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(-) Description

Title :  CRYSTAL STRUCTURE OF CONSERVED PROTEIN OF UNKNOWN FUNCTION TM0937- A POTENTIAL TRANSCRIPTIONAL FACTOR
 
Authors :  Y. Liu, E. Bochkareva, H. Zheng, X. Xu, B. Nocek, V. Lunin, A. Edward, E. F A. Joachimiak, A. Savchenko, Midwest Center For Structural Geno (Mcsg)
Date :  26 Oct 05  (Deposition) - 06 Dec 05  (Release) - 05 Oct 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Tm0937, Apc5794, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Liu, E. Bochkareva, H. Zheng, X. Xu, B. Nocek, V. Lunin, A. Edward, E. F. Pai, A. Savchenko
Crystal Structure Of Conserved Hypothetical Protein Tm0937
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN TM0937
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Strain: MSB8

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:67 , HOH A:2028BINDING SITE FOR RESIDUE CA A 2000

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ESH)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1His A:48 -Met A:49
2Ser A:74 -Pro A:75

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:114
 aligned with Q9X035_THEMA | Q9X035 from UniProtKB/TrEMBL  Length:118

    Alignment length:114
                                    13        23        33        43        53        63        73        83        93       103       113    
         Q9X035_THEMA     4 RGGRGFRGWWLASTILLLVAEKPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREILRSLEDMKRRIETLEERIKRVLQE 117
               SCOP domains d2esha1 A:4-117 Hypothetical protein TM0937                                                                        SCOP domains
               CATH domains 2eshA00 A:4-117 'winged helix' repressor DNA binding domain                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh............hhhhhhhhhhhh..eeeeee......eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 2esh A   4 RGGRGFRGWWLASTILLLVAEKPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREILRSLEDMKRRIETLEERIKRVLQE 117
                                    13        23        33        43        53        63        73        83        93       103       113
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2ESH)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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