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(-) Description

Title :  STRUCTURE OF THE G6 FAB, A PHAGE DERIVED VEGF BINDING FAB
 
Authors :  C. Wiesmann
Date :  02 Jan 06  (Deposition) - 07 Feb 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1:  H,L  (1x)
Biol. Unit 2:  A,B  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  E,F  (1x)
Biol. Unit 5:  G,I  (1x)
Biol. Unit 6:  J,K  (1x)
Biol. Unit 7:  M,N  (1x)
Biol. Unit 8:  O,P  (1x)
Biol. Unit 9:  Q,R  (1x)
Biol. Unit 10:  S,T  (1x)
Biol. Unit 11:  U,V  (1x)
Biol. Unit 12:  W,X  (1x)
Keywords :  Antibody, Fab, Dodecamer, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Fuh, P. Wu, W. C. Liang, M. Ultsch, C. V. Lee, B. Moffat, C. Wiesmann
Structure-Function Studies Of Two Synthetic Anti-Vascular Endothelial Growth Factor Fabs And Comparison With The Avastin Fab.
J. Biol. Chem. V. 281 6625 2006
PubMed-ID: 16373345  |  Reference-DOI: 10.1074/JBC.M507783200

(-) Compounds

Molecule 1 - LIGHT CHAIN OF A VEGF BINDING ANTIBODY
    Chains: L, A, C, E, G, J, M, O, Q, S, U, W
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PW0276
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: THIS IS A PHAGE DERIVED ANTIBODY
 
Molecule 2 - HEAVY CHAIN OF A VEGF BINDING ANTIBODY
    Chains: H, B, D, F, I, K, N, P, R, T, V, X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PW0276
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: THIS IS A PHAGE DERIVED ANTIBODY

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric Unit : ABCDEFGHIJKLMNOPQRSTUVWX
Biological Unit 1 (1x):        H   L            
Biological Unit 2 (1x): AB                      
Biological Unit 3 (1x):   CD                    
Biological Unit 4 (1x):     EF                  
Biological Unit 5 (1x):       G I               
Biological Unit 6 (1x):          JK             
Biological Unit 7 (1x):             MN          
Biological Unit 8 (1x):               OP        
Biological Unit 9 (1x):                 QR      
Biological Unit 10 (1x):                   ST    
Biological Unit 11 (1x):                     UV  
Biological Unit 12 (1x):                       WX

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2FJF)

(-) Sites  (0, 0)

(no "Site" information available for 2FJF)

(-) SS Bonds  (48, 48)

Asymmetric Unit
No.Residues
1A:23 -A:88
2A:134 -A:194
3B:22 -B:96
4B:147 -B:203
5C:23 -C:88
6C:134 -C:194
7D:22 -D:96
8D:147 -D:203
9E:23 -E:88
10E:134 -E:194
11F:22 -F:96
12F:147 -F:203
13G:23 -G:88
14G:134 -G:194
15H:22 -H:96
16H:147 -H:203
17I:22 -I:96
18I:147 -I:203
19J:23 -J:88
20J:134 -J:194
21K:22 -K:96
22K:147 -K:203
23L:23 -L:88
24L:134 -L:194
25M:23 -M:88
26M:134 -M:194
27N:22 -N:96
28N:147 -N:203
29O:23 -O:88
30O:134 -O:194
31P:22 -P:96
32P:147 -P:203
33Q:23 -Q:88
34Q:134 -Q:194
35R:22 -R:96
36R:147 -R:203
37S:23 -S:88
38S:134 -S:194
39T:22 -T:96
40T:147 -T:203
41U:23 -U:88
42U:134 -U:194
43V:22 -V:96
44V:147 -V:203
45W:23 -W:88
46W:134 -W:194
47X:22 -X:96
48X:147 -X:203

(-) Cis Peptide Bonds  (72, 72)

