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(-) Description

Title :  THE CONSERVED CANDIDA ALBICANS CA3427 GENE PRODUCT DEFINES A NEW FAMILY OF PROTEINS EXHIBITING THE GENERIC PERIPLASMIC BINDING PROTEIN STRUCTURAL FOLD
 
Authors :  S. Santini, V. Monchois, N. Mouz, T. Rousselle, J. M. Claverie, C. Aberg
Date :  03 Mar 10  (Deposition) - 23 Mar 11  (Release) - 27 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Santini, J. M. Claverie, N. Mouz, T. Rousselle, C. Maza, V. Monchois, C. Abergel
The Conserved Candida Albicans Ca3427 Gene Product Defines A New Family Of Proteins Exhibiting The Generic Periplasmic Binding Protein Structural Fold
Plos One V. 6 18528 2011
PubMed-ID: 21494601  |  Reference-DOI: 10.1371/JOURNAL.PONE.0018528

(-) Compounds

Molecule 1 - POSSIBLE THIAMINE BIOSYNTHESIS ENZYME
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSF04, PQE80
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: CANDIDA ALBICANS
    Organism Taxid: 5476
    Strain: NIH3147
    Synonym: CA3427

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 5)

Asymmetric/Biological Unit (3, 5)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2GOL1Ligand/IonGLYCEROL
3MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:85 , LEU A:87 , GLU A:164 , TYR A:184 , THR A:248 , HOH A:2220BINDING SITE FOR RESIDUE GOL A1307
2AC2SOFTWAREASN A:52 , ASP A:181 , GLN A:182 , ASP A:197 , HOH A:2032 , HOH A:2091 , HOH A:2130BINDING SITE FOR RESIDUE CA A1308
3AC3SOFTWAREGLY A:71 , GLU A:73 , HOH A:2034 , HOH A:2204 , HOH A:2205BINDING SITE FOR RESIDUE CA A1309

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X7Q)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2X7Q)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X7Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2X7Q)

(-) Exons   (0, 0)

(no "Exon" information available for 2X7Q)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
 aligned with Q59X88_CANAL | Q59X88 from UniProtKB/TrEMBL  Length:299

    Alignment length:306
                                                                                                                                                                                                                                                                                                                                    299       
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290        |-      
         Q59X88_CANAL     1 MPTLKVAYIPEHFSTPLFFAQQQGYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVMSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLKDGVEGSDAFMWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYISSNLDYSAEDAKEWTKTVEFNSRIGKTPLDWDTIVVKTKDTLKLAGVLAESDDVILKRLNSNVKKTNL-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ----------NMT1-2x7qA01 A:11-227                                                                                                                                                                                                    ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhh....eeeeehhhhhhhhhh....eeeeeeee....eeeeeee.......hhhhh.eeee....hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhh.........eeeeehhhhhhhhhh..eeeeeeee.....eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.............hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2x7q A   1 LPTLKVAYIPEHFSTPLFFAQQQGYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVmSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLKDGVEGSDAFmWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYISSNLDYSAEDAKEWTKTVEFNSRIGKTPLDWDTIVVKTKDTLKLAGVLAESDDVILKRLNSNVKKTNLQLDGDLE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160 |     170       180       190       200       210       220       230       240       250       260       270       280       290       300      
                                                                                                                                                 120-MSE                                   162-MSE
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2X7Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2X7Q)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: PBP (391)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q59X88_CANAL | Q59X88)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q59X88_CANAL | Q59X88: 2x7p

(-) Related Entries Specified in the PDB File

2x7p THE CONSERVED CANDIDA ALBICANS CA3427 GENE PRODUCT DEFINES A NEW FAMILY OF PROTEINS EXHIBITING THE GENERIC PERIPLASMIC BINDING PROTEIN STRUCTURAL FOLD