Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF LIPOAMIDE DEHYDROGENASE FROM THERMUS THERMOPHILUS HB8 WITH PSBDB
 
Authors :  T. Nakai, N. Kamiya, Riken Structural Genomics/Proteomics Initia (Rsgi)
Date :  30 Mar 07  (Deposition) - 01 Apr 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  G,H,I  (1x)
Biol. Unit 4:  J,K,L  (1x)
Keywords :  Protein-Protein Complex, Oxidoreductase, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Nakai, N. Kamiya
Crystal Structure Of Lipoamide Dehydrogenase From Thermus Thermophilus Hb8
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PYRUVATE DEHYDROGENASE COMPLEX, DIHYDROLIPOAMIDE DEHYDROGENASE E3 COMPONENT
    Chains: A, B, D, E, G, H, J, K
    EC Number: 1.8.1.4
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11A
    Expression System Strain: BLR(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TTHA0233
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8
    Synonym: LIPOAMIDE DEHYDROGENASE
 
Molecule 2 - PYRUVATE DEHYDROGENASE COMPLEX, DIHYDROLIPOAMIDE ACETYLTRANSFERASE E2 COMPONENT
    Chains: C, F, I, L
    EC Number: 2.3.1.168
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11A
    Expression System Strain: BLR(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: PERIPHERAL SUBUNIT BINDING DOMAIN
    Gene: TTHA0232
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABC         
Biological Unit 2 (1x):    DEF      
Biological Unit 3 (1x):       GHI   
Biological Unit 4 (1x):          JKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1FAD8Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:15 , GLY A:16 , GLY A:18 , PRO A:19 , GLY A:20 , GLU A:39 , ALA A:40 , GLU A:42 , GLY A:45 , CYS A:47 , GLY A:51 , CYS A:52 , THR A:55 , LYS A:56 , GLY A:117 , PHE A:118 , ALA A:119 , ALA A:146 , THR A:147 , GLY A:148 , SER A:166 , ARG A:274 , LEU A:281 , GLY A:313 , ASP A:314 , LEU A:320 , LEU A:321 , ALA A:322 , HIS A:323 , ALA A:325 , TYR A:353 , HOH A:8484 , HOH A:8487 , HOH A:8491 , HOH A:8498 , HOH A:8507 , HOH A:8564 , HIS B:446BINDING SITE FOR RESIDUE FAD A 8482
2AC2SOFTWAREHIS A:446 , ILE B:15 , GLY B:16 , GLY B:18 , PRO B:19 , GLY B:20 , GLU B:39 , ALA B:40 , GLU B:42 , GLY B:45 , CYS B:47 , GLY B:51 , CYS B:52 , THR B:55 , LYS B:56 , GLY B:117 , PHE B:118 , ALA B:119 , ALA B:146 , THR B:147 , GLY B:148 , SER B:166 , ARG B:274 , LEU B:281 , GLY B:313 , ASP B:314 , LEU B:320 , LEU B:321 , ALA B:322 , HIS B:323 , TYR B:353 , HOH B:1503 , HOH B:1504 , HOH B:1512 , HOH B:1529 , HOH B:1530 , HOH B:1584BINDING SITE FOR RESIDUE FAD B 1482
