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(-) Description

Title :  CRYSTAL STRUCTURE OF CHONDROITIN POLYMERASE FROM ESCHERICHIA COLI STRAIN K4 (K4CP) COMPLEXED WITH UDP-GLCUA AND UDP
 
Authors :  T. Osawa, N. Sugiura, H. Shimada, R. Hirooka, A. Tsuji, M. Kimura, K. Kimata, Y. Kakuta
Date :  03 Sep 07  (Deposition) - 16 Sep 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Gt-A, Glycosyltransferase A, Fold (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Osawa, N. Sugiura, H. Shimada, R. Hirooka, A. Tsuji, M. Kimura, K. Kimata, Y. Kakuta
Structural Basis For Glycosaminoglycan Synthetic Reaction By Chondroitin Polymerase
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CHONDROITIN SYNTHASE
    Chains: A, B, C, D
    EC Number: 2.4.1.175, 2.4.1.226
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T3
    Expression System Strain: BL21(DE3)CODONPLUSRIL
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 58-682
    Gene: KFOC
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Strain: K4
    Synonym: CS, CHONDROITIN POLYMERASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 16)

Asymmetric Unit (3, 16)
No.NameCountTypeFull Name
1MN8Ligand/IonMANGANESE (II) ION
2UDP2Ligand/IonURIDINE-5'-DIPHOSPHATE
3UGA6Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION
2UDP1Ligand/IonURIDINE-5'-DIPHOSPHATE
3UGA3Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1MN-1Ligand/IonMANGANESE (II) ION
2UDP1Ligand/IonURIDINE-5'-DIPHOSPHATE
3UGA3Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:161 , ASP A:241 , HIS A:386 , HOH A:790BINDING SITE FOR RESIDUE MN A 1
02AC2SOFTWAREASP A:521BINDING SITE FOR RESIDUE MN A 2
03AC3SOFTWAREASP B:241 , HIS B:386 , HOH B:820BINDING SITE FOR RESIDUE MN B 3
04AC4SOFTWAREASP B:521 , HIS B:631 , HOH B:821 , HOH B:822BINDING SITE FOR RESIDUE MN B 4
05AC5SOFTWAREASP C:241 , HIS C:386 , HOH C:853BINDING SITE FOR RESIDUE MN C 5
06AC6SOFTWAREASP C:521 , HIS C:631 , HOH C:795BINDING SITE FOR RESIDUE MN C 6
07AC7SOFTWAREASP D:241 , HIS D:386 , HOH D:807BINDING SITE FOR RESIDUE MN D 7
08AC8SOFTWAREASP D:521 , HIS D:631BINDING SITE FOR RESIDUE MN D 8
09AC9SOFTWAREPRO B:157 , THR B:158 , TYR B:159 , ARG B:161 , ASP B:188 , TYR B:217 , LEU B:219 , ASP B:239 , CYS B:240 , ASP B:241 , HIS B:386 , HOH B:796 , HOH B:798 , HOH B:820BINDING SITE FOR RESIDUE UDP B 1
10BC1SOFTWAREALA B:440 , TYR B:441 , ASP B:469 , ASN B:496 , GLY B:498 , ILE B:499 , GLN B:517 , ASP B:519 , SER B:520 , ASP B:521 , HIS B:581 , ALA B:603 , ASP B:605 , ARG B:628 , HIS B:631 , HOH B:730 , HOH B:822BINDING SITE FOR RESIDUE UGA B 683
11BC2SOFTWAREPRO D:157 , THR D:158 , TYR D:159 , ARG D:161 , ASP D:188 , GLY D:216 , TYR D:217 , LEU D:219 , ARG D:223 , ASP D:239 , ASP D:241 , ARG D:268 , GLY D:335 , GLU D:361 , ASP D:362 , HIS D:386 , HOH D:775 , HOH D:780 , HOH D:787 , HOH D:807BINDING SITE FOR RESIDUE UGA D 683
12BC3SOFTWAREPRO D:439 , TYR D:441 , ASP D:469 , ASN D:496 , GLY D:498 , ILE D:499 , ALA D:502 , GLN D:517 , ASP D:519 , SER D:520 , ASP D:521 , HIS D:581 , ARG D:583 , ASN D:602 , ALA D:603 , ASP D:605 , ARG D:628 , HOH D:776 , HOH D:802BINDING SITE FOR RESIDUE UGA D 684
13BC4SOFTWAREPRO C:157 , THR C:158 , TYR C:159 , ARG C:161 , ASP C:188 , TYR C:217 , LEU C:219 , ASP C:239 , CYS C:240 , ASP C:241 , HIS C:386 , HOH C:819 , HOH C:853BINDING SITE FOR RESIDUE UDP C 1
14BC5SOFTWAREPRO C:439 , TYR C:441 , ASP C:469 , ASN C:496 , GLY C:498 , ILE C:499 , ALA C:502 , GLN C:517 , ASP C:519 , SER C:520 , ASP C:521 , HIS C:581 , ASN C:602 , ALA C:603 , ASP C:605 , ARG C:628 , HIS C:631 , HOH C:787 , HOH C:795 , HOH C:811BINDING SITE FOR RESIDUE UGA C 683
15BC6SOFTWAREPRO A:157 , THR A:158 , TYR A:159 , ARG A:161 , ASP A:188 , GLY A:216 , TYR A:217 , LEU A:219 , ARG A:223 , ASP A:239 , CYS A:240 , ARG A:268 , GLU A:361 , ASP A:362 , HIS A:386 , HOH A:735BINDING SITE FOR RESIDUE UGA A 683
16BC7SOFTWAREPRO A:439 , TYR A:441 , ASP A:469 , ASN A:496 , ILE A:499 , GLN A:517 , ASP A:519 , SER A:520 , HIS A:581 , ARG A:583 , ASN A:602 , ALA A:603 , ASP A:605BINDING SITE FOR RESIDUE UGA A 684

