
2gfbB01
B:1-113
1k
2gfbD01
D:1-113
1l
2gfbF01
F:1-113
1m
2gfbH01
H:1-113
1n
2gfbJ01
J:1-113
1o
2gfbL01
L:1-113
1p
2gfbN01
N:1-113
1q
2gfbP01
P:1-113
1r
2gfbC02
C:109-211
1s
2gfbE02
E:109-211
1t
2gfbG02
G:109-211
1u
2gfbI02
I:109-211
1v
2gfbK02
K:109-211
1w
2gfbM02
M:109-211
1x
2gfbO02
O:109-211
1y
2gfbA01
A:1-108
1z
2gfbC01
C:1-108
1aa
2gfbE01
E:1-108
1ab
2gfbG01
G:1-108
1ac
2gfbI01
I:1-108
1ad
2gfbK01
K:1-108
1ae
2gfbM01
M:1-108
1af
2gfbO01
O:1-108
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Pfam Domains
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