3AC3SOFTWAREILE D:15 , GLY D:16 , GLY D:18 , PRO D:19 , GLY D:20 , GLU D:39 , ALA D:40 , GLU D:42 , GLY D:45 , CYS D:47 , GLY D:51 , CYS D:52 , THR D:55 , LYS D:56 , GLY D:117 , PHE D:118 , ALA D:119 , ALA D:146 , THR D:147 , GLY D:148 , SER D:166 , ARG D:274 , ARG D:277 , LEU D:281 , GLY D:313 , ASP D:314 , LEU D:320 , LEU D:321 , ALA D:322 , HIS D:323 , TYR D:353 , HOH D:2491 , HOH D:2493 , HOH D:2496 , HOH D:2503 , HOH D:2504 , HOH D:2575 , HIS E:446BINDING SITE FOR RESIDUE FAD D 2482
4AC4SOFTWAREHIS D:446 , ILE E:15 , GLY E:16 , GLY E:18 , PRO E:19 , GLY E:20 , GLU E:39 , ALA E:40 , GLU E:42 , GLY E:45 , CYS E:47 , GLY E:51 , CYS E:52 , THR E:55 , LYS E:56 , GLY E:117 , PHE E:118 , ALA E:119 , ALA E:146 , THR E:147 , GLY E:148 , SER E:166 , ARG E:274 , ARG E:277 , LEU E:281 , GLY E:313 , ASP E:314 , LEU E:320 , LEU E:321 , ALA E:322 , HIS E:323 , TYR E:353 , HOH E:3491 , HOH E:3503 , HOH E:3508 , HOH E:3514 , HOH E:3522 , HOH E:3585BINDING SITE FOR RESIDUE FAD E 3482
5AC5SOFTWAREILE G:15 , GLY G:16 , GLY G:18 , PRO G:19 , GLY G:20 , GLU G:39 , ALA G:40 , GLU G:42 , GLY G:45 , CYS G:47 , GLY G:51 , CYS G:52 , LYS G:56 , GLY G:117 , PHE G:118 , ALA G:119 , ALA G:146 , THR G:147 , GLY G:148 , SER G:166 , ARG G:274 , LEU G:281 , GLY G:313 , ASP G:314 , LEU G:320 , LEU G:321 , ALA G:322 , HIS G:323 , TYR G:353 , HOH G:4492 , HOH G:4502 , HOH G:4511 , HOH G:4572 , HOH G:4598 , HOH G:4607 , HIS H:446BINDING SITE FOR RESIDUE FAD G 4482
6AC6SOFTWAREHIS G:446 , ILE H:15 , GLY H:16 , GLY H:18 , PRO H:19 , GLY H:20 , GLU H:39 , ALA H:40 , GLU H:42 , GLY H:45 , CYS H:47 , GLY H:51 , CYS H:52 , THR H:55 , LYS H:56 , GLY H:117 , PHE H:118 , ALA H:119 , ALA H:146 , THR H:147 , GLY H:148 , SER H:166 , ARG H:274 , ARG H:277 , LEU H:281 , GLY H:313 , ASP H:314 , LEU H:320 , LEU H:321 , ALA H:322 , HIS H:323 , TYR H:353 , HOH H:5483 , HOH H:5485 , HOH H:5493 , HOH H:5501 , HOH H:5506 , HOH H:5555 , HOH H:5593BINDING SITE FOR RESIDUE FAD H 5482
7AC7SOFTWAREILE J:15 , GLY J:16 , GLY J:18 , PRO J:19 , GLY J:20 , GLY J:21 , GLU J:39 , ALA J:40 , GLU J:42 , GLY J:45 , CYS J:47 , GLY J:51 , CYS J:52 , THR J:55 , LYS J:56 , GLY J:117 , PHE J:118 , ALA J:119 , ALA J:146 , THR J:147 , GLY J:148 , SER J:166 , ARG J:274 , LEU J:281 , GLY J:313 , ASP J:314 , LEU J:320 , LEU J:321 , ALA J:322 , HIS J:323 , TYR J:353 , HOH J:6495 , HOH J:6496 , HOH J:6516 , HOH J:6524 , HOH J:6528 , HIS K:446BINDING SITE FOR RESIDUE FAD J 6482
8AC8SOFTWAREHIS J:446 , ILE K:15 , GLY K:16 , GLY K:18 , PRO K:19 , GLY K:20 , GLU K:39 , ALA K:40 , GLU K:42 , GLY K:45 , CYS K:47 , GLY K:51 , CYS K:52 , THR K:55 , LYS K:56 , PHE K:118 , ALA K:119 , ALA K:146 , THR K:147 , GLY K:148 , SER K:166 , ARG K:274 , ARG K:277 , LEU K:281 , GLY K:313 , ASP K:314 , LEU K:320 , LEU K:321 , ALA K:322 , HIS K:323 , TYR K:353 , HOH K:7487 , HOH K:7489 , HOH K:7523BINDING SITE FOR RESIDUE FAD K 7482

(-) SS Bonds  (8, 8)

Asymmetric Unit
No.Residues
1A:47 -A:52
2B:47 -B:52
3D:47 -D:52
4E:47 -E:52
5G:47 -G:52
6H:47 -H:52
7J:47 -J:52
8K:47 -K:52

