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(-) Description

Title :  PT26-6P
 
Authors :  J. Keller, N. Leulliot, N. Soler, B. Collinet, R. Vincentelli, P. Forterre, H. Van Tilbeurgh
Date :  22 Feb 09  (Deposition) - 03 Mar 09  (Release) - 11 Aug 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Extra Chromosomal Elements, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Keller, N. Leulliot, N. Soler, B. Collinet, R. Vincentelli, P. Forterre, H. Van Tilbeurgh
A Protein Encoded By A New Family Of Mobile Elements From Euryarchaea Exhibits Three Domains With Novel Folds.
Protein Sci. V. 18 850 2009
PubMed-ID: 19319959  |  Reference-DOI: 10.1002/PRO.73

(-) Compounds

Molecule 1 - PT26-6P
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET30A
    Expression System Taxid: 562
    Organism Scientific: THERMOCOCCUS SP. 26-2
    Organism Taxid: 195518

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 22)

Asymmetric Unit (1, 22)
No.NameCountTypeFull Name
1MSE22Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 11)
No.NameCountTypeFull Name
1MSE11Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 11)
No.NameCountTypeFull Name
1MSE11Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2WB7)

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:333 -A:344
2B:333 -B:344

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gln A:441 -Pro A:442
2Gln B:441 -Pro B:442

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2WB7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2WB7)

(-) Exons   (0, 0)

(no "Exon" information available for 2WB7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:525
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh...hhhhhhhhhhhhhhhh...eeeeee.......eeeeeee..ee....eeeeeeeee.........eeeeeeeeeeee....eeeeeeee.hhh.......eeeeeeeee.....hhhhhhhhhhhh..hhhhhhhhhhh....eeeeeeeeeeeeeeee.....hhhhh....eee..eeeeeeeeeeeeeeee..hhhh.ee.hhhhh..........hhhhhhhhhhh...eee.eeeee....eeeeeee........ee...eeeee..........eeeeeeeeeeeeee.........eeeeeeee....eee...ee......eeeeeeeeeeeeeee.....eeeeeeeeee.............hhhhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wb7 A 146 mNATINDDDIDDVKKALDHATQAAHKAAAELTAKLRSDFVEYGNGGTAGQVLIHIYGPGLIYGFSAFPVQIRLEIPNQPVPFNKVHITEVTAYVIDENNRTYWTRVWNSSTFRQGGYIADTLDLVTVmKAPDPLVYQIRDAIVTGQISRELYDKIWNTSTTHFEIRVIVKGYQEAWKTDSSVSNQSSCPSDGHWYEDACWVHDKDIDFTLKAETTTAWGHVTGTNDVATIDGGmLGSLPIKFLQSLDLSGKWVLYQNKYAGALSDFIIITAASPVHVLNSTAmYKFLITPNPGYFQPANPKISDEYRFVTLRVIEGGRmELADTTTGHIGDLTEPTFFGLTAHYTDAPGTLDYHALGLVYAYVERDDGVKIPIWLAAEPmISVLSNTYTVmKDQDVKNLIDLYKKKDREKINATTKAmINSLQEKIDEAEQLLAKAKGmNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQmFLNYLNAAKKHEmAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKEYEP 670
                            |      155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375   |   385       395       405       415       425  |    435       445       455       465       475       485       495       505       515       525       535|      545       555       565       575       585       595       605       615  |    625     | 635       645       655       665     
                            |                                                                                                                            273-MSE                                                                                                   379-MSE                                          428-MSE                             464-MSE                                                      525-MSE    536-MSE                    563-MSE              584-MSE                           618-MSE      631-MSE                                   
                          146-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        


Chain B from PDB  Type:PROTEIN  Length:525
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh....hhhhhhhhhhhhhhh....eeeeeeee.....eeeeeee..ee....eeeeeeeee.........eeeeeeeeeeee....eeeeeeee.hhh.......eeeeeeeee.....hhhhhhhhhhhh..hhhhhhhhhhh....eeeeeeeeeeeeeeee.....hhhhh....eee..eeeeeeeeeeeeeeee..hhhh.ee.hhhhh............hhhhhh......eee.eeeee....eeeeeee........ee...eeeee..........eeeeeeeeeeeeee.........eeeeeeee....eee...ee......eeeeeeeeeeeeeee.....eeeeeeeeee.............hhhhhhhhhhhh..hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wb7 B 146 mNATINDDDIDDVKKALDHATQAAHKAAAELTAKLRSDFVEYGNGGTAGQVLIHIYGPGLIYGFSAFPVQIRLEIPNQPVPFNKVHITEVTAYVIDENNRTYWTRVWNSSTFRQGGYIADTLDLVTVmKAPDPLVYQIRDAIVTGQISRELYDKIWNTSTTHFEIRVIVKGYQEAWKTDSSVSNQSSCPSDGHWYEDACWVHDKDIDFTLKAETTTAWGHVTGTNDVATIDGGmLGSLPIKFLQSLDLSGKWVLYQNKYAGALSDFIIITAASPVHVLNSTAmYKFLITPNPGYFQPANPKISDEYRFVTLRVIEGGRmELADTTTGHIGDLTEPTFFGLTAHYTDAPGTLDYHALGLVYAYVERDDGVKIPIWLAAEPmISVLSNTYTVmKDQDVKNLIDLYKKKDREKINATTKAmINSLQEKIDEAEQLLAKAKGmNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQmFLNYLNAAKKHEmAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKEYEP 670
                            |      155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375   |   385       395       405       415       425  |    435       445       455       465       475       485       495       505       515       525       535|      545       555       565       575       585       595       605       615  |    625     | 635       645       655       665     
                          146-MSE                                                                                                                        273-MSE                                                                                                   379-MSE                                          428-MSE                             464-MSE                                                      525-MSE    536-MSE                    563-MSE              584-MSE                           618-MSE      631-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2WB7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2WB7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2WB7)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2WB7)

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  Cis Peptide Bonds
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  2wb7
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 Related Entries

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(-) Related Entries Specified in the PDB File

2wb6 CRYSTAL STRUCTURE OF AFV1-102, A PROTEIN FROM THE ACIDIANUS FILAMENTOUS VIRUS 1