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Z86)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2Z86)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Z86)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Z86)

(-) Exons   (0, 0)

(no "Exon" information available for 2Z86)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:580
 aligned with CHS_ECOLX | Q8L0V4 from UniProtKB/Swiss-Prot  Length:686

    Alignment length:622
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680  
            CHS_ECOLX    61 IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh.....hhhhhhhhhhhhhhhh....ee...........................hhhhhhh....-------.....eeeeeee..hhhhhhhhhhhhhh......eeeeeeee....hhhhhhhh......eeeeee.....hhhhhhhhhhhhh...eeeee...eee..hhhhhhhhhhhhh..eeee..eeee.....hhhhhhhh.hhhhh...---------------...hhhhhhhhh.......hhhhhh...eeeeehhhhhhhh..........hhhhhhhhhhhhh..eeee.hhh.eeee...----------------...........................eeeeeee.....hhhhhhhhhhh.....eeeeeeee....hhhhhhhhhhh....eeeeee...hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhhh....eeeeeeeee.....eeee.......hhhhhh........eeeehhhhh...........hhhhhhhhhhh....eeeeeeeeeeee..----...hhhhhhhhhhhhhhhhh.......eeeee.........eeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2z86 A  61 IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKEL-------LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPE---------------SVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPP----------------QLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLH----SIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
                                    70        80        90       100       110       120       130        |-      |150       160       170       180       190       200       210       220       230       240       250       260       270       280       290  |      -       310       320       330       340       350       360       370       380       390         -      |410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630|    | 640       650       660       670       680  
                                                                                                        139     147                                                                                                                                               293             309                                                                              390              407                                                                                                                                                                                                                             631  636                                              


Chain B from PDB  Type:PROTEIN  Length:601
 aligned with CHS_ECOLX | Q8L0V4 from UniProtKB/Swiss-Prot  Length:686

    Alignment length:625
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677     
            CHS_ECOLX    58 KAVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................................hhhhhhh..-------.......eeeeeee..hhhhhhhhhhhhhh......eeeeeeee....hhhhhhhh......eeeeee.....hhhhhhhhhhhhh...eeeee...eee..hhhhhhhhhhhhh..eeee..eeee.....hhhhhhhh.hhhhh.......---------......hhhhhh.........hhhhhh...eeeee.hhhhhh...........hhhhhhhhhhhhh..eeee.hhh.eeee........-------..hhhhhhh......................eeeeeee.....hhhhhhhhhhh.....eeeeeee.....hhhhhhhhhhh....eeeee....hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhhh....eeeeeeeee.....eee........hhhhhh........eeeehhhhhh..........hhhhhhhhhhhh...eeeeeeeeeeee...-...hhhhhhhhhhhhhhhhhhhhhhh....eeee.........eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2z86 B  58 KAVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRK-------KQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITN---------NKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENE-------NITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHG-NTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       | -     | 407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |637       647       657       667       677     
                                                                                                         137     145                                                                                                                                                     297       307                                                                                     395     403                                                                                                                                                                                                                                  632 |                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          634                                                


