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(-) Description

Title :  STRUCTURE OF C406A ARGININE DEIMINASE IN COMPLEX WITH L-ARGININE
 
Authors :  A. Galkin, X. Lu, D. Dunaway-Mariano, O. Herzberg
Date :  11 Jul 05  (Deposition) - 09 Aug 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  A,D  (1x)
Keywords :  Arginine Degradation Pathway, L-Arginine Deiminase, Catalytic Mechanism, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Galkin, X. Lu, D. Dunaway-Mariano, O. Herzberg
Crystal Structures Representing The Michaelis Complex And The Thiouronium Reaction Intermediate Of Pseudomonas Aeruginosa Arginine Deiminase.
J. Biol. Chem. V. 280 34080 2005
PubMed-ID: 16091358  |  Reference-DOI: 10.1074/JBC.M505471200

(-) Compounds

Molecule 1 - ARGININE DEIMINASE
    Chains: A, B, C, D
    EC Number: 3.5.3.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET100-ADIN
    Expression System Strain: BL21(DE3)STAR
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ARCA
    Mutation: YES
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Synonym: ADI, ARGININE DIHYDROLASE, AD

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): ABCD
Biological Unit 2 (1x):  BC 
Biological Unit 3 (1x): A  D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1ARG4Mod. Amino AcidARGININE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1ARG4Mod. Amino AcidARGININE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ARG2Mod. Amino AcidARGININE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1ARG2Mod. Amino AcidARGININE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:41 , ASN A:160 , PHE A:163 , ARG A:165 , ASP A:166 , ARG A:185 , GLY A:226 , ARG A:243 , HIS A:278 , ASP A:280 , THR A:281 , ASN A:360 , GLY A:400 , ARG A:401 , ALA A:406BINDING SITE FOR RESIDUE ARG A 1500
2AC2SOFTWARELEU B:41 , ASN B:160 , ARG B:165 , ASP B:166 , ARG B:185 , GLY B:226 , ARG B:243 , HIS B:278 , ASP B:280 , THR B:281 , ASN B:360 , GLY B:400 , ARG B:401 , ALA B:406 , HOH B:2526 , HOH B:2659BINDING SITE FOR RESIDUE ARG B 2500
3AC3SOFTWARELEU C:41 , ASN C:160 , PHE C:163 , ARG C:165 , ASP C:166 , ARG C:185 , GLY C:226 , ARG C:243 , HIS C:278 , ASP C:280 , THR C:281 , ASN C:360 , GLY C:400 , ARG C:401 , ALA C:406 , HOH C:3545BINDING SITE FOR RESIDUE ARG C 3500
4AC4SOFTWARELEU D:41 , ASN D:160 , ASP D:166 , ARG D:185 , GLY D:226 , ARG D:243 , HIS D:278 , ASP D:280 , THR D:281 , ASN D:360 , GLY D:400 , ARG D:401 , ALA D:406 , HOH D:4620BINDING SITE FOR RESIDUE ARG D 4500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2A9G)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2A9G)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2A9G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2A9G)

(-) Exons   (0, 0)

(no "Exon" information available for 2A9G)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:406
 aligned with ARCA_PSEAE | P13981 from UniProtKB/Swiss-Prot  Length:418

    Alignment length:414
                                                                                                                                                                                                                                                                                                                                                                                                                                                      418 
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415  | 
          ARCA_PSEAE      6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHCMTCPIVRDPIDY-    -
               SCOP domains d2a9ga1 A:6-417 Arginine deiminase                                                                                                                                                                                                                                                                                                                                                                                           - SCOP domains
               CATH domains 2a9gA01 A:6-71,A:157-417                                          -------------------------------------------------------------------------------------2a9gA01 A:6-71,A:157-417 L-arginine/glycine Amidinotransferase; Chain A                                                                                                                                                                                               - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee......eeeeee...hhhhhh...............hhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhh.........hhhhhhhhhheee...eeee....hhhhhhhhhhhhhhhhhh........eeeee...........hhh.ee.....eeeeee....hhhhhhhhhhhhhhh....eeeeee........hhhhheeeee..eeeehhhhhh..eeeeeee.......eeeee...hhhhhhhhhh.....eeee..-------..........eeee..eeeee..hhhhhhhhhhh..eeeeehhhhhhhhh..hhhhheeeee....-. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2a9g A    6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETG-------REQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHAMTCPIVRDPID-R 1500
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335        |-      |355       365       375       385       395       405       415 | |
                                                                                                                                                                                                                                                                                                                                                                            344     352                                                              417 |
                                                                                                                                                                                                                                                                                                                                                                                                                                                      1500


Chain B from PDB  Type:PROTEIN  Length:406
 aligned with ARCA_PSEAE | P13981 from UniProtKB/Swiss-Prot  Length:418

