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(-) Description

Title :  APO STRUCTURE OF A METALLO-B-LACTAMASE
 
Authors :  F. Garces, F. J. Fernandez, E. Penya-Soler, J. Aguilar, L. Baldoma, M. Coll, J. Badia, M. C. Vega
Date :  16 Nov 09  (Deposition) - 14 Apr 10  (Release) - 19 May 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Garces, F. J. Fernandez, C. Montella, E. Penya-Soler, R. Prohens, J. Aguilar, L. Baldoma, M. Coll, J. Badia, M. C. Vega
Molecular Architecture Of The Mn(2+)Dependent Lactonase Ulag Reveals An Rnase-Like Metallo-Beta- Lactamase Fold And A Novel Quaternary Structure.
J. Mol. Biol. V. 398 715 2010
PubMed-ID: 20359483  |  Reference-DOI: 10.1016/J.JMB.2010.03.041
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - L-ASCORBATE-6-PHOSPHATE LACTONASE ULAG
    Chains: A, B, C, D, E, F
    EC Number: 3.1.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: METALLO-B-LACTAMASE, L-ASCORBATE UTILIZATION PROTEIN G

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 70)

Asymmetric/Biological Unit (3, 70)
No.NameCountTypeFull Name
1FOR2Mod. ResidueFORMYL GROUP
2GOL20Ligand/IonGLYCEROL
3MSE48Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:23 , GLU A:27 , GLY A:318 , TYR A:332 , PRO A:335 , HOH A:2068 , LEU F:95BINDING SITE FOR RESIDUE GOL A1339
02AC2SOFTWAREASP A:61 , PHE A:62 , LEU A:114 , HIS A:122 , ILE A:123 , ASP A:124 , VAL A:127 , TRP A:151BINDING SITE FOR RESIDUE GOL A1340
03AC3SOFTWAREASP A:149 , ASN C:126 , ILE D:7 , SER D:11 , SER D:15BINDING SITE FOR RESIDUE GOL A1341
04AC4SOFTWARETRP B:23 , GLU B:27 , GLY B:318 , PRO B:335 , HOH B:2059 , PRO E:93BINDING SITE FOR RESIDUE GOL B1338
05AC5SOFTWAREASP B:61 , PHE B:62 , LEU B:114 , ALA B:115 , HIS B:122 , ILE B:123 , ASP B:124 , VAL B:127 , ALA B:128 , TRP B:151 , HOH B:2009BINDING SITE FOR RESIDUE GOL B1339
06AC6SOFTWAREMSE C:1 , SER E:15BINDING SITE FOR RESIDUE FOR C1337
07AC7SOFTWAREASN C:25 , GLU C:29 , ILE C:107 , ARG C:108 , GLN C:109BINDING SITE FOR RESIDUE GOL C1338
08AC8SOFTWARETRP C:23 , GLU C:27 , GLY C:318 , TYR C:334 , PRO C:335 , HOH C:2071 , PRO D:93 , LEU D:95BINDING SITE FOR RESIDUE GOL C1339
09AC9SOFTWAREASP C:61 , PHE C:62 , LEU C:114 , ALA C:115 , HIS C:122 , ILE C:123 , ASP C:124 , TRP C:151 , HOH C:2011BINDING SITE FOR RESIDUE GOL C1340
10BC1SOFTWARELYS C:275 , GLY C:309 , LYS C:311 , LYS C:327BINDING SITE FOR RESIDUE GOL C1341
11BC2SOFTWAREASN D:25 , TRP D:49 , ALA D:106 , ILE D:107 , ARG D:108 , GLN D:109BINDING SITE FOR RESIDUE GOL D1340
12BC3SOFTWAREHOH D:2086BINDING SITE FOR RESIDUE GOL D1341
13BC4SOFTWARELEU C:95 , TRP D:23 , LEU D:24 , GLU D:27 , GLY D:318 , TYR D:332 , PRO D:335 , HOH D:2084BINDING SITE FOR RESIDUE GOL D1342
14BC5SOFTWAREASP D:61 , PHE D:62 , LEU D:114 , ALA D:115 , HIS D:122 , ILE D:123 , ASP D:124 , VAL D:127 , TRP D:151BINDING SITE FOR RESIDUE GOL D1343
15BC6SOFTWAREASP E:61 , PHE E:62 , VAL E:113 , LEU E:114 , ALA E:115 , HIS E:122 , ILE E:123 , ASP E:124 , VAL E:127 , ALA E:128 , TRP E:151BINDING SITE FOR RESIDUE GOL E1339
16BC7SOFTWAREASN E:25 , GLU E:29 , TRP E:49 , ASN E:57 , ILE E:107 , ARG E:108 , GLN E:109BINDING SITE FOR RESIDUE GOL E1340
17BC8SOFTWAREGLY E:309 , PHE E:310 , LYS E:311 , LYS E:327BINDING SITE FOR RESIDUE GOL E1341
18BC9SOFTWAREARG A:305 , GLN B:316 , HOH B:2038 , GLN E:289 , ALA E:290 , ASP E:291BINDING SITE FOR RESIDUE GOL E1342
19CC1SOFTWARESER C:15 , MSE F:1BINDING SITE FOR RESIDUE FOR F1338
20CC2SOFTWAREASP F:61 , PHE F:62 , LEU F:114 , HIS F:122 , ASP F:124 , VAL F:127 , TRP F:151BINDING SITE FOR RESIDUE GOL F1339
21CC3SOFTWARELYS F:275 , GLY F:309 , LYS F:311 , LYS F:327 , ASP F:328BINDING SITE FOR RESIDUE GOL F1340
22CC4SOFTWAREGLN A:293 , GLU A:331 , GLN F:289 , ALA F:290 , ASP F:291BINDING SITE FOR RESIDUE GOL F1341

