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(-) Description

Title :  CRYSTAL STRUCTURE OF A HYBRID RIBOSOMAL PROTEIN L30E WITH SURFACE RESIDUES FROM T. CELER, AND CORE RESIDUES FROM YEAST
 
Authors :  C. F. Lee, S. S. Cha, H. S. Lee, K. B. Wong
Date :  07 Apr 05  (Deposition) - 23 Aug 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Ribosomal Protein, Ribonucleoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. F. Lee, S. S. Cha, H. S. Lee, K. B. Wong
Contribution Of Hydrophobic Core And Electrostatic Surface To The Thermodyanmic Stability Of Ribosomal Protein L30E
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 50S RIBOSOMAL PROTEIN L30E
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3D
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: PLYSS
    Mutation: YES
    Organism Scientific: THERMOCOCCUS CELER
    Organism Taxid: 2264

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:20 , ARG A:21 , ARG A:45 , LYS A:99 , HOH A:2125 , HOH A:2126 , HOH A:2127 , HOH A:2128 , HOH A:2129BINDING SITE FOR RESIDUE SO4 A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2BO1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2BO1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2BO1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2BO1)

(-) Exons   (0, 0)

(no "Exon" information available for 2BO1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:101
                                                                                                                                     
               SCOP domains -d2bo1a1 A:1-100 Eukaryotic ribosomal protein L30 (L30e)                                              SCOP domains
               CATH domains 2bo1A00 A:0-100  [code=3.30.1330.30, no name defined]                                                 CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhheeeehhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhhh..eeee..hhhhhhhhh.......eeeeee....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                 2bo1 A   0 MVDIAFELRKVIDSGKYTLGYRKTVQSLKMGGSKLIIIARNTRPDRKEDLEYYARLSGTPVYEFEGTNVELGTAVGKPHTVSVVSILDAGESRILALGGKE 100
                                     9        19        29        39        49        59        69        79        89        99
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2BO1)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  2bo1
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  RL30E_THECE | P29160
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RL30E_THECE | P29160: 1go0 1go1 1h7m 1w3e 1w40 1w41 1w42 3lfo 3n4y 3n4z 3ra5 3ra6

(-) Related Entries Specified in the PDB File

1go0 NMR STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER.
1go1 NMR STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER.
1h7m CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER.
1w3e RIBOSOMAL L30E OF THERMOCOCCUS CELER, P59A MUTANT
1w40 T. CELER L30E K9A VARIANT
1w41 T. CELER L30E E90A VARIANT
1w42 T. CELER L30E R92A VARIANT