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(-) Description

Title :  THE FIBRILLAR TIP COMPLEX OF THE AFA/DR ADHESINS FROM PATHOGEN E. COLI DISPLAYS SYNERGISTIC BINDING TO 5 1 AND V 3 INTEGRINS
 
Authors :  E. Cota, P. Simpson, K. L. Anderson, S. J. Matthews
Date :  31 Jan 06  (Deposition) - 27 Feb 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A
Keywords :  Afad, Afae, Fibrillar, Afimbrial, Integrin-Binding, Daec, Daf, Ceacam, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Cota, C. Jones, P. Simpson, H. Altroff, K. L. Anderson, L. Du Merle, J. Guignot, A. Servin, C. Le Bouguenec, H. Mardon, S. Matthews
The Solution Structure Of The Invasive Tip Complex From Afa/Dr Fibrils
Mol. Microbiol. V. 62 356 2006
PubMed-ID: 16965519  |  Reference-DOI: 10.1111/J.1365-2958.2006.05375.X
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN AFAD
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

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NMR Structure : 

Summary Information (see also Sequences/Alignments below)

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(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:29 -A:117

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:142
 aligned with AFAD_ECOLX | Q47038 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:142
                                                                                                                                                   147                    
                                    35        45        55        65        75        85        95       105       115       125       135       145 |       -         -  
           AFAD_ECOLX    26 AAELHLESRGGSGTQLRDGAKVATGRIICREAHTGFHVWMNERQVDGRAERYVVQSKDGRHELRVRTGGDGWSPVKGEGGKGVSRPGQEEQVFFDVMADGNQDIAPGEYRFSVGGACVVPQE--------------------   -
               SCOP domains -d2fvna1 A:2-122 Invasin AfaD                                                                                             -------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeee..ee.......eee...............ee......ee.........ee........eee.....ee..eee.........eeee...........................eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fvn A   1 SAELHLESRGGSGTQLRDGAKVATGRIICREAHTGFHVWMNERQVDGRAERYVVQSKDGRHELRVRTGGDGWSPVKGEGGKGVSRPGQEEQVFFDVMADGNQDIAPGEYRFSVGGACVVPQEDNKQGFTPSGTTGTTKLTVT 142
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AFAD_ECOLX | Q47038: 2axw 2ixq

(-) Related Entries Specified in the PDB File

1rxl SOLUTION STRUCTURE OF THE AFAE ADHESIN