2BTE | PR0252 - JenaLib

Biol.Unit 1 - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE

Authors :   S. Cusack, M. Tukalo, A. Yaremchuk, R. Fukunaga, S. Yokoyama

Date :   31 May 05 (Deposition) - 15 Sep 05 (Release) - 09 Mar 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A,B,D,E
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: D,E  (1x)

Keywords :   Ligase, Class I Aminoacyl-Trna Synthetase Editing (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Tukalo, A. Yaremchuk, R. Fukunaga, S. Yokoyama, S. Cusack
The Crystal Structure Of Leucyl-Trna Synthetase Complexed With Trna(Leu) In The Post-Transfer- Editing Conformation.
Nat. Struct. Mol. Biol. V. 12 923 2005
PubMed-ID: 16155583 | Reference-DOI: 10.1038/NSMB986

Molecule 1 - AMINOACYL-TRNA SYNTHETASE
	Chains	:	A, D
	EC Number	:	6.1.1.4
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274
	Synonym	:	LEUCYL-TRNA SYNTHETASE

Molecule 2 - TRNALEU TRANSCRIPT WITH ANTICODON CAG
	Chains	:	B, E
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274
	Synthetic	:	YES

		1	2	3	4
Asymmetric Unit	:	A	B	D	E
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			D	E

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 37)

No.	Name	Count	Type	Full Name
1	2AD	2	Ligand/Ion	2'-AMINO-2'-DEOXYADENOSINE
2	HG	2	Ligand/Ion	MERCURY (II) ION
3	LEU	2	Mod. Amino Acid	LEUCINE
4	NVA	2	Ligand/Ion	NORVALINE
5	SO4	25	Ligand/Ion	SULFATE ION
6	ZN	4	Ligand/Ion	ZINC ION

Biological Unit 1 (4, 15)

No.	Name	Count	Type	Full Name
1	2AD	1	Ligand/Ion	2'-AMINO-2'-DEOXYADENOSINE
2	HG	-1	Ligand/Ion	MERCURY (II) ION
3	LEU	1	Mod. Amino Acid	LEUCINE
4	NVA	1	Ligand/Ion	NORVALINE
5	SO4	12	Ligand/Ion	SULFATE ION
6	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (4, 16)

