Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym.Unit - manually
(-)Asymmetric Unit
(-)Biological Unit 1
(-)Biological Unit 2
collapse expand < >
Image Asym.Unit - manually
Asym.Unit - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF EXOPOLYPHOSPHATASE (PPX) FROM E. COLI O157:H7
 
Authors :  E. S. Rangarajan, M. Cygler, A. Matte, Montreal-Kingston Bacterial Structural Genomics Initiative (Bsgi)
Date :  06 Jan 06  (Deposition) - 06 Jun 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Exopolyphosphatase, Ppx/Gppa, Metaphosphatase, Structural Genomics, Bacterial Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, Bsgi, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. S. Rangarajan, G. Nadeau, Y. Li, J. Wagner, M. N. Hung, J. D. Schrag, M. Cygler, A. Matte
The Structure Of The Exopolyphosphatase (Ppx) From Escherichia Coli O157:H7 Suggests A Binding Mode For Long Polyphosphate Chains.
J. Mol. Biol. V. 359 1249 2006
PubMed-ID: 16678853  |  Reference-DOI: 10.1016/J.JMB.2006.04.031

(-) Compounds

Molecule 1 - EXOPOLYPHOSPHATASE
    ChainsA, B, C, D
    EC Number3.6.1.11
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GenePPX
    Organism ScientificESCHERICHIA COLI
    Organism Taxid83334
    SynonymEXOPOLYPASE, METAPHOSPHATASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 64)

Asymmetric Unit (1, 64)
No.NameCountTypeFull Name
1MSE64Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 32)
No.NameCountTypeFull Name
1MSE32Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 32)
No.NameCountTypeFull Name
1MSE32Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2FLO)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2FLO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2FLO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FLO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FLO)

(-) Exons   (0, 0)

(no "Exon" information available for 2FLO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:496
 aligned with PPX_ECO57 | P0AFL8 from UniProtKB/Swiss-Prot  Length:513

    Alignment length:496
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500      
            PPX_ECO57    11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
               SCOP domains d2floa2 A:11-135 Exopolyphosphatase Ppx                                                                                      d2floa3 A:136-312 Exopolyphosphatase Ppx                                                                                                                                         d2floa1 A:313-506 Exopolyphosphatase Ppx C-terminal domain                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee...eeeeeeeeee..eeeeeeeeeee..hhhhh......hhhhhhhhhhhhhhhhhhh...hhh.eeeeehhhhhhh.hhhhhhhhhh......eee.hhhhhhhhhhhhhhhh......eeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhh..eeeeehhhhhhhhhhhhh........hhhhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eee...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhh.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..eeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2flo A  11 QEFAAVDLGSNSFHmVIARVVDGAmQIIGRLKQRVHLADGLGPDNmLSEEAmTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFmGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRmGCVSFAQLYFPGGVINKENFQRARmAAAQKLETLTWQFRIQGWNVAmGASGTIKAAHEVLmEmGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEmEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTmQmYEQWREQQPKLAHPQLEALLRWAAmLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLmmATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
                                    20    |   30    |   40        50     |  60 |      70        80        90       100       110       120      |130       140       150       160      |170       180       190 |     200       210   |   220       230       240       250       260       270       280       290       300    |  310       320       330       340| |    350       360       370       380       390       400   ||  410       420       430       440       450       460       470       480       490       500      
                                         25-MSE    35-MSE               56-MSE |                                                              127-MSE                                 167-MSE                  192-MSE               214-MSE       228-MSE                                                                      305-MSE                             341-MSE                    368-MSE                             404-MSE                                                                                                  
                                                                              62-MSE                                                                                                                                                                 230-MSE                                                                                                          343-MSE                                                       405-MSE                                                                                                 

Chain B from PDB  Type:PROTEIN  Length:495
 aligned with PPX_ECO57 | P0AFL8 from UniProtKB/Swiss-Prot  Length:513

    Alignment length:495
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501     
            PPX_ECO57    12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
               SCOP domains d2flob2 B:12-135 Exopolyphosphatase Ppx                                                                                     d2flob3 B:136-312 Exopolyphosphatase Ppx                                                                                                                                         d2flob1 B:313-506 Exopolyphosphatase Ppx C-terminal domain                                                                                                                                         SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeeeeee..eeeeeeeeee...hhhhh......hhhhhhhhhhhhhhhhhhh...hhh.eeeeehhhhhhh.hhhhhhhhhh......eee.hhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhh..eeeeehhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh....eee..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhh.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..eeeeee.......hhhhhhhhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2flo B  12 EFAAVDLGSNSFHmVIARVVDGAmQIIGRLKQRVHLADGLGPDNmLSEEAmTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFmGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRmGCVSFAQLYFPGGVINKENFQRARmAAAQKLETLTWQFRIQGWNVAmGASGTIKAAHEVLmEmGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEmEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTmQmYEQWREQQPKLAHPQLEALLRWAAmLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLmmATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
                                    21   |    31   |    41        51    |   61|       71        81        91       101       111       121     | 131       141       151       161     | 171       181       191|      201       211  |    221      |231       241       251       261       271       281       291       301   |   311       321       331       341 |     351       361      |371       381       391       401  ||   411       421       431       441       451       461       471       481       491       501     
                                        25-MSE    35-MSE               56-MSE |                                                              127-MSE                                 167-MSE                  192-MSE               214-MSE       228-MSE                                                                      305-MSE                             341-MSE                    368-MSE                             404-MSE                                                                                                  
                                                                             62-MSE                                                                                                                                                                 230-MSE                                                                                                          343-MSE                                                       405-MSE                                                                                                 