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2WYL)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Phe A:17 -Pro A:18
2Trp A:323 -Pro A:324
3Phe B:17 -Pro B:18
4Trp B:323 -Pro B:324
5Phe C:17 -Pro C:18
6Trp C:323 -Pro C:324
7Phe D:17 -Pro D:18
8Trp D:323 -Pro D:324
9Phe E:17 -Pro E:18
10Trp E:323 -Pro E:324
11Phe F:17 -Pro F:18
12Trp F:323 -Pro F:324

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2WYL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2WYL)

(-) Exons   (0, 0)

(no "Exon" information available for 2WYL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:304
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:338
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330        
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylA00 A:2-338 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh......hhhhhhhhhh......eeeeeee..eeeee.....eeee.............----------------.............hhhhh....eee....hhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhh.hhh.eee.....eeee..eeeeeee....------------------......eeeeeee..eeeee........hhhhhhhhh...eeeee............hhhhhhhhhhhhh..eeeee.....hhhh..hhhhhhhhhhhh.......ee.......eeee............... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl A   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGN----------------KLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDR------------------GmDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
                            |       10        20        30        40        50        60        70  |      -        90       100       110       120       130 |     140       150       160       170       180    |    -         -   ||  210       220       230       240       250       260    |  270       280       290       300|      310       320       330        
                            |                                     40-MSE                           73               90                                       132-MSE                                              185                204|                                                    260-MSE|  |                              301-MSE                                 
                            1-MSE                                                                                                                                                                                                     205-MSE                                                     265-MSE                                                                     
                                                                                                                                                                                                                                                                                                     268-MSE                                                                  


Chain B from PDB  Type:PROTEIN  Length:302
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRG 337
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylB00 B:2-337 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh....hhhhhhhhhh......eeeee.....eeee.....eeee............------------------............hhhhh....eee....hhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhh.hhh.eee.....eeee..eeeeeee.....-----------------......eeeeeee..eeeee........hhhhhhhhh...eeeee............hhhhhhhhhhhh...eeeee.....hhhh..hhhhhhhhhhhhhhhh...ee.......eeee.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl B   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHG------------------LQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRT-----------------GmDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRG 337
                            |       10        20        30        40        50        60        70 |       -         -|      100       110       120       130 |     140       150       160       170       180     |   -         -   ||  210       220       230       240       250       260    |  270       280       290       300|      310       320       330       
                            1-MSE                                 40-MSE                          72                 91                                      132-MSE                                               186               204|                                                    260-MSE|  |                              301-MSE                                
                                                                                                                                                                                                                                      205-MSE                                                     265-MSE                                                                    
                                                                                                                                                                                                                                                                                                     268-MSE                                                                 


Chain C from PDB  Type:PROTEIN  Length:299
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRG 337
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylC00 C:2-337 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh....hhhhhhhhhh......eeeeeee..eeeee.....eeee............-------------------...........hhhhh....eee.........hhhhhhhhhhhh.....eeehhhhhhhhhhhh.hhh.eee.....eeee..eeeeeee...-------------------......eeeeee....eeee........hhhhhhhhh...eeeee............hhhhhhhhhhhh...eeeee.....hhhh..hhhhhhhhhhhh.......ee.......eeee.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl C   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHG-------------------QPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFD-------------------GmDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRG 337
                            |       10        20        30        40        50        60        70 |       -         - |     100       110       120       130 |     140       150       160       170       180   |     -         -   ||  210       220       230       240       250       260    |  270       280       290       300|      310       320       330       
                            1-MSE                                 40-MSE                          72                  92                                     132-MSE                                             184                 204|                                                    260-MSE|  |                              301-MSE                                
                                                                                                                                                                                                                                      205-MSE                                                     265-MSE                                                                    
                                                                                                                                                                                                                                                                                                     268-MSE                                                                 


