Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE FROM STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315
 
Authors :  Y. Kim, P. Quartey, D. Holzle, F. Collart, A. Joachimiak, Midwest Cent Structural Genomics (Mcsg)
Date :  21 Jul 05  (Deposition) - 06 Sep 05  (Release) - 20 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.01
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D,E,F  (4x)
Keywords :  Beta-Alpha-Beta Sandwich, Duplication Of A Half-Domain, Imidazoleglycerol-Phosphate Dehydratase (Igpd), Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Kim, P. Quartey, D. Holzle, F. Collart, A. Joachimiak
Crystal Structure Of Imidazoleglycerol-Phosphate Dehydratas From Staphylococcus Aureus Subsp. Aureus N315
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE
    ChainsA, B, C, D, E, F
    EC Number4.2.1.19
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPMCSG7
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    Organism ScientificSTAPHYLOCOCCUS AUREUS SUBSP. AUREUS
    Organism Taxid158879
    StrainN315
    SynonymIGPD

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (4x)ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 46)

Asymmetric Unit (2, 46)
No.NameCountTypeFull Name
1MG16Ligand/IonMAGNESIUM ION
2MSE30Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 120)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2MSE120Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:36 , HIS A:63 , HIS A:158 , GLU A:162 , MG A:1003BINDING SITE FOR RESIDUE MG A 1001
02AC2SOFTWAREHIS A:62 , GLU A:66 , HIS A:159 , HOH A:1046 , HOH A:1156 , HOH A:1163BINDING SITE FOR RESIDUE MG A 1002
03AC3SOFTWAREMSE A:96 , GLU A:162 , MG A:1001 , HOH A:1157 , HOH A:1163BINDING SITE FOR RESIDUE MG A 1003
04AC4SOFTWAREHIS B:62 , GLU B:66 , HOH B:1018 , HOH B:1154 , HOH B:1160 , HIS C:159BINDING SITE FOR RESIDUE MG B 1004
05AC5SOFTWAREHIS B:159 , HIS F:62 , GLU F:66 , HOH F:1092 , HOH F:1153 , HOH F:1158BINDING SITE FOR RESIDUE MG F 1005
06AC6SOFTWAREARG A:137 , ILE A:141 , HOH A:1081 , PRO B:111 , ILE B:141 , HOH B:1008BINDING SITE FOR RESIDUE MG B 1006
07AC7SOFTWAREHIS B:36 , HIS B:158 , GLU B:162 , HOH B:1159 , HIS F:63BINDING SITE FOR RESIDUE MG B 1007
08AC8SOFTWAREHIS B:63 , HIS C:36 , HIS C:158 , GLU C:162BINDING SITE FOR RESIDUE MG C 1008
09AC9SOFTWAREHIS C:62 , GLU C:66 , HOH C:1036 , HOH C:1155 , HOH C:1164 , HIS D:159BINDING SITE FOR RESIDUE MG C 1009
10BC1SOFTWAREHIS C:63 , HIS D:36 , HIS D:158 , GLU D:162 , HOH D:1148BINDING SITE FOR RESIDUE MG D 1010
11BC2SOFTWAREHIS B:62 , GLU B:130 , LEU B:131 , HOH B:1044 , ASN C:156 , HIS C:158BINDING SITE FOR RESIDUE MG C 1011
12BC3SOFTWAREHIS D:62 , GLU D:66 , HOH D:1142 , HIS F:159 , HOH F:1055 , HOH F:1073BINDING SITE FOR RESIDUE MG F 1012
13BC4SOFTWAREHIS E:36 , HIS E:63 , HIS E:158 , GLU E:162 , HOH E:1203BINDING SITE FOR RESIDUE MG E 1013
14BC5SOFTWAREHIS E:62 , GLU E:66 , HIS E:159 , HOH E:1200 , HOH E:1201 , HOH E:1202BINDING SITE FOR RESIDUE MG E 1014
15BC6SOFTWAREGLU E:98 , GLU E:134 , ARG E:137 , HOH E:1095BINDING SITE FOR RESIDUE MG E 1015
16BC7SOFTWAREHIS D:63 , HIS F:36 , HIS F:158 , GLU F:162BINDING SITE FOR RESIDUE MG F 1016

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2AE8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2AE8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2AE8)

(-) PROSITE Motifs  (2, 12)

Asymmetric Unit (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1IGP_DEHYDRATASE_1PS00954 Imidazoleglycerol-phosphate dehydratase signature 1.HIS7_STAAN59-72
 
 
 
 
 
  6A:60-72
B:60-72
C:60-72
D:60-72
E:60-72
F:61-72
2IGP_DEHYDRATASE_2PS00955 Imidazoleglycerol-phosphate dehydratase signature 2.HIS7_STAAN154-166
 
 
 
 
 
  6A:154-166
B:154-166
C:154-166
D:154-166
E:154-166
F:154-166
Biological Unit 1 (2, 48)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1IGP_DEHYDRATASE_1PS00954 Imidazoleglycerol-phosphate dehydratase signature 1.HIS7_STAAN59-72
 
 
 
 
 
  24A:60-72
B:60-72
C:60-72
D:60-72
E:60-72
F:61-72
2IGP_DEHYDRATASE_2PS00955 Imidazoleglycerol-phosphate dehydratase signature 2.HIS7_STAAN154-166
 
 
 
 
 
  24A:154-166
B:154-166
C:154-166
D:154-166
E:154-166
F:154-166

(-) Exons   (0, 0)

