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Biol. Unit 1
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Asym.Unit (341 KB)
Biol.Unit 1 (168 KB)
Biol.Unit 2 (169 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF EXOPOLYPHOSPHATASE (PPX) FROM E. COLI O157:H7
Authors
:
E. S. Rangarajan, M. Cygler, A. Matte, Montreal-Kingston Bacterial Structural Genomics Initiative (Bsgi)
Date
:
06 Jan 06 (Deposition) - 06 Jun 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Exopolyphosphatase, Ppx/Gppa, Metaphosphatase, Structural Genomics, Bacterial Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, Bsgi, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
E. S. Rangarajan, G. Nadeau, Y. Li, J. Wagner, M. N. Hung, J. D. Schrag, M. Cygler, A. Matte
The Structure Of The Exopolyphosphatase (Ppx) From Escherichia Coli O157:H7 Suggests A Binding Mode For Long Polyphosphate Chains.
J. Mol. Biol. V. 359 1249 2006
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Hetero Components
(1, 32)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1ar: SELENOMETHIONINE (MSEar)
1as: SELENOMETHIONINE (MSEas)
1at: SELENOMETHIONINE (MSEat)
1au: SELENOMETHIONINE (MSEau)
1av: SELENOMETHIONINE (MSEav)
1aw: SELENOMETHIONINE (MSEaw)
1ax: SELENOMETHIONINE (MSEax)
1ay: SELENOMETHIONINE (MSEay)
1az: SELENOMETHIONINE (MSEaz)
1b: SELENOMETHIONINE (MSEb)
1ba: SELENOMETHIONINE (MSEba)
1bb: SELENOMETHIONINE (MSEbb)
1bc: SELENOMETHIONINE (MSEbc)
1bd: SELENOMETHIONINE (MSEbd)
1be: SELENOMETHIONINE (MSEbe)
1bf: SELENOMETHIONINE (MSEbf)
1bg: SELENOMETHIONINE (MSEbg)
1bh: SELENOMETHIONINE (MSEbh)
1bi: SELENOMETHIONINE (MSEbi)
1bj: SELENOMETHIONINE (MSEbj)
1bk: SELENOMETHIONINE (MSEbk)
1bl: SELENOMETHIONINE (MSEbl)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
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No.
Name
Count
Type
Full Name
1
MSE
32
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d2floa1 (A:313-506)
1b: SCOP_d2flob1 (B:313-506)
1c: SCOP_d2floc1 (C:313-506)
1d: SCOP_d2flod1 (D:313-506)
2a: SCOP_d2floa2 (A:11-135)
2b: SCOP_d2flod2 (D:11-135)
2c: SCOP_d2flod3 (D:136-312)
2d: SCOP_d2floa3 (A:136-312)
2e: SCOP_d2flob2 (B:12-135)
2f: SCOP_d2flob3 (B:136-312)
2g: SCOP_d2floc2 (C:11-135)
2h: SCOP_d2floc3 (C:136-312)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
HD-domain/PDEase-like
(204)
Superfamily
:
HD-domain/PDEase-like
(204)
Family
:
Ppx associated domain
(2)
Protein domain
:
Exopolyphosphatase Ppx C-terminal domain
(2)
Escherichia coli [TaxId: 562]
(2)
1a
d2floa1
A:313-506
1b
d2flob1
B:313-506
1c
d2floc1
C:313-506
1d
d2flod1
D:313-506
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
Ppx/GppA phosphatase
(5)
Protein domain
:
Exopolyphosphatase Ppx
(4)
Escherichia coli [TaxId: 562]
(2)
2a
d2floa2
A:11-135
2b
d2flod2
D:11-135
2c
d2flod3
D:136-312
2d
d2floa3
A:136-312
2e
d2flob2
B:12-135
2f
d2flob3
B:136-312
2g
d2floc2
C:11-135
2h
d2floc3
C:136-312
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Asymmetric Unit 1
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Asym.Unit (341 KB)
Header - Asym.Unit
Biol.Unit 1 (168 KB)
Header - Biol.Unit 1
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