Chain D from PDB  Type:PROTEIN  Length:300
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330         
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFD 339
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylD00 D:2-339 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh....hhhhhhhhhh......eeeee.....eeee.....eeee............-------------------...........hhhhh....eee.........hhhhhhhhhhhh.....eeehhhhhhhhhhh..hhh.eee.....eeee..eeeeee...--------------------hhhhh..eeeeee..eeeee........hhhhhhhhh...eeeee............hhhhhhhhhhhh...eeeee.....hhhh..hhhhhhhhhhhh.......ee.......eeee................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl D   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHG-------------------QPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAF--------------------GmDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFD 339
                            |       10        20        30        40        50        60        70 |       -         - |     100       110       120       130 |     140       150       160       170       180  |      -         -   ||  210       220       230       240       250       260    |  270       280       290       300|      310       320       330         
                            1-MSE                                 40-MSE                          72                  92                                     132-MSE                                            183                  204|                                                    260-MSE|  |                              301-MSE                                  
                                                                                                                                                                                                                                      205-MSE                                                     265-MSE                                                                      
                                                                                                                                                                                                                                                                                                     268-MSE                                                                   


Chain E from PDB  Type:PROTEIN  Length:302
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:338
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330        
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylE00 E:2-338 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh....hhhhhhhhh.......eeeeeee..eeeee.....eeee............-----------------.............hhhhh....eee.........hhhhhhhhhhhh.....eeehhhhhhhhhhhh.....eee.....eeee..eeeeeee....-------------------.....eeeeee....eeee........hhhhhhhhh...eeeee............hhhhhhhhhhhhh..eeeee.....hhhh..hhhhhhhhhhhh.......ee.......eeee............... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl E   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHG-----------------KLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDR-------------------mDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
                            |       10        20        30        40        50        60        70 |       -        90       100       110       120       130 |     140       150       160       170       180    |    -         -    |  210       220       230       240       250       260    |  270       280       290       300|      310       320       330        
                            1-MSE                                 40-MSE                          72                90                                       132-MSE                                              185                 205-MSE                                                260-MSE|  |                              301-MSE                                 
                                                                                                                                                                                                                                                                                                  265-MSE                                                                     
                                                                                                                                                                                                                                                                                                     268-MSE                                                                  


Chain F from PDB  Type:PROTEIN  Length:302
 aligned with ULAG_ECOLI | P39300 from UniProtKB/Swiss-Prot  Length:354

    Alignment length:338
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330        
           ULAG_ECOLI     1 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2wylF00 F:2-338 Metallo-beta-lactamase, chain A                                                                                                                                                                                                                                                                                                   CATH domains
           Pfam domains (1) -------------------------------------------------------Lactamase_B_2-2wy                 lF01 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------Lactamase_B_2-2wy                 lF02 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------Lactamase_B_2-2wy                 lF03 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------Lactamase_B_2-2wy                 lF04 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------------------------------Lactamase_B_2-2wy                 lF05 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------------------------------Lactamase_B_2-2wy                 lF06 F:56-282                                                                                                                                                                                    -------------------------------------------------------- Pfam domains (6)
         Sec.struct. author .hhhhhhhhhhhhhhhh....hhhhhhhhhh......eeeee.....eeee.....eeee............-----------------.............hhhhh....eee.........hhhhhhhhhhhh.....eeehhhhhhhhhhhh.hhh.eee.....eeee..eeeeee.....-------------------......eeeee....eeee.......hhhhhhhhhh...eeeee............hhhhhhhhhhhh...eeeee.....hhhh..hhhhhhhhhhhh.......ee.......eeee............... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wyl F   1 mSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAmWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHG-----------------KLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVmQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDR-------------------mDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKmTSADmLRmGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEmKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGF 338
                            |       10        20        30        40        50        60        70 |       -        90       100       110       120       130 |     140       150       160       170       180    |    -         -    |  210       220       230       240       250       260    |  270       280       290       300|      310       320       330        
                            1-MSE                                 40-MSE                          72                90                                       132-MSE                                              185                 205-MSE                                                260-MSE|  |                              301-MSE                                 
                                                                                                                                                                                                                                                                                                  265-MSE                                                                     
                                                                                                                                                                                                                                                                                                     268-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2WYL)

(-) CATH Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Clan: Metallo-HOrase (67)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (ULAG_ECOLI | P39300)
molecular function
    GO:0035460    L-ascorbate 6-phosphate lactonase activity    Catalysis of the reaction: L-ascorbate 6-phosphate + H2O = 3-keto-L-gulonate 6-phosphate.
    GO:0052689    carboxylic ester hydrolase activity    Catalysis of the hydrolysis of a carboxylic ester bond.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0030145    manganese ion binding    Interacting selectively and non-covalently with manganese (Mn) ions.
biological process
    GO:0019854    L-ascorbic acid catabolic process    The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ULAG_ECOLI | P39300: 2wym

(-) Related Entries Specified in the PDB File

2wym STRUCTURE OF A METALLO-B-LACTAMASE