Chain C from PDB  Type:PROTEIN  Length:496
 aligned with PPX_ECO57 | P0AFL8 from UniProtKB/Swiss-Prot  Length:513

    Alignment length:496
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500      
            PPX_ECO57    11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
               SCOP domains d2floc2 C:11-135 Exopolyphosphatase Ppx                                                                                      d2floc3 C:136-312 Exopolyphosphatase Ppx                                                                                                                                         d2floc1 C:313-506 Exopolyphosphatase Ppx C-terminal domain                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeeeeee..eeeeeeeeee..hhhhhh......hhhhhhhhhhhhhhhhhhh...hhh.eeeeehhhhhhh.hhhhhhhhhh......eee.hhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhh..eeeeehhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhh...........hhhhhhhhhhhhhhhhh....ee...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhh.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..eeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2flo C  11 QEFAAVDLGSNSFHmVIARVVDGAmQIIGRLKQRVHLADGLGPDNmLSEEAmTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFmGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRmGCVSFAQLYFPGGVINKENFQRARmAAAQKLETLTWQFRIQGWNVAmGASGTIKAAHEVLmEmGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEmEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTmQmYEQWREQQPKLAHPQLEALLRWAAmLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLmmATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
                                    20    |   30    |   40        50     |  60 |      70        80        90       100       110       120      |130       140       150       160      |170       180       190 |     200       210   |   220       230       240       250       260       270       280       290       300    |  310       320       330       340| |    350       360       370       380       390       400   ||  410       420       430       440       450       460       470       480       490       500      
                                         25-MSE    35-MSE               56-MSE |                                                              127-MSE                                 167-MSE                  192-MSE               214-MSE       228-MSE                                                                      305-MSE                             341-MSE                    368-MSE                             404-MSE                                                                                                  
                                                                              62-MSE                                                                                                                                                                 230-MSE                                                                                                          343-MSE                                                       405-MSE                                                                                                 

Chain D from PDB  Type:PROTEIN  Length:496
 aligned with PPX_ECO57 | P0AFL8 from UniProtKB/Swiss-Prot  Length:513

    Alignment length:496
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500      
            PPX_ECO57    11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
               SCOP domains d2flod2 D:11-135 Exopolyphosphatase Ppx                                                                                      d2flod3 D:136-312 Exopolyphosphatase Ppx                                                                                                                                         d2flod1 D:313-506 Exopolyphosphatase Ppx C-terminal domain                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....eeeeeeeee..eeeeeeeeee...hhhhh......hhhhhhhhhhhhhhhhhhh...hhh.eeeeehhhhhhh.hhhhhhhhhh......eee.hhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhh..eeeeehhhhhhhhhhhhh........hhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh....ee...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhhhhhh.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..eeeeee..hhhhhhhhhhhhhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2flo D  11 QEFAAVDLGSNSFHmVIARVVDGAmQIIGRLKQRVHLADGLGPDNmLSEEAmTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFmGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRmGCVSFAQLYFPGGVINKENFQRARmAAAQKLETLTWQFRIQGWNVAmGASGTIKAAHEVLmEmGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEmEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTmQmYEQWREQQPKLAHPQLEALLRWAAmLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLmmATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEE 506
                                    20    |   30    |   40        50     |  60 |      70        80        90       100       110       120      |130       140       150       160      |170       180       190 |     200       210   |   220       230       240       250       260       270       280       290       300    |  310       320       330       340| |    350       360       370       380       390       400   ||  410       420       430       440       450       460       470       480       490       500      
                                         25-MSE    35-MSE               56-MSE |                                                              127-MSE                                 167-MSE                  192-MSE               214-MSE       228-MSE                                                                      305-MSE                             341-MSE                    368-MSE                             404-MSE                                                                                                  
                                                                              62-MSE                                                                                                                                                                 230-MSE                                                                                                          343-MSE                                                       405-MSE                                                                                                 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2FLO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2FLO)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (PPX_ECO57 | P0AFL8)
molecular function
    GO:0004309    exopolyphosphatase activity    Catalysis of the reaction: polyphosphate(n) + H2O = polyphosphate(n-1) + phosphate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0006793    phosphorus metabolic process    The chemical reactions and pathways involving the nonmetallic element phosphorus or compounds that contain phosphorus, usually in the form of a phosphate group (PO4).
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    MSE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
(no "Sites" information available for 2flo)
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2flo)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2flo
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  PPX_ECO57 | P0AFL8
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.6.1.11
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  PPX_ECO57 | P0AFL8
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PPX_ECO57 | P0AFL81u6z

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2FLO)