Asymmetric Unit
No.Residues
1Ser L:7 -Pro L:8
2Thr L:94 -Pro L:95
3Tyr L:140 -Pro L:141
4Leu H:103 -Pro H:104
5Phe H:153 -Pro H:154
6Glu H:155 -Pro H:156
7Ser A:7 -Pro A:8
8Thr A:94 -Pro A:95
9Tyr A:140 -Pro A:141
10Leu B:103 -Pro B:104
11Phe B:153 -Pro B:154
12Glu B:155 -Pro B:156
13Ser C:7 -Pro C:8
14Thr C:94 -Pro C:95
15Tyr C:140 -Pro C:141
16Leu D:103 -Pro D:104
17Phe D:153 -Pro D:154
18Glu D:155 -Pro D:156
19Ser E:7 -Pro E:8
20Thr E:94 -Pro E:95
21Tyr E:140 -Pro E:141
22Leu F:103 -Pro F:104
23Phe F:153 -Pro F:154
24Glu F:155 -Pro F:156
25Ser G:7 -Pro G:8
26Thr G:94 -Pro G:95
27Tyr G:140 -Pro G:141
28Leu I:103 -Pro I:104
29Phe I:153 -Pro I:154
30Glu I:155 -Pro I:156
31Ser J:7 -Pro J:8
32Thr J:94 -Pro J:95
33Tyr J:140 -Pro J:141
34Leu K:103 -Pro K:104
35Phe K:153 -Pro K:154
36Glu K:155 -Pro K:156
37Ser M:7 -Pro M:8
38Thr M:94 -Pro M:95
39Tyr M:140 -Pro M:141
40Leu N:103 -Pro N:104
41Phe N:153 -Pro N:154
42Glu N:155 -Pro N:156
43Ser O:7 -Pro O:8
44Thr O:94 -Pro O:95
45Tyr O:140 -Pro O:141
46Leu P:103 -Pro P:104
47Phe P:153 -Pro P:154
48Glu P:155 -Pro P:156
49Ser Q:7 -Pro Q:8
50Thr Q:94 -Pro Q:95
51Tyr Q:140 -Pro Q:141
52Leu R:103 -Pro R:104
53Phe R:153 -Pro R:154
54Glu R:155 -Pro R:156
55Ser S:7 -Pro S:8
56Thr S:94 -Pro S:95
57Tyr S:140 -Pro S:141
58Leu T:103 -Pro T:104
59Phe T:153 -Pro T:154
60Glu T:155 -Pro T:156
61Ser U:7 -Pro U:8
62Thr U:94 -Pro U:95
63Tyr U:140 -Pro U:141
64Leu V:103 -Pro V:104
65Phe V:153 -Pro V:154
66Glu V:155 -Pro V:156
67Ser W:7 -Pro W:8
68Thr W:94 -Pro W:95
69Tyr W:140 -Pro W:141
70Leu X:103 -Pro X:104
71Phe X:153 -Pro X:154
72Glu X:155 -Pro X:156

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2FJF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2FJF)

(-) Exons   (0, 0)

