Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE (E232Q VARIANT) FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH HYPOXANTHINE
 
Authors :  J. A. Doebbler, J. J. Truglio, S. Leimkuhler, C. Kisker
Date :  04 Dec 08  (Deposition) - 23 Dec 08  (Release) - 22 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Xdh, Gout, Iron, Xanthine, Iron-Sulfur, Molybdenum Cofactor, Hypoxanthine, Metal-Binding, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. Dietzel, J. Kuper, J. A. Doebbler, A. Schulte, J. J. Truglio, S. Leimkuhler, C. Kisker
Mechanism Of Substrate And Inhibitor Binding Of Rhodobacter Capsulatus Xanthine Dehydrogenase.
J. Biol. Chem. V. 284 8768 2009
PubMed-ID: 19109249  |  Reference-DOI: 10.1074/JBC.M808114200

(-) Compounds

Molecule 1 - XANTHINE DEHYDROGENASE
    Chains: A, C, E, G
    EC Number: 1.1.1.204
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSL207
    Expression System Strain: TP1000
    Expression System Taxid: 562
    Organism Scientific: RHODOBACTER CAPSULATUS
    Organism Taxid: 1061
 
Molecule 2 - XANTHINE DEHYDROGENASE
    Chains: B, D, F, H
    EC Number: 1.1.1.204
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSL207
    Expression System Strain: TP1000
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: RHODOBACTER CAPSULATUS
    Organism Taxid: 1061

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 24)

Asymmetric Unit (5, 24)
No.NameCountTypeFull Name
1BA4Ligand/IonBARIUM ION
2FAD4Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES8Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HPA4Ligand/IonHYPOXANTHINE
5XAX4Ligand/Ion{[(5AR,8R,9AR)-2-AMINO-4-OXO-6,7-DI(SULFANYL-KAPPAS)-3,5,5A,8,9A,10-HEXAHYDRO-4H-PYRANO[3,2-G]PTERIDIN-8-YL]METHYL DIHYDROGENATO(2-)PHOSPHATE}(HYDROXY)OXO(THIOXO)MOLYBDENUM
Biological Unit 1 (4, 5)
No.NameCountTypeFull Name
1BA-1Ligand/IonBARIUM ION
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HPA1Ligand/IonHYPOXANTHINE
5XAX1Ligand/Ion{[(5AR,8R,9AR)-2-AMINO-4-OXO-6,7-DI(SULFANYL-KAPPAS)-3,5,5A,8,9A,10-HEXAHYDRO-4H-PYRANO[3,2-G]PTERIDIN-8-YL]METHYL DIHYDROGENATO(2-)PHOSPHATE}(HYDROXY)OXO(THIOXO)MOLYBDENUM
Biological Unit 2 (4, 5)
No.NameCountTypeFull Name
1BA-1Ligand/IonBARIUM ION
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HPA1Ligand/IonHYPOXANTHINE
5XAX1Ligand/Ion{[(5AR,8R,9AR)-2-AMINO-4-OXO-6,7-DI(SULFANYL-KAPPAS)-3,5,5A,8,9A,10-HEXAHYDRO-4H-PYRANO[3,2-G]PTERIDIN-8-YL]METHYL DIHYDROGENATO(2-)PHOSPHATE}(HYDROXY)OXO(THIOXO)MOLYBDENUM
Biological Unit 3 (4, 5)
No.NameCountTypeFull Name
1BA-1Ligand/IonBARIUM ION
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HPA1Ligand/IonHYPOXANTHINE
5XAX1Ligand/Ion{[(5AR,8R,9AR)-2-AMINO-4-OXO-6,7-DI(SULFANYL-KAPPAS)-3,5,5A,8,9A,10-HEXAHYDRO-4H-PYRANO[3,2-G]PTERIDIN-8-YL]METHYL DIHYDROGENATO(2-)PHOSPHATE}(HYDROXY)OXO(THIOXO)MOLYBDENUM
Biological Unit 4 (4, 5)
No.NameCountTypeFull Name
1BA-1Ligand/IonBARIUM ION
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HPA1Ligand/IonHYPOXANTHINE
5XAX1Ligand/Ion{[(5AR,8R,9AR)-2-AMINO-4-OXO-6,7-DI(SULFANYL-KAPPAS)-3,5,5A,8,9A,10-HEXAHYDRO-4H-PYRANO[3,2-G]PTERIDIN-8-YL]METHYL DIHYDROGENATO(2-)PHOSPHATE}(HYDROXY)OXO(THIOXO)MOLYBDENUM

