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(-) Description

Title :  THE CONSERVED CANDIDA ALBICANS CA3427 GENE PRODUCT DEFINES A NEW FAMILY OF PROTEINS EXHIBITING THE GENERIC PERIPLASMIC BINDING PROTEIN STRUCTURAL FOLD
 
Authors :  S. Santini, V. Monchois, N. Mouz, T. Rousselle, J. M. Claverie, C. Aberg
Date :  03 Mar 10  (Deposition) - 16 Mar 11  (Release) - 27 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.34
Chains :  Asym./Biol. Unit :  A
Keywords :  Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Santini, J. M. Claverie, N. Mouz, T. Rousselle, C. Maza, V. Monchois C. Abergel
The Conserved Candida Albicans Ca3427 Gene Product Defines A New Family Of Proteins Exhibiting The Generic Periplasmic Binding Protein Structural Fold
Plos One V. 6 18528 2011
PubMed-ID: 21494601  |  Reference-DOI: 10.1371/JOURNAL.PONE.0018528

(-) Compounds

Molecule 1 - POSSIBLE THIAMINE BIOSYNTHESIS ENZYME
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSF04, PQE80
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: CANDIDA ALBICANS
    Organism Taxid: 5476
    Strain: NIH3147
    Synonym: CA3427

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 13)

Asymmetric/Biological Unit (7, 13)
No.NameCountTypeFull Name
1ACY5Ligand/IonACETIC ACID
2AE31Ligand/Ion2-(2-ETHOXYETHOXY)ETHANOL
3CA1Ligand/IonCALCIUM ION
4CL1Ligand/IonCHLORIDE ION
5CO21Ligand/IonCARBON DIOXIDE
6GOL2Ligand/IonGLYCEROL
7MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:97 , PHE A:136 , GLN A:137BINDING SITE FOR RESIDUE CA A 309
02AC2SOFTWAREGLY A:71BINDING SITE FOR RESIDUE CL A 310
03AC3SOFTWAREASP A:98 , VAL A:99 , LYS A:103 , GLN A:104 , GLY A:154 , ASP A:159BINDING SITE FOR RESIDUE GOL A 311
04AC4SOFTWAREHIS A:12 , PHE A:13 , PRO A:85 , LEU A:86 , LEU A:87 , GLU A:164 , PHE A:166 , TRP A:245 , THR A:248 , HOH A:2139BINDING SITE FOR RESIDUE GOL A 312
05AC5SOFTWAREILE A:9 , SER A:42 , LEU A:60 , GLU A:164 , THR A:167 , TRP A:190 , HOH A:2140BINDING SITE FOR RESIDUE AE3 A 313
06AC6SOFTWARELYS A:83 , PRO A:186 , TRP A:187 , THR A:264BINDING SITE FOR RESIDUE ACY A 314
07AC7SOFTWARELYS A:37 , GLU A:40 , ARG A:44BINDING SITE FOR RESIDUE ACY A 315
08AC8SOFTWARELEU A:60 , GLU A:62 , GLY A:116BINDING SITE FOR RESIDUE ACY A 316
09AC9SOFTWAREASN A:252 , ARG A:254 , HOH A:2032 , HOH A:2111BINDING SITE FOR RESIDUE ACY A 317
10BC1SOFTWAREASN A:50 , ASN A:52 , ASP A:181 , GLN A:182 , ASP A:197BINDING SITE FOR RESIDUE ACY A 318
11BC2SOFTWARETRP A:88 , GLU A:164 , HOH A:2140BINDING SITE FOR RESIDUE CO2 A2592

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X7P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2X7P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X7P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2X7P)

(-) Exons   (0, 0)

(no "Exon" information available for 2X7P)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
 aligned with Q59X88_CANAL | Q59X88 from UniProtKB/TrEMBL  Length:299

    Alignment length:306
                                                                                                                                                                                                                                                                                                                                    299       
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290        |-      
         Q59X88_CANAL     1 MPTLKVAYIPEHFSTPLFFAQQQGYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVMSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLKDGVEGSDAFMWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYISSNLDYSAEDAKEWTKTVEFNSRIGKTPLDWDTIVVKTKDTLKLAGVLAESDDVILKRLNSNVKKTNL-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ----------NMT1-2x7pA01 A:11-227                                                                                                                                                                                                    ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee..hhhhhhhhhhhhhhhhhhh......ee...hhhhhhhhhhh....eeeeehhhhhhhhhh....eeeeeeee....eeeeeee.............eeee....hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhh.........eeeeehhhhhhhhhh..eeeeeeee.....eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2x7p A   1 LPTLKVAYIPEHFSTPLFFAQQQGYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVmSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLKDGVEGSDAFmWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYISSNLDYSAEDAKEWTKTVEFNSRIGKTPLDWDTIVVKTKDTLKLAGVLAESDDVILKRLNSNVKKTNLQLDGDLE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160 |     170       180       190       200       210       220       230       240       250       260       270       280       290       300      
                                                                                                                                                 120-MSE                                   162-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2X7P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2X7P)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: PBP (391)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q59X88_CANAL | Q59X88)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

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UniProtKB/TrEMBL
        Q59X88_CANAL | Q59X88: 2x7q

(-) Related Entries Specified in the PDB File

2x7q THE CONSERVED CANDIDA ALBICANS CA3427 GENE PRODUCT DEFINES A NEW FAMILY OF PROTEINS EXHIBITING THE GENERIC PERIPLASMIC BINDING PROTEIN STRUCTURAL FOLD