(no "Exon" information available for 2FJF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfa1 A:1-107 automated matches                                                                          d2fjfa2 A:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfA01 A:1-108 Immunoglobulins                                                                             2fjfA02 A:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee........eeeeeee......ee...eeeeee......eeeee..hhhhhhhheeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf A   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain B from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfb1 B:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfb2 B:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfB01 B:1-120 Immunoglobulins                                                                                         2fjfB02 B:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf B   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain C from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfc1 C:1-107 automated matches                                                                          d2fjfc2 C:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfC01 C:1-108 Immunoglobulins                                                                             2fjfC02 C:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf C   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain D from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfd1 D:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfd2 D:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfD01 D:1-120 Immunoglobulins                                                                                         2fjfD02 D:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf D   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain E from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfe1 E:1-107 automated matches                                                                          d2fjfe2 E:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfE01 E:1-108 Immunoglobulins                                                                             2fjfE02 E:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf E   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain F from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjff1 F:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjff2 F:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfF01 F:1-120 Immunoglobulins                                                                                         2fjfF02 F:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeee....eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee........eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf F   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain G from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfg1 G:1-107 automated matches                                                                          d2fjfg2 G:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfG01 G:1-108 Immunoglobulins                                                                             2fjfG02 G:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf G   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain H from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfh1 H:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfh2 H:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfH01 H:1-120 Immunoglobulins                                                                                         2fjfH02 H:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee........eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf H   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain I from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfi1 I:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfi2 I:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfI01 I:1-120 Immunoglobulins                                                                                         2fjfI02 I:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeee....eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf I   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain J from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfj1 J:1-107 automated matches                                                                          d2fjfj2 J:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfJ01 J:1-108 Immunoglobulins                                                                             2fjfJ02 J:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf J   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain K from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfk1 K:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfk2 K:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfK01 K:1-120 Immunoglobulins                                                                                         2fjfK02 K:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf K   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain L from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfl1 L:1-107 automated matches                                                                          d2fjfl2 L:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfL01 L:1-108 Immunoglobulins                                                                             2fjfL02 L:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee........eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf L   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain M from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfm1 M:1-107 automated matches                                                                          d2fjfm2 M:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfM01 M:1-108 Immunoglobulins                                                                             2fjfM02 M:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhhh..eeeeeeeee.....eeeeee........eeeee.........eeeeeeee.hhhhhh...eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf M   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain N from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfn1 N:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfn2 N:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfN01 N:1-120 Immunoglobulins                                                                                         2fjfN02 N:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh.....ee...ee.....eeeeeeeeee........eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf N   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain O from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfo1 O:1-107 automated matches                                                                          d2fjfo2 O:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfO01 O:1-108 Immunoglobulins                                                                             2fjfO02 O:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf O   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain P from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfp1 P:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfp2 P:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfP01 P:1-120 Immunoglobulins                                                                                         2fjfP02 P:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee.........ee...eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh.....eeeeeehhhheeeeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf P   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain Q from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfq1 Q:1-107 automated matches                                                                          d2fjfq2 Q:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfQ01 Q:1-108 Immunoglobulins                                                                             2fjfQ02 Q:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhhhheeeeeeeeeee....eeeeeee..eee...eeeee.........eeeeeeeeeehhhhh....eeeeeee......ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf Q   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain R from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfr1 R:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfr2 R:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfR01 R:1-120 Immunoglobulins                                                                                         2fjfR02 R:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee........eeeeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf R   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain S from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfs1 S:1-107 automated matches                                                                          d2fjfs2 S:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfS01 S:1-108 Immunoglobulins                                                                             2fjfS02 S:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf S   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain T from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjft1 T:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjft2 T:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfT01 T:1-120 Immunoglobulins                                                                                         2fjfT02 T:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee.........ee...eeeee........eeeee.....eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf T   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain U from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfu1 U:1-107 automated matches                                                                          d2fjfu2 U:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfU01 U:1-108 Immunoglobulins                                                                             2fjfU02 U:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee......eee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf U   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain V from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfv1 V:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfv2 V:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfV01 V:1-120 Immunoglobulins                                                                                         2fjfV02 V:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeee....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf V   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141                                                                                  


