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(-) Description

Title :  CRYSTAL STRUCTURE OF AFV1-102, A PROTEIN FROM THE ACIDIANUS FILAMENTOUS VIRUS 1
 
Authors :  J. Keller, N. Leulliot, B. Collinet, V. Campanacci, C. Cambillau, D. Pranghisvilli, H. Van Tilbeurgh
Date :  22 Feb 09  (Deposition) - 03 Mar 09  (Release) - 11 Aug 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Archaeal Virus, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Keller, N. Leulliot, B. Collinet, V. Campanacci, C. Cambillau, D. Pranghisvilli, H. Van Tilbeurgh
Crystal Structure Of Afv1-102, A Protein From The Acidianus Filamentous Virus 1.
Protein Sci. V. 18 845 2009
PubMed-ID: 19319936  |  Reference-DOI: 10.1002/PRO.79

(-) Compounds

Molecule 1 - AFV1-102
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: GATEWAY
    Expression System Taxid: 562
    Fragment: RESIDUES 2-102
    Organism Scientific: ACIDIANUS FILAMENTOUS VIRUS 1
    Organism Taxid: 235266

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:34BINDING SITE FOR RESIDUE CL A1001
2AC2SOFTWAREARG A:75BINDING SITE FOR RESIDUE CL A1002

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:56 -A:62

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:114
 aligned with Y102_AFV1Y | Q70LC3 from UniProtKB/Swiss-Prot  Length:102

    Alignment length:114
                                              1                                                                                               
                                     -        |2        12        22        32        42        52        62        72        82        92    
           Y102_AFV1Y     - ------------------MIVDKNKIVIPMSEFLDSMFLVIEKLGVHAEKKGSMIFLSSERVKLADWKQLGAMCSDCYHCKLPLSSFIEIVTRKAKDKFLVMYNEKEVTLVARG  96
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhh...hhhhhhhhee...eeeeehhhhhhhhhhhhhh..eeeeee..eeeeee....hhhhhhh..eeee..eeeeehhhhhhhhhhhhhh.eeeee...eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 2wb6 A -19 LESTSLYKKAGSENLYFQGIVDKNKIVIPMSEFLDSMFLVIEKLGVHAEKKGSMIFLSSERVKLADWKQLGAMCSDCYHCKLPLSSFIEIVTRKAKDKFLVMYNEKEVTLVARG  96
                                   -10        |2        12        22        32        42        52        62        72        82        92    
                                             -1|                                                                                              
                                               2
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  2wb6
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(-) Related Entries Specified in the PDB File

2wb7 PT26-6P