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLN A:102 , CYS A:103 , GLY A:104 , CYS A:106 , CYS A:134 , CYS A:136 , LEU B:176BINDING SITE FOR RESIDUE FES A1463
02AC2SOFTWAREGLY A:38 , CYS A:39 , ASN A:40 , GLY A:42 , CYS A:44 , GLY A:45 , CYS A:47 , CYS A:63BINDING SITE FOR RESIDUE FES A1464
03AC3SOFTWAREGLN A:102 , CYS A:136 , GLN B:197 , GLY B:226 , GLY B:227 , PHE B:228 , GLY B:229 , GLN B:232 , PHE B:341 , ARG B:342 , MET B:488 , GLY B:489 , GLN B:490 , LEU B:492 , ALA B:528 , ALA B:529 , SER B:530 , GLY B:532 , ALA B:533 , GLN B:663 , GLY B:729 , GLU B:730 , HPA B:1780BINDING SITE FOR RESIDUE XAX B1778
04AC4SOFTWAREGLU A:41 , GLY A:42 , ASP A:43 , LEU A:201 , ALA A:203 , GLY A:204 , GLY A:205 , THR A:206 , ASP A:207 , VAL A:208 , LEU A:225 , PHE A:270 , ALA A:271 , ALA A:279 , THR A:280 , GLY A:283 , ASN A:284 , ALA A:286 , ASN A:287 , GLY A:292 , ASP A:293 , ARG A:330 , PHE A:335 , VAL A:336 , LYS A:352 , GLN A:359BINDING SITE FOR RESIDUE FAD A1465
05AC5SOFTWAREGLU B:172 , HIS B:173 , TYR B:175 , THR B:266 , GLY B:267BINDING SITE FOR RESIDUE BA B1779
06AC6SOFTWAREGLN C:102 , CYS C:103 , GLY C:104 , CYS C:106 , CYS C:134 , ARG C:135 , CYS C:136 , LEU D:176BINDING SITE FOR RESIDUE FES C1463
07AC7SOFTWAREGLY C:38 , CYS C:39 , ASN C:40 , GLY C:42 , CYS C:44 , GLY C:45 , ALA C:46 , CYS C:47 , CYS C:63BINDING SITE FOR RESIDUE FES C1464
08AC8SOFTWAREGLN C:102 , CYS C:136 , GLN D:197 , GLY D:227 , PHE D:228 , GLY D:229 , GLN D:232 , PHE D:341 , ARG D:342 , MET D:488 , GLY D:489 , GLN D:490 , ALA D:528 , ALA D:529 , SER D:530 , SER D:531 , GLY D:532 , ALA D:533 , GLN D:663 , GLY D:729 , GLU D:730 , HPA D:1780BINDING SITE FOR RESIDUE XAX D1778
09AC9SOFTWAREGLU C:41 , GLY C:42 , ASP C:43 , LEU C:201 , ALA C:203 , GLY C:204 , GLY C:205 , THR C:206 , ASP C:207 , VAL C:208 , TRP C:211 , LEU C:225 , PHE C:270 , ALA C:271 , VAL C:275 , ALA C:279 , THR C:280 , GLY C:283 , ASN C:284 , ALA C:286 , ASN C:287 , GLY C:292 , ASP C:293 , ARG C:330 , PHE C:335 , VAL C:336 , LYS C:352 , GLN C:359BINDING SITE FOR RESIDUE FAD C1465
10BC1SOFTWAREGLU D:172 , HIS D:173 , TYR D:175 , THR D:266 , GLY D:267BINDING SITE FOR RESIDUE BA D1779
11BC2SOFTWAREGLN E:102 , CYS E:103 , CYS E:106 , CYS E:134 , CYS E:136BINDING SITE FOR RESIDUE FES E1463
12BC3SOFTWAREGLY E:38 , CYS E:39 , ASN E:40 , GLY E:42 , CYS E:44 , GLY E:45 , ALA E:46 , CYS E:47 , CYS E:63BINDING SITE FOR RESIDUE FES E1464
13BC4SOFTWAREGLN E:102 , CYS E:136 , GLN F:197 , GLY F:227 , PHE F:228 , GLY F:229 , GLN F:232 , PHE F:341 , ARG F:342 , MET F:488 , GLY F:489 , GLN F:490 , ALA F:528 , ALA F:529 , SER F:530 , SER F:531 , GLY F:532 , ALA F:533 , GLN F:663 , GLY F:729 , GLU F:730 , HPA F:1780BINDING SITE FOR RESIDUE XAX F1778
14BC5SOFTWAREGLU E:41 