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Pro A:318 -Pro A:319
2Ser A:355 -Pro A:356
3His A:446 -Pro A:447
4Pro B:318 -Pro B:319
5Ser B:355 -Pro B:356
6His B:446 -Pro B:447
7Pro D:318 -Pro D:319
8Ser D:355 -Pro D:356
9His D:446 -Pro D:447
10Pro E:318 -Pro E:319
11Ser E:355 -Pro E:356
12His E:446 -Pro E:447
13Pro G:318 -Pro G:319
14Ser G:355 -Pro G:356
15His G:446 -Pro G:447
16Pro H:318 -Pro H:319
17Ser H:355 -Pro H:356
18His H:446 -Pro H:447
19Pro J:318 -Pro J:319
20Ser J:355 -Pro J:356
21His J:446 -Pro J:447
22Pro K:318 -Pro K:319
23Ser K:355 -Pro K:356
24His K:446 -Pro K:447

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2EQ9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2EQ9)

(-) Exons   (0, 0)

(no "Exon" information available for 2EQ9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9A01 A:7-151,A:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9A02 A:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9A01 A:7-151,A:273-345  [code=3.50.50.60, no name defined]            2eq9A03 A:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee..eeeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhh......................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 A    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9B01 B:7-151,B:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9B02 B:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9B01 B:7-151,B:273-345  [code=3.50.50.60, no name defined]            2eq9B03 B:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee..eeeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee................................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 B    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:40
 aligned with Q5SLR1_THET8 | Q5SLR1 from UniProtKB/TrEMBL  Length:451

    Alignment length:40
                                   154       164       174       184
        Q5SLR1_THET8    145 VLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  184
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains 2eq9C00 C:129-168                        CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..hhhhh.........hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                2eq9 C  129 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  168
                                   138       148       158       168


Chain D from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9D01 D:7-151,D:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9D02 D:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9D01 D:7-151,D:273-345  [code=3.50.50.60, no name defined]            2eq9D03 D:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee..eeeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 D    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9E01 E:7-151,E:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9E02 E:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9E01 E:7-151,E:273-345  [code=3.50.50.60, no name defined]            2eq9E03 E:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee..eeeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 E    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:40
 aligned with Q5SLR1_THET8 | Q5SLR1 from UniProtKB/TrEMBL  Length:451

    Alignment length:40
                                   154       164       174       184
        Q5SLR1_THET8    145 VLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  184
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains 2eq9F00 F:129-168                        CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhh..hhhhh.......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                2eq9 F  129 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  168
                                   138       148       158       168


Chain G from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9G01 G:7-151,G:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9G02 G:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9G01 G:7-151,G:273-345  [code=3.50.50.60, no name defined]            2eq9G03 G:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...eeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 G    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain H from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9H01 H:7-151,H:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9H02 H:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9H01 H:7-151,H:273-345  [code=3.50.50.60, no name defined]            2eq9H03 H:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee..eee....eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeeee.........hhhhhhhhhhhhhhh..eeee.eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhh........hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 H    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain I from PDB  Type:PROTEIN  Length:40
 aligned with Q5SLR1_THET8 | Q5SLR1 from UniProtKB/TrEMBL  Length:451

    Alignment length:40
                                   154       164       174       184
        Q5SLR1_THET8    145 VLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  184
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains 2eq9I00 I:129-168                        CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhhhh..hhhhh.......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                2eq9 I  129 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  168
                                   138       148       158       168


Chain J from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9J01 J:7-151,J:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9J02 J:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9J01 J:7-151,J:273-345  [code=3.50.50.60, no name defined]            2eq9J03 J:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...eeee..eee....eeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhhh..eee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eeehhhhhh...hhhhhhhhhhhhhhh.............eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 J    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain K from PDB  Type:PROTEIN  Length:460
 aligned with Q5SLR0_THET8 | Q5SLR0 from UniProtKB/TrEMBL  Length:464

    Alignment length:460
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463
        Q5SLR0_THET8      4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  463
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2eq9K01 K:7-151,K:273-345  [code=3.50.50.60, no name defined]                                                                               2eq9K02 K:152-272  [code=3.50.50.60, no name defined]                                                                       2eq9K01 K:7-151,K:273-345  [code=3.50.50.60, no name defined]            2eq9K03 K:347-469  [code=3.30.390.30, no name defined]                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee...eeee..eeee..eeeeeeeeee...eee...........eehhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhh.eeeee..........hhhhhhhhhhhhhhh.eeee..eeeeeeeee..eeeeeeee......eeeee.eeee...eee.....hhhhhh.....................eeehhhhhh...hhhhhhhhhhhhhhhhh...........eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2eq9 K    7 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILN  469
                                    16        26        36        46        56        66        76 ||     87        97       107       117       127 ||    141       151       161       171   |   180       190       200       210       220       230       240       250      |258       268       278       288       298       308       318       328       338      |349       359       369       379       389       399       409       419       429       439       449       459       469
                                                                                                  78|                                              129|                                     174A                                                                               256A|                                                                                      345|                                                                                                                          
                                                                                                   80                                               134                                                                                                                         256B                                                                                       347                                                                                                                          