(no "Exon" information available for 2AE8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:171
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
           HIS7_STAAN     1 MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8a1     A:1-84 Imidazole glycerol phosphate dehydra    tase                     d2ae8a2 A:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains -2ae8A0    1 A:2-87 Imidazole glycerol phosphate dehydr    atase; domain 1             2ae8A02 A:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee----.eeeeeee......eee..hhhhhhhhhhhhhhhh.eeeeeee.----hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ae8 A   1 mIYQKQR----TQLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQG----DDHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                            |     |  - |      20        30      | 40        50    |   60        70        80        90 |   | 100       110       120       130       140       150       160       170         
                            |     7   12                       37-MSE            55   60                 79-MSE       92-MSE                                                                                   
                            1-MSE                                                                                         96-MSE                                                                               

Chain B from PDB  Type:PROTEIN  Length:172
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:180
                             1                                                                                                                                                                                  
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179
           HIS7_STAAN     - -MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8b1 B    :0-84 Imidazole glycerol phosphate dehydrat    ase                      d2ae8b2 B:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains 2ae8B01 B    :0-87 Imidazole glycerol phosphate dehydrat    ase; domain 1               2ae8B02 B:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.----.eeeeee......eee..hhhhhhhhhhhhhhhh.eeeeee..----hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2ae8 B   0 AmIYQKQRN----QLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQG----DDHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                             |      |-   |    19        29       |39        49     |   -|       69        79        89  |   | 99       109       119       129       139       149       159       169       179
                             1-MSE  8   13                      37-MSE            55   60                 79-MSE       92-MSE                                                                                   
                                                                                                                           96-MSE                                                                               

Chain C from PDB  Type:PROTEIN  Length:171
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
           HIS7_STAAN     1 MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8c1     C:1-84 Imidazole glycerol phosphate dehydra    tase                     d2ae8c2 C:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains -2ae8C0    1 C:2-87 Imidazole glycerol phosphate dehydr    atase; domain 1             2ae8C02 C:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.----.eeeeeee......eee..hhhhhhhhhhhhhhhh.eeeeeee.----hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhhh.eeeeeeee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ae8 C   1 mIYQKQR----TQLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQG----DDHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                            |     |  - |      20        30      | 40        50    |   60        70        80        90 |   | 100       110       120       130       140       150       160       170         
                            1-MSE 7   12                       37-MSE            55   60                 79-MSE       92-MSE                                                                                   
                                                                                                                          96-MSE                                                                               

Chain D from PDB  Type:PROTEIN  Length:171
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
           HIS7_STAAN     1 MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8d1     D:1-84 Imidazole glycerol phosphate dehydra    tase                     d2ae8d2 D:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains -2ae8D01     D:2-87 Imidazole glycerol phosphate dehydr    atase; domain 1             2ae8D02 D:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..----.eeeeee......eee..hhhhhhhhhhhhhhhh.eeeeee..----hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ae8 D   1 mIYQKQRN----QLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQG----DDHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                            |      | -  |     20        30      | 40        50    |   60        70        80        90 |   | 100       110       120       130       140       150       160       170         
                            1-MSE  8   13                      37-MSE            55   60                 79-MSE       92-MSE                                                                                   
                                                                                                                          96-MSE                                                                               

Chain E from PDB  Type:PROTEIN  Length:171
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:180
                             1                                                                                                                                                                                  
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179
           HIS7_STAAN     - -MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8e1 E    :0-84 Imidazole glycerol phosphate dehydra     tase                     d2ae8e2 E:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains 2ae8E01 E    :0-87 Imidazole glycerol phosphate dehydra     tase; domain 1              2ae8E02 E:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.----.eeeeee.......ee..hhhhhhhhhhhhhhhh.eeeeee.-----hhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhhh.eeeeeeee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2ae8 E   0 AmIYQKQRN----QLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQ-----DDHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                             |      |-   |    19        29       |39        49    |    -|       69        79        89  |   | 99       109       119       129       139       149       159       169       179
                             1-MSE  8   13                      37-MSE           54    60                 79-MSE       92-MSE                                                                                   
                                                                                                                           96-MSE                                                                               

Chain F from PDB  Type:PROTEIN  Length:170
 aligned with HIS7_STAAN | P64373 from UniProtKB/Swiss-Prot  Length:192

    Alignment length:179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
           HIS7_STAAN     1 MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
               SCOP domains d2ae8f1     F:1-84 Imidazole glycerol phosphate dehydra     tase                    d2ae8f2 F:85-179 Imidazole glycerol phosphate dehydratase                                       SCOP domains
               CATH domains -2ae8F0    1 F:2-87 Imidazole glycerol phosphate dehydr     atase; domain 1            2ae8F02 F:88-179 Imidazole glycerol phosphate dehydratase; domain 1                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee----.eeeeeee......eee..hhhhhhhhhhhhhhhh.eeeeeee.-----hhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.....eeeee......ee..ee.hhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------IGP_DEHYDRATAS---------------------------------------------------------------------------------IGP_DEHYDRATA------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ae8 F   1 mIYQKQR----TQLNISISDDQSPSHINTGVGFLNHmLTLFTFHSGLSLNIEAQG-----DHHVTEDIGIVIGQLLLEmIKDKKHFVRYGTmYIPmDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT 179
                            |     |  - |      20        30      | 40        50    |    -|       70        80        90 |   | 100       110       120       130       140       150       160       170         
                            1-MSE 7   12                       37-MSE            55    61                79-MSE       92-MSE                                                                                   
                                                                                                                          96-MSE                                                                               

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit

(-) CATH Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2AE8)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (HIS7_STAAN | P64373)
molecular function
    GO:0004424    imidazoleglycerol-phosphate dehydratase activity    Catalysis of the reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H(2)O.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0000105    histidine biosynthetic process    The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MSE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2ae8)
 
Biological Unit
  Complete Structure
    Biological Unit 1  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2ae8
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  HIS7_STAAN | P64373
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  4.2.1.19
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  HIS7_STAAN | P64373
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2AE8)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2AE8)