No.	Name	Count	Type	Full Name
1	2AD	1	Ligand/Ion	2'-AMINO-2'-DEOXYADENOSINE
2	HG	-1	Ligand/Ion	MERCURY (II) ION
3	LEU	1	Mod. Amino Acid	LEUCINE
4	NVA	1	Ligand/Ion	NORVALINE
5	SO4	13	Ligand/Ion	SULFATE ION
6	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (37, 37)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:439 , CYS A:442 , CYS A:484 , CYS A:487	BINDING SITE FOR RESIDUE ZN A1877
02	AC2	SOFTWARE	CYS A:159 , CYS A:162 , CYS A:176 , HIS A:179	BINDING SITE FOR RESIDUE ZN A1878
03	AC3	SOFTWARE	TYR A:102 , CYS A:128	BINDING SITE FOR RESIDUE HG A1879
04	AC4	SOFTWARE	GLY A:716 , LYS A:717 , ARG A:762	BINDING SITE FOR RESIDUE SO4 A1880
05	AC5	SOFTWARE	GLY A:707 , ARG A:769 , ARG A:773 , TRP A:795	BINDING SITE FOR RESIDUE SO4 A1881
06	AC6	SOFTWARE	HIS A:49 , HIS A:52 , SER A:639 , LYS A:640	BINDING SITE FOR RESIDUE SO4 A1882
07	AC7	SOFTWARE	ARG A:759	BINDING SITE FOR RESIDUE SO4 A1883
08	AC8	SOFTWARE	GLU A:188 , LYS A:288 , ARG A:289	BINDING SITE FOR RESIDUE SO4 A1884
09	AC9	SOFTWARE	TYR A:43 , ARG A:178	BINDING SITE FOR RESIDUE SO4 A1885
10	BC1	SOFTWARE	ARG A:295 , LYS A:302 , ARG A:346	BINDING SITE FOR RESIDUE SO4 A1886
11	BC2	SOFTWARE	GLU A:208 , LYS A:217 , ARG A:221	BINDING SITE FOR RESIDUE SO4 A1887
12	BC3	SOFTWARE	VAL A:564 , GLU A:565 , GLU A:566	BINDING SITE FOR RESIDUE SO4 A1888
13	BC4	SOFTWARE	GLU A:264 , LEU A:329 , PHE A:330 , GLY A:331 , ARG A:420	BINDING SITE FOR RESIDUE SO4 A1889
14	BC5	SOFTWARE	ALA A:636 , VAL A:637 , LYS A:642	BINDING SITE FOR RESIDUE SO4 A1890
15	BC6	SOFTWARE	HIS A:438 , ARG A:493 , ASP A:494 , THR A:495	BINDING SITE FOR RESIDUE SO4 A1891
16	BC7	SOFTWARE	CYS D:439 , CYS D:442 , CYS D:484 , CYS D:487	BINDING SITE FOR RESIDUE ZN D1877
17	BC8	SOFTWARE	CYS D:159 , CYS D:162 , CYS D:176 , HIS D:179	BINDING SITE FOR RESIDUE ZN D1878
18	BC9	SOFTWARE	CYS D:128	BINDING SITE FOR RESIDUE HG D1879
19	CC1	SOFTWARE	LYS D:717 , ARG D:762	BINDING SITE FOR RESIDUE SO4 D1880
20	CC2	SOFTWARE	GLY D:707 , ARG D:769 , ARG D:773 , TRP D:795	BINDING SITE FOR RESIDUE SO4 D1881
21	CC3	SOFTWARE	HIS D:49 , HIS D:52 , SER D:639 , LYS D:640	BINDING SITE FOR RESIDUE SO4 D1882
22	CC4	SOFTWARE	ARG D:759	BINDING SITE FOR RESIDUE SO4 D1883
23	CC5	SOFTWARE	ARG D:187 , GLU D:188 , LYS D:288	BINDING SITE FOR RESIDUE SO4 D1884
24	CC6	SOFTWARE	TYR D:43 , SER D:45 , ARG D:178	BINDING SITE FOR RESIDUE SO4 D1885
25	CC7	SOFTWARE	ARG D:295 , LYS D:302 , ARG D:346	BINDING SITE FOR RESIDUE SO4 D1886
26	CC8	SOFTWARE	GLU D:208 , LYS D:217 , ARG D:221	BINDING SITE FOR RESIDUE SO4 D1887
27	CC9	SOFTWARE	VAL D:564 , GLU D:565 , GLU D:566	BINDING SITE FOR RESIDUE SO4 D1888
28	DC1	SOFTWARE	GLU D:264 , LEU D:329 , PHE D:330 , GLY D:331 , ARG D:420	BINDING SITE FOR RESIDUE SO4 D1889
29	DC2	SOFTWARE	GLY D:299 , ARG D:300	BINDING SITE FOR RESIDUE SO4 D1890
30	DC3	SOFTWARE	ARG D:352	BINDING SITE FOR RESIDUE SO4 D1891
31	DC4	SOFTWARE	ARG D:364 , PRO D:370 , ARG D:375	BINDING SITE FOR RESIDUE SO4 D1892
32	DC5	SOFTWARE	THR A:247 , ARG A:249 , MET A:338 , HIS A:343 , ASP A:344 , ASP A:347 , 2AD A:1893	BINDING SITE FOR RESIDUE NVA A1892
33	DC6	SOFTWARE	SER A:227 , PHE A:246 , THR A:247 , THR A:248 , VAL A:328 , LEU A:329 , TYR A:332 , ILE A:337 , ARG A:346 , NVA A:1892 , C B:74	BINDING SITE FOR RESIDUE 2AD A1893
34	DC7	SOFTWARE	MET A:40 , PHE A:41 , PRO A:42 , TYR A:43 , ASP A:80 , SER A:504 , TYR A:507 , HIS A:541 , HIS A:545	BINDING SITE FOR RESIDUE LEU A1894
35	DC8	SOFTWARE	MET D:40 , PHE D:41 , TYR D:43 , ASP D:80 , HIS D:541 , HIS D:545	BINDING SITE FOR RESIDUE LEU D1893
36	DC9	SOFTWARE	THR D:247 , ARG D:249 , THR D:252 , MET D:338 , HIS D:343 , ASP D:344 , ASP D:347 , 2AD D:1895	BINDING SITE FOR RESIDUE NVA D1894
37	EC1	SOFTWARE	PHE D:246 , THR D:247 , THR D:248 , VAL D:328 , LEU D:329 , TYR D:332 , ILE D:337 , ARG D:346 , NVA D:1894 , C E:74	BINDING SITE FOR RESIDUE 2AD D1895

(no "SS Bond" information available for 2BTE)

Asymmetric Unit

No.	Residues
1	Glu A:371	-	Pro A:372
2	Leu A:452	-	Pro A:453
3	Met A:530	-	Pro A:531
4	Glu D:371	-	Pro D:372
5	Leu D:452	-	Pro D:453
6	Met D:530	-	Pro D:531

(no "SAP(SNP)/Variant" information available for 2BTE)

(no "PROSITE Motif" information available for 2BTE)

(no "Exon" information available for 2BTE)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:876
 aligned with Q7SIE4_THETH | Q7SIE4 from UniProtKB/TrEMBL  Length:878