Chain W from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains d2fjfw1 W:1-107 automated matches                                                                          d2fjfw2 W:108-211 automated matches                                                                      SCOP domains
               CATH domains 2fjfW01 W:1-108 Immunoglobulins                                                                             2fjfW02 W:109-211 Immunoglobulins                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeeee....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhhhheeeeeeeeeee....eeeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeeee......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf W   1 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain X from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains d2fjfx1 X:1-120 Immunoglobulin heavy chain variable domain, VH                                                          d2fjfx2 X:121-223 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma                    SCOP domains
               CATH domains 2fjfX01 X:1-120 Immunoglobulins                                                                                         2fjfX02 X:121-223 Immunoglobulins                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee......eeeeee.hhhh.eee.......eeeeeehhh.eeeeee...hhhhheeeeeeee..............eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fjf X   1 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC 223
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165       175       185       195       205       215        
                                                                                                                                                                135|                                                                                  
                                                                                                                                                                 141
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 48)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Fold: Immunoglobulin-like beta-sandwich (7299)
(-)
Superfamily: Immunoglobulin (5995)
(-)
Family: automated matches (864)
(-)
Protein domain: automated matches (864)
(-)
Human (Homo sapiens) [TaxId: 9606] (448)
1ad2fjfa1A:1-107
1bd2fjfc1C:1-107
1cd2fjfe1E:1-107
1dd2fjfg1G:1-107
1ed2fjfj1J:1-107
1fd2fjfl1L:1-107
1gd2fjfm1M:1-107
1hd2fjfo1O:1-107
1id2fjfq1Q:1-107
1jd2fjfs1S:1-107
1kd2fjfu1U:1-107
1ld2fjfw1W:1-107
(-)
Family: C1 set domains (antibody constant domain-like) (3013)
(-)
Protein domain: automated matches (652)
(-)
Human (Homo sapiens) [TaxId: 9606] (334)
2ad2fjfa2A:108-211
2bd2fjfc2C:108-211
2cd2fjfe2E:108-211
2dd2fjfg2G:108-211
2ed2fjfj2J:108-211
2fd2fjfl2L:108-211
2gd2fjfm2M:108-211
2hd2fjfo2O:108-211
2id2fjfq2Q:108-211
2jd2fjfs2S:108-211
2kd2fjfu2U:108-211
2ld2fjfw2W:108-211
(-)
Protein domain: Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma (608)
(-)
Human (Homo sapiens) [TaxId: 9606] (179)
3ad2fjfb2B:121-223
3bd2fjfd2D:121-223
3cd2fjff2F:121-223
3dd2fjfh2H:121-223
3ed2fjfi2I:121-223
3fd2fjfk2K:121-223
3gd2fjfn2N:121-223
3hd2fjfp2P:121-223
3id2fjfr2R:121-223
3jd2fjft2T:121-223
3kd2fjfv2V:121-223
3ld2fjfx2X:121-223
(-)
Family: V set domains (antibody variable domain-like) (1919)
(-)
Protein domain: Immunoglobulin heavy chain variable domain, VH (658)
(-)
Engineered (including hybrid species) (68)
4ad2fjfb1B:1-120
4bd2fjfd1D:1-120
4cd2fjff1F:1-120
4dd2fjfh1H:1-120
4ed2fjfi1I:1-120
4fd2fjfk1K:1-120
4gd2fjfn1N:1-120
4hd2fjfp1P:1-120
4id2fjfr1R:1-120
4jd2fjft1T:1-120
4kd2fjfv1V:1-120
4ld2fjfx1X:1-120

(-) CATH Domains  (1, 48)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Immunoglobulin-like (3897)
(-)
Homologous Superfamily: Immunoglobulins (2282)
(-)
Human (Homo sapiens) (912)
1a2fjfA02A:109-211
1b2fjfB02B:121-223
1c2fjfD02D:121-223
1d2fjfF02F:121-223
1e2fjfH02H:121-223
1f2fjfI02I:121-223
1g2fjfK02K:121-223
1h2fjfN02N:121-223
1i2fjfP02P:121-223
1j2fjfR02R:121-223
1k2fjfT02T:121-223
1l2fjfV02V:121-223
1m2fjfX02X:121-223
1n2fjfB01B:1-120
1o2fjfD01D:1-120
1p2fjfF01F:1-120
1q2fjfH01H:1-120
1r2fjfI01I:1-120
1s2fjfK01K:1-120
1t2fjfN01N:1-120
1u2fjfP01P:1-120
1v2fjfR01R:1-120
1w2fjfT01T:1-120
1x2fjfV01V:1-120
1y2fjfX01X:1-120
1z2fjfC02C:109-211
1aa2fjfE02E:109-211
1ab2fjfG02G:109-211
1ac2fjfJ02J:109-211
1ad2fjfL02L:109-211
1ae2fjfM02M:109-211
1af2fjfO02O:109-211
1ag2fjfQ02Q:109-211
1ah2fjfS02S:109-211
1ai2fjfU02U:109-211
1aj2fjfW02W:109-211
1ak2fjfA01A:1-108
1al2fjfC01C:1-108
1am2fjfE01E:1-108
1an2fjfG01G:1-108
1ao2fjfJ01J:1-108
1ap2fjfL01L:1-108
1aq2fjfM01M:1-108
1ar2fjfO01O:1-108
1as2fjfQ01Q:1-108
1at2fjfS01S:1-108
1au2fjfU01U:1-108
1av2fjfW01W:1-108

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  2fjf
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1flt COMPLEX OF VEGF WITH SECOND DOMAIN OF VEGFR1
2fjg
2fjh