Chain C from PDB  Type:PROTEIN  Length:603
 aligned with CHS_ECOLX | Q8L0V4 from UniProtKB/Swiss-Prot  Length:686

    Alignment length:624
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678    
            CHS_ECOLX    59 AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhh.....hhhhhhhhhhhhhhhh....ee...........................hhhhhhhh.....----......eeeeeee..hhhhhhhhhhhhhh......eeeeeeee.....hhhhhhhhh....eeeeee.....hhhhhhhhhhhhh...eeeee...eee..hhhhhhhhhhhhh..eeee..eeee.....hhhhhhhh.............--------.....hhhhhhhhhh.......hhhhhh...eeeeehhhhhhhh..........hhhhhhhhhhhhh..eeee.hhh.eeee......---------..hhhhhh.......................eeeeeee..hhhhhhhhhhhhhh.....eeeeeeee....hhhhhhhhhhh....eeeeee...hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhhh....eeeeeeeee.....eeee.......hhhhhh........eeeehhhhh...........hhhhhhhhhhh....eeeeeeeeeeee.hhh....hhhhhhhhhhhhhhhhhh.......eeeee.........eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2z86 C  59 AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDD----QLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITN--------QNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKE---------NITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
                                    68        78        88        98       108       118       128       138  |    148       158       168       178       188       198       208       218       228       238       248       258       268       278       288        |-       308       318       328       338       348       358       368       378       388    |    -    |  408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678    
                                                                                                            141  146                                                                                                                                                    297      306                                                                                    393       403                                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:594
 aligned with CHS_ECOLX | Q8L0V4 from UniProtKB/Swiss-Prot  Length:686

    Alignment length:624
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678    
            CHS_ECOLX    59 AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D01 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D02 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D03 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D04 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D05 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D06 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D07 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Glycos_transf_2-2z86D08 D:435-592                                                                                                                             ------------------------------------------------------------------------------------------ Pfam domains (8)
         Sec.struct. author .....hhhhhhhhhhh.....hhhhhhhhhhhhhhhh....ee...........................hhhhhhhh..--------.....eeeeeee..hhhhhhhhhhhhhh......eeeeeeee....hhhhhhhhh.....eeeeee.....hhhhhhhhhhhhh...eeeee...eee..hhhhhhhhhhhhh..eeee..eee......hhhhhhhh.hhhhh....ee..........ee..hhhhhhhhh........hhhhhh...eeeee..hhhhhh..........hhhhhhhhhhhhh..eeee.hhh.eee.....-------------.hhhhhhhh....................eeeeeee.....hhhhhhhhhhh.....eeeeeeee....hhhhhhhhhhh....eeeeee...hhhhhhhhhhhhh...eeee.....ee..hhhhhhhhhhhhh....eeeeeeeeee....eeee.......hhhhhhhh......eeeehhhhhh..........hhhhhhhhhhh....eeeeeeeeeeeee.---------hhhhhhhhhhhhhhhh.........ee.........ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2z86 D  59 AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKE--------LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPG-------------TVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLH---------DIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI 682
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388  |      -      |408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628  |      -  |    648       658       668       678    
                                                                                                         138      147                                                                                                                                                                                                                                                 391           405                                                                                                                                                                                                                               631       641
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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Z86)

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(-) Pfam Domains  (1, 8)

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Clan: GT-A (172)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (CHS_ECOLX | Q8L0V4)
molecular function
    GO:0050510    N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity    Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.
    GO:0047238    glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity    Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016757    transferase activity, transferring glycosyl groups    Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

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  2.4.1.175
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 Related Entries

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        CHS_ECOLX | Q8L0V4: 2z87

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