    Alignment length:876
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870      
         Q7SIE4_THETH     1 MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVV 876
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhh............eeeeee.........hhhhhhhhhhhhhhhhhhhhh..eee........hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhh....hhhhhhhhhhhhhhhhhh..eeeeeeeeeee....eeehhhh..............eeeeeeeeee.hhhhhhhhhhh......hhhhhhhhhhhhh.eeeeeeeee......eeeeee.hhhhhhhh.eeee....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh........eeeeeeee......eeeeee...........eeeehhhhhhhhhhhhhhh.......ee..................ee..hhhhh..hhhhhhhhhhhhhhhh..eeeeee........ee.........eeee...eeee..............hhhhhh....hhhhhhhhhheee......eee....eehhhhhh.hhhhhh..........hhhhhhhhh...eeeehhhhh.hhhhhhhhhhhhhhhh............ee...eee.eeeeeeeee..eee.hhhhhhhhh....eeehhhhhhh..eeee.....eeeee............hhhhhhhhhhhhhhhhhhhh.......eeehhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhh....hhhhh.....hhhhhh...eeeeeee..eeeeeeee....hhhhhhhhhh....hhhhhhh....eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2bte A   1 MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVV 876
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870

Chain B from PDB  Type:RNA  Length:78
                                                                                                              
                 2bte B   1 GCCGGGGUGGCGGAAUGGGUAGACGCGCAUGACAUCAUGUGCGCAAGCGUGCGGGUUCAAGUCCCGCCCCCGGCACCA  76
                                    10        20|       29  ||    44   |||||48        58        68        
                                              20A          32|       47A|||||                             
                                                            38        47B||||                             
                                                                       47C|||                             
                                                                        47D||                             
                                                                         47E|                             
                                                                          47F

Chain D from PDB  Type:PROTEIN  Length:876
 aligned with Q7SIE4_THETH | Q7SIE4 from UniProtKB/TrEMBL  Length:878

    Alignment length:876
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870      
         Q7SIE4_THETH     1 MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVV 876
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhh............eeeeee.........hhhhhhhhhhhhhhhhhhhhh..eee........hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhh....hhhhhhhhhhhhhhhhhh..eeeeeeeeeee....ee.hhh.ee..ee........eeeeeeeeee.hhhhhhhhhhh......hhhhhhhhhhhhheeeeeeeeee......eeeeee.hhhhhhhh.eeee...hhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...........eeee......eeeeee...........eeeehhhhhhhhhhhhhhh.......ee..................ee.........hhhhhhhhhhhhhhhh..eeeeeee....ee.ee.....ee..eeee....eee.hhhhh........hhhhhh.........hhhhheee......eeee...ee.hhhhhhhhhhhh..........hhhhhhhhh...eeeehhhhh.hhhhhhhhhhhhhhh............eee...eee..eeee.eee..eee..............eee.hhhhhh..eeee.....eeee..ee.........hhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh..hhhhhhhhhh..........................eeeee..eeeeee......hhhhhhhhhhh...hhhhhh.....eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2bte D   1 MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALEKDVVEVAVQVNGRVRGTIHIPKDAPLEVARAEALKVRNVRAHLEGKEVVKEIYVPGKILNLVV 876
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870

Chain E from PDB  Type:RNA  Length:78
                                                                                                              
                 2bte E   1 GCCGGGGUGGCGGAAUGGGUAGACGCGCAUGACAUCAUGUGCGCAAGCGUGCGGGUUCAAGUCCCGCCCCCGGCACCA  76
                                    10        20|       29  ||    44   |||||48        58        68        
                                              20A          32|       47A|||||                             
                                                            38        47B||||                             
                                                                       47C|||                             
                                                                        47D||                             
                                                                         47E|                             
                                                                          47F

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2BTE)

(no "CATH Domain" information available for 2BTE)

(no "Pfam Domain" information available for 2BTE)

Asymmetric Unit(hide GO term definitions)

Chain A,D (Q7SIE4_THETH | Q7SIE4)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0002161	aminoacyl-tRNA editing activity	The hydrolysis of an incorrectly aminoacylated tRNA.
	GO:0004812	aminoacyl-tRNA ligase activity	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
	GO:0004823	leucine-tRNA ligase activity	Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu).
	GO:0016874	ligase activity	Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006429	leucyl-tRNA aminoacylation	The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
	GO:0006450	regulation of translational fidelity	Any process that modulates the ability of the translational apparatus to interpret the genetic code.
	GO:0006418	tRNA aminoacylation for protein translation	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
	GO:0006412	translation	The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Glu A:371 - Pro A:372	[ RasMol ]
		Glu D:371 - Pro D:372	[ RasMol ]
		Leu A:452 - Pro A:453	[ RasMol ]
		Leu D:452 - Pro D:453	[ RasMol ]
		Met A:530 - Pro A:531	[ RasMol ]
		Met D:530 - Pro D:531	[ RasMol ]

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Access by PDB/NDB ID
	2bte
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	6.1.1.4
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	Q7SIE4_THETH \| Q7SIE4
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UniProtKB/TrEMBL
	Q7SIE4_THETH \| Q7SIE4	:	1h3n 1obh 2byt 2v0c 2v0g

1h3n	LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A SULPHAMOYL ANALOGUE OF LEUCYL-ADENYLATE
1obc	LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A POST-TRANSFER EDITING SUBSTRATE ANALOGUE
1obh	LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A PRE-TRANSFER EDITING SUBSTRATE ANALOGUE
2byt	THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 37)

Sites (37, 37)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (12, 12)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File