    Alignment length:413
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415   
          ARCA_PSEAE      6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHCMTCPIVRDPIDY  418
               SCOP domains d2a9gb_ B: Arginine deiminase                                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 2a9gB01 B:6-71,B:157-416                                          -------------------------------------------------------------------------------------2a9gB01 B:6-71,B:157-416 L-arginine/glycine Amidinotransferase; Chain A                                                                                                                                                                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee......eeeeee...hhhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhh...eeeehhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh.hhhhhhhhhhhhee.hhh..hhhhhhhhhhhhhhh...eee..hhhhhhhhhheeee..eeee.........hhhhhhhhhhhhhhhhhh...eeeee...........hhh.eeeee..eeeeee....hhhhhhhhhhhhhhh....eeeeee.....--.hhhh.eeeee..eeeehhhhhh..eeeeeee.......eeeee...hhhhhhhhhh.....eeee..----.............eeee..eeeee..hhhhhhhhhhh..eeeee...hhhhhh.......eeeee...-. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                2a9g B    6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSR--MHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETG----AAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHAMTCPIVRDPI-R 2500
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265        |- |     285       295       305       315       325       335        |-   |   355       365       375       385       395       405       415| |
                                                                                                                                                                                                                                                                                                      274  |                                                                344  349                                                                416 |
                                                                                                                                                                                                                                                                                                         277                                                                                                                                         2500


Chain C from PDB  Type:PROTEIN  Length:403
 aligned with ARCA_PSEAE | P13981 from UniProtKB/Swiss-Prot  Length:418

    Alignment length:414
                                                                                                                                                                                                                                                                                                                                                                                                                                                      418 
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415  | 
          ARCA_PSEAE      6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHCMTCPIVRDPIDY-    -
               SCOP domains d2a9gc_ C: Arginine deiminase                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 2a9gC01 C:6-71,C:157-417                                          -------------------------------------------------------------------------------------2a9gC01 C:6-71,C:157-417 L-arginine/glycine Amidinotransferase; Chain A                                                                                                                                                                                               - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee......eeeeee...hhhhhh...............hhhhhhhhhhhhhhhhhh...eeeehhhhhhhhh.hhhhhhhhhhhhh........hhhhhhhhhhh.hhhhhhhhhhhhee......hhhhhhhhhhhhhhh...eee..hhhhhhhhhheee...eeee.........hhhhhhhhhhhhhhhhhh...eeee............hhh.ee.....eeeeee....hhhhhhhhhhhhhhh....eeeeee...---..hhhh.eeeee..eeeehhhhhh..eeeeeee.......eeeee...hhhhhhhhhh.....eeee..-------..........eeee..eeeee..hhhhhhhhhhh..eeeee...hhhhhh.......eeeee....-. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2a9g C    6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPK---AMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETG-------REQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHAMTCPIVRDPID-R 3500
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265      |  -|      285       295       305       315       325       335        |-      |355       365       375       385       395       405       415 | |
                                                                                                                                                                                                                                                                                                    272 276                                                                 344     352                                                              417 |
                                                                                                                                                                                                                                                                                                                                                                                                                                                      3500


Chain D from PDB  Type:PROTEIN  Length:407
 aligned with ARCA_PSEAE | P13981 from UniProtKB/Swiss-Prot  Length:418

    Alignment length:414
                                                                                                                                                                                                                                                                                                                                                                                                                                                      418 
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415  | 
          ARCA_PSEAE      6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHCMTCPIVRDPIDY-    -
               SCOP domains d2a9gd_ D: Arginine deiminase                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 2a9gD01 D:6-71,D:157-417                                          -------------------------------------------------------------------------------------2a9gD01 D:6-71,D:157-417 L-arginine/glycine Amidinotransferase; Chain A                                                                                                                                                                                               - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee......eeeeee...hhhhhh...............hhhhhhhhhhhhhhhhhh...eeeehhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh.hhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhh..........hhhhhhhhhheee...eeee....hhhhhhhhhhhhhhhhhhhhhhh...eeeee...........hhh.eeeee..eeeeee....hhhhhhhhhhhhhhh....eeeeee........hhhh.eeeee..eeeehhhhhh..eeeeee.........eeee...hhhhhhhhh......eeee...------..........eeee..eeeee..hhhhhhhhhhh..eeeee...hhhhhh.......eeeee....-. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2a9g D    6 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETGG------REQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHAMTCPIVRDPID-R 4500
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345      |355       365       375       385       395       405       415 | |
                                                                                                                                                                                                                                                                                                                                                                             345    352                                                              417 |
                                                                                                                                                                                                                                                                                                                                                                                                                                                      4500
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2A9G)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ARCA_PSEAE | P13981)
molecular function
    GO:0016990    arginine deiminase activity    Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0006527    arginine catabolic process    The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0019547    arginine catabolic process to ornithine    The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.
    GO:0019546    arginine deiminase pathway    The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine and CO2, using the enzyme arginine deiminase.
    GO:0006525    arginine metabolic process    The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0018101    protein citrullination    The hydrolysis of peptidyl-arginine to form peptidyl-citrulline.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  2a9g
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  3.5.3.6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        ARCA_PSEAE | P13981: 1rxx 2aaf 2abr 2aci

(-) Related Entries Specified in the PDB File

1rxx 2aaf 2abr 2aci