2FVL - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF HUMAN 3-ALPHA HYDROXYSTEROID/DIHYDRODIOL DEHYDROGENASE (AKR1C4) COMPLEXED WITH NADP+

Authors :   E. Ugochukwu, C. Smee, K. Guo, P. Lukacik, K. Kavanagh, J. E. Debreczeni Delft, J. Weigelt, M. Sundstrom, C. Arrowsmith, A. Edwards, U. Opperm Structural Genomics Consortium (Sgc)

Date :   31 Jan 06 (Deposition) - 21 Feb 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.40

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Chlordecone Reductase, Aldo-Keto Reductase, 3Alpha-Hsd1, Dd4, Structural Genomics, Structural Genomics Consortium, Sgc, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Ugochukwu, C. Smee, K. Guo, P. Lukacik, K. Kavanagh, J. E. Debreczeni, F. Von Delft, J. Weigelt, M. Sundstrom, C. Arrowsmith, A. Edwards, U. Oppermann
Crystal Structure Of Human 3-Alpha Hydroxysteroid/Dihydrodiol Dehydrogenase (Akr1C4) Complexed With Nadp+
To Be Published
PubMed: search

Molecule 1 - ALDO-KETO REDUCTASE FAMILY 1, MEMBER C4
	Chains	:	A, B, C
	EC Number	:	1.1.1.225, 1.1.1.50
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Strain	:	BL21 (DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	AKR1C4
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	3-ALPHA HYDROXYSTEROID/DIHYDRODIOL DEHYDROGENASE

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 3)

No.	Name	Count	Type	Full Name
1	NAP	3	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:22 , THR A:23 , TYR A:24 , ASP A:50 , TYR A:55 , HIS A:117 , SER A:166 , ASN A:167 , GLN A:190 , HIS A:216 , SER A:217 , ALA A:218 , LEU A:219 , GLY A:220 , THR A:221 , GLN A:222 , ALA A:253 , LEU A:268 , LYS A:270 , SER A:271 , TYR A:272 , ARG A:276 , GLU A:279 , ASN A:280 , HOH A:1052 , HOH A:1059 , HOH A:1084 , HOH A:1102 , HOH A:1232 , HOH A:1262 , HOH C:1169 , HOH C:1210	BINDING SITE FOR RESIDUE NAP A 1001
2	AC2	SOFTWARE	GLY C:22 , THR C:23 , TYR C:24 , ASP C:50 , TYR C:55 , HIS C:117 , SER C:166 , ASN C:167 , GLN C:190 , HIS C:216 , SER C:217 , ALA C:218 , LEU C:219 , GLY C:220 , THR C:221 , GLN C:222 , ALA C:253 , LEU C:268 , LYS C:270 , SER C:271 , TYR C:272 , ARG C:276 , GLU C:279 , ASN C:280 , HOH C:1015 , HOH C:1018 , HOH C:1042 , HOH C:1123 , HOH C:1156 , HOH C:1179 , HOH C:1279	BINDING SITE FOR RESIDUE NAP C 1002
3	AC3	SOFTWARE	GLY B:22 , THR B:23 , TYR B:24 , ASP B:50 , TYR B:55 , HIS B:117 , SER B:166 , ASN B:167 , GLN B:190 , HIS B:216 , SER B:217 , ALA B:218 , LEU B:219 , GLY B:220 , THR B:221 , GLN B:222 , ALA B:253 , LEU B:268 , LYS B:270 , SER B:271 , TYR B:272 , ASN B:273 , ARG B:276 , GLU B:279 , ASN B:280 , HOH B:1133 , HOH B:1142	BINDING SITE FOR RESIDUE NAP B 1003

(no "SS Bond" information available for 2FVL)

(no "Cis Peptide Bond" information available for 2FVL)