Chain L from PDB  Type:PROTEIN  Length:40
 aligned with Q5SLR1_THET8 | Q5SLR1 from UniProtKB/TrEMBL  Length:451

    Alignment length:40
                                   154       164       174       184
        Q5SLR1_THET8    145 VLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  184
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains 2eq9L00 L:129-168                        CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh...hhhhh.........hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                2eq9 L  129 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE  168
                                   138       148       158       168
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2EQ9)

(-) CATH Domains  (3, 28)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Architecture: 3-Layer(bba) Sandwich (528)
(-)
Topology: FAD/NAD(P)-binding domain (373)
(-)
Homologous Superfamily: [code=3.50.50.60, no name defined] (373)
(-)
Thermus thermophilus hb8. Organism_taxid: 300852. Strain: hb8. (4)
2a2eq9A01A:7-151,A:273-345
2b2eq9G01G:7-151,G:273-345
2c2eq9H01H:7-151,H:273-345
2d2eq9J01J:7-151,J:273-345
2e2eq9K01K:7-151,K:273-345
2f2eq9A02A:152-272
2g2eq9B02B:152-272
2h2eq9D02D:152-272
2i2eq9E02E:152-272
2j2eq9G02G:152-272
2k2eq9H02H:152-272
2l2eq9J02J:152-272
2m2eq9K02K:152-272
2n2eq9B01B:7-151,B:273-345
2o2eq9D01D:7-151,D:273-345
2p2eq9E01E:7-151,E:273-345
(-)
Class: Few Secondary Structures (1120)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2EQ9)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,D,E,G,H,J,K   (Q5SLR0_THET8 | Q5SLR0)
molecular function
    GO:0004148    dihydrolipoyl dehydrogenase activity    Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016668    oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0045454    cell redox homeostasis    Any process that maintains the redox environment of a cell or compartment within a cell.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Chain C,F,I,L   (Q5SLR1_THET8 | Q5SLR1)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    FAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    His A:446 - Pro A:447   [ RasMol ]  
    His B:446 - Pro B:447   [ RasMol ]  
    His D:446 - Pro D:447   [ RasMol ]  
    His E:446 - Pro E:447   [ RasMol ]  
    His G:446 - Pro G:447   [ RasMol ]  
    His H:446 - Pro H:447   [ RasMol ]  
    His J:446 - Pro J:447   [ RasMol ]  
    His K:446 - Pro K:447   [ RasMol ]  
    Pro A:318 - Pro A:319   [ RasMol ]  
    Pro B:318 - Pro B:319   [ RasMol ]  
    Pro D:318 - Pro D:319   [ RasMol ]  
    Pro E:318 - Pro E:319   [ RasMol ]  
    Pro G:318 - Pro G:319   [ RasMol ]  
    Pro H:318 - Pro H:319   [ RasMol ]  
    Pro J:318 - Pro J:319   [ RasMol ]  
    Pro K:318 - Pro K:319   [ RasMol ]  
    Ser A:355 - Pro A:356   [ RasMol ]  
    Ser B:355 - Pro B:356   [ RasMol ]  
    Ser D:355 - Pro D:356   [ RasMol ]  
    Ser E:355 - Pro E:356   [ RasMol ]  
    Ser G:355 - Pro G:356   [ RasMol ]  
    Ser H:355 - Pro H:356   [ RasMol ]  
    Ser J:355 - Pro J:356   [ RasMol ]  
    Ser K:355 - Pro K:356   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2eq9
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q5SLR0_THET8 | Q5SLR0
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
  Q5SLR1_THET8 | Q5SLR1
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  1.8.1.4
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
  2.3.1.168
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q5SLR0_THET8 | Q5SLR0
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q5SLR1_THET8 | Q5SLR1
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q5SLR0_THET8 | Q5SLR0: 2eq6 2eq8

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2EQ9)