Asymmetric Unit (5, 15)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_028240	G	135	E	AK1C4_HUMAN	Polymorphism	11253043	A/B/C	G	135	E
2	UniProt	VAR_013290	S	145	C	AK1C4_HUMAN	Polymorphism	3829125	A/B/C	S	145	C
3	UniProt	VAR_028241	C	170	Y	AK1C4_HUMAN	Polymorphism	17851824	A/B/C	Y	170	Y
4	UniProt	VAR_028242	Q	250	R	AK1C4_HUMAN	Polymorphism	4880718	A/B/C	R	250	R
5	UniProt	VAR_013291	L	311	V	AK1C4_HUMAN	Polymorphism	17134592	A/B/C	L	311	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (5, 5)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_028240	G	135	E	AK1C4_HUMAN	Polymorphism	11253043	A	G	135	E
2	UniProt	VAR_013290	S	145	C	AK1C4_HUMAN	Polymorphism	3829125	A	S	145	C
3	UniProt	VAR_028241	C	170	Y	AK1C4_HUMAN	Polymorphism	17851824	A	Y	170	Y
4	UniProt	VAR_028242	Q	250	R	AK1C4_HUMAN	Polymorphism	4880718	A	R	250	R
5	UniProt	VAR_013291	L	311	V	AK1C4_HUMAN	Polymorphism	17134592	A	L	311	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (5, 5)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_028240	G	135	E	AK1C4_HUMAN	Polymorphism	11253043	B	G	135	E
2	UniProt	VAR_013290	S	145	C	AK1C4_HUMAN	Polymorphism	3829125	B	S	145	C
3	UniProt	VAR_028241	C	170	Y	AK1C4_HUMAN	Polymorphism	17851824	B	Y	170	Y
4	UniProt	VAR_028242	Q	250	R	AK1C4_HUMAN	Polymorphism	4880718	B	R	250	R
5	UniProt	VAR_013291	L	311	V	AK1C4_HUMAN	Polymorphism	17134592	B	L	311	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (5, 5)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_028240	G	135	E	AK1C4_HUMAN	Polymorphism	11253043	C	G	135	E
2	UniProt	VAR_013290	S	145	C	AK1C4_HUMAN	Polymorphism	3829125	C	S	145	C
3	UniProt	VAR_028241	C	170	Y	AK1C4_HUMAN	Polymorphism	17851824	C	Y	170	Y
4	UniProt	VAR_028242	Q	250	R	AK1C4_HUMAN	Polymorphism	4880718	C	R	250	R
5	UniProt	VAR_013291	L	311	V	AK1C4_HUMAN	Polymorphism	17134592	C	L	311	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (3, 9)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDOKETO_REDUCTASE_1	PS00798	Aldo/keto reductase family signature 1.	AK1C4_HUMAN	45-62	3	A:45-62 B:45-62 C:45-62
2	ALDOKETO_REDUCTASE_2	PS00062	Aldo/keto reductase family signature 2.	AK1C4_HUMAN	151-168	3	A:151-168 B:151-168 C:151-168
3	ALDOKETO_REDUCTASE_3	PS00063	Aldo/keto reductase family putative active site signature.	AK1C4_HUMAN	268-283	3	A:268-283 B:268-283 C:268-283

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDOKETO_REDUCTASE_1	PS00798	Aldo/keto reductase family signature 1.	AK1C4_HUMAN	45-62	1	A:45-62 - -
2	ALDOKETO_REDUCTASE_2	PS00062	Aldo/keto reductase family signature 2.	AK1C4_HUMAN	151-168	1	A:151-168 - -
3	ALDOKETO_REDUCTASE_3	PS00063	Aldo/keto reductase family putative active site signature.	AK1C4_HUMAN	268-283	1	A:268-283 - -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDOKETO_REDUCTASE_1	PS00798	Aldo/keto reductase family signature 1.	AK1C4_HUMAN	45-62	1	- B:45-62 -
2	ALDOKETO_REDUCTASE_2	PS00062	Aldo/keto reductase family signature 2.	AK1C4_HUMAN	151-168	1	- B:151-168 -
3	ALDOKETO_REDUCTASE_3	PS00063	Aldo/keto reductase family putative active site signature.	AK1C4_HUMAN	268-283	1	- B:268-283 -

Biological Unit 3 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDOKETO_REDUCTASE_1	PS00798	Aldo/keto reductase family signature 1.	AK1C4_HUMAN	45-62	1	- - C:45-62
2	ALDOKETO_REDUCTASE_2	PS00062	Aldo/keto reductase family signature 2.	AK1C4_HUMAN	151-168	1	- - C:151-168
3	ALDOKETO_REDUCTASE_3	PS00063	Aldo/keto reductase family putative active site signature.	AK1C4_HUMAN	268-283	1	- - C:268-283

Asymmetric Unit (9, 27)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000380448	1	ENSE00001485164	chr10:5237426-5237538	113	AK1C4_HUMAN	-	0	0	-	-
1.2a	ENST00000380448	2a	ENSE00001485161	chr10:5238192-5238283	92	AK1C4_HUMAN	-	0	0	-	-
1.2c	ENST00000380448	2c	ENSE00001485159	chr10:5238783-5238914	132	AK1C4_HUMAN	1-28	28	3	A:1-28 B:1-28 C:1-28	28 28 28
1.3	ENST00000380448	3	ENSE00001791891	chr10:5242144-5242311	168	AK1C4_HUMAN	29-84	56	3	A:29-84 B:29-84 C:29-84	56 56 56
1.4	ENST00000380448	4	ENSE00001702720	chr10:5246340-5246456	117	AK1C4_HUMAN	85-123	39	3	A:85-123 B:85-123 C:85-123	39 39 39
1.6	ENST00000380448	6	ENSE00000688888	chr10:5247720-5247797	78	AK1C4_HUMAN	124-149	26	3	A:124-149 B:124-149 C:124-149	26 26 26
1.7	ENST00000380448	7	ENSE00001677400	chr10:5248238-5248360	123	AK1C4_HUMAN	150-190	41	3	A:150-190 B:150-190 C:150-190	41 41 41
1.8	ENST00000380448	8	ENSE00001800428	chr10:5254579-5254688	110	AK1C4_HUMAN	191-227	37	3	A:191-227 B:191-227 C:191-227	37 37 37
1.9	ENST00000380448	9	ENSE00001628752	chr10:5254957-5255122	166	AK1C4_HUMAN	227-282	56	3	A:227-282 B:227-282 C:227-282	56 56 56
1.10	ENST00000380448	10	ENSE00001336293	chr10:5258674-5258756	83	AK1C4_HUMAN	283-310	28	3	A:283-310 B:283-310 C:283-310	28 28 28
1.11	ENST00000380448	11	ENSE00001132424	chr10:5260681-5260912	232	AK1C4_HUMAN	310-323	14	3	A:310-323 B:310-323 C:310-323	14 14 14

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:323
 aligned with AK1C4_HUMAN | P17516 from UniProtKB/Swiss-Prot  Length:323

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
          AK1C4_HUMAN     1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
               SCOP domains d2fvla_ A: automated matches                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 2fvlA00 A:1-323 NADP-dependent oxidoreductase                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eee.....eee.eeee.........hhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhhh..hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh...eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhh..hhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh..hhhhhhhhhh.........hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------E---------C------------------------Y-------------------------------------------------------------------------------R------------------------------------------------------------V------------ SAPs(SNPs)
                    PROSITE --------------------------------------------ALDOKETO_REDUCTASE----------------------------------------------------------------------------------------ALDOKETO_REDUCTASE---------------------------------------------------------------------------------------------------ALDOKETO_REDUCTA---------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2c  PDB: A:1-28      Exon 1.3  PDB: A:29-84 UniProt: 29-84                   Exon 1.4  PDB: A:85-123 UniProt: 85-123Exon 1.6  PDB: A:124-149  Exon 1.7  PDB: A:150-190 UniProt: 150-190Exon 1.8  PDB: A:191-227             -------------------------------------------------------Exon 1.10  PDB: A:283-310   ------------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:227-282 UniProt: 227-282               ---------------------------Exon 1.11      Transcript 1 (2)
                 2fvl A   1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain B from PDB  Type:PROTEIN  Length:323
 aligned with AK1C4_HUMAN | P17516 from UniProtKB/Swiss-Prot  Length:323

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
          AK1C4_HUMAN     1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
               SCOP domains d2fvlb_ B: automated matches                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 2fvlB00 B:1-323 NADP-dependent oxidoreductase                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eee.....eee.eeee.........hhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh...eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhh..hhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh..hhhhhhhhhh.........hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------E---------C------------------------Y-------------------------------------------------------------------------------R------------------------------------------------------------V------------ SAPs(SNPs)
                    PROSITE --------------------------------------------ALDOKETO_REDUCTASE----------------------------------------------------------------------------------------ALDOKETO_REDUCTASE---------------------------------------------------------------------------------------------------ALDOKETO_REDUCTA---------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2c  PDB: B:1-28      Exon 1.3  PDB: B:29-84 UniProt: 29-84                   Exon 1.4  PDB: B:85-123 UniProt: 85-123Exon 1.6  PDB: B:124-149  Exon 1.7  PDB: B:150-190 UniProt: 150-190Exon 1.8  PDB: B:191-227             -------------------------------------------------------Exon 1.10  PDB: B:283-310   ------------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:227-282 UniProt: 227-282               ---------------------------Exon 1.11      Transcript 1 (2)
                 2fvl B   1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain C from PDB  Type:PROTEIN  Length:323
 aligned with AK1C4_HUMAN | P17516 from UniProtKB/Swiss-Prot  Length:323

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
          AK1C4_HUMAN     1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
               SCOP domains d2fvlc_ C: automated matches                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 2fvlC00 C:1-323 NADP-dependent oxidoreductase                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eee.....eee.eeee.........hhhhhhhhhhhhhh..eee......hhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh...eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh..hhhhhhhhhh.........hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------E---------C------------------------Y-------------------------------------------------------------------------------R------------------------------------------------------------V------------ SAPs(SNPs)
                    PROSITE --------------------------------------------ALDOKETO_REDUCTASE----------------------------------------------------------------------------------------ALDOKETO_REDUCTASE---------------------------------------------------------------------------------------------------ALDOKETO_REDUCTA---------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2c  PDB: C:1-28      Exon 1.3  PDB: C:29-84 UniProt: 29-84                   Exon 1.4  PDB: C:85-123 UniProt: 85-123Exon 1.6  PDB: C:124-149  Exon 1.7  PDB: C:150-190 UniProt: 150-190Exon 1.8  PDB: C:191-227             -------------------------------------------------------Exon 1.10  PDB: C:283-310   ------------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:227-282 UniProt: 227-282               ---------------------------Exon 1.11      Transcript 1 (2)
                 2fvl C   1 MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPDYPFSDEY 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: TIM beta/alpha-barrel (3956)

Superfamily: NAD(P)-linked oxidoreductase (286)

Family: Aldo-keto reductases (NADP) (251)

Protein domain: automated matches (62)

Human (Homo sapiens) [TaxId: 9606] (48)

1a	d2fvla_	A:
1b	d2fvlb_	B:
1c	d2fvlc_	C:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Barrel (2994)

Topology: TIM Barrel (2806)

Homologous Superfamily: NADP-dependent oxidoreductase (181)

Human (Homo sapiens) (116)

1a	2fvlA00	A:1-323
1b	2fvlB00	B:1-323
1c	2fvlC00	C:1-323

(no "Pfam Domain" information available for 2FVL)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (AK1C4_HUMAN | P17516)

molecular function
	GO:0004033	aldo-keto reductase (NADP) activity	Catalysis of the reaction: an alcohol + NADP+ = an aldehyde or a ketone + NADPH + H+.
	GO:0047023	androsterone dehydrogenase activity	Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione.
	GO:0015125	bile acid transmembrane transporter activity	Enables the transfer of bile acid from one side of the membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.
	GO:0047743	chlordecone reductase activity	Catalysis of the reaction: chlordecone alcohol + NADP(+) = chlordecone + H(+) + NADPH.
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.
	GO:0001758	retinal dehydrogenase activity	Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal.
biological process
	GO:0008209	androgen metabolic process	The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.
	GO:0015721	bile acid and bile salt transport	The directed movement of bile acid and bile salts into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006699	bile acid biosynthetic process	The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile.
	GO:0071395	cellular response to jasmonic acid stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
	GO:0044597	daunorubicin metabolic process	The chemical reactions and pathways involving daunorubicin, a chemotherapeutic of the anthracycline family that is given as a treatment for some types of cancer.
	GO:0044598	doxorubicin metabolic process	The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0001523	retinoid metabolic process	The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
	GO:0008202	steroid metabolic process	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

Asymmetric Unit
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	Cis Peptide Bonds
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	2fvl
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	AK1C4_HUMAN \| P17516
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	1.1.1.225
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	1.1.1.50
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	AK1C4_HUMAN \| P17516
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(no "Entries Sharing at Least One Protein Chain" available for 2FVL)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 3)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (5, 15)

PROSITE Motifs (3, 9)

Exons (9, 27)

Sequences/Alignments

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SCOP Domains (1, 3)

CATH Domains (1, 3)

Pfam Domains (0, 0)

Gene Ontology (20, 20)

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Entries Sharing at Least One Protein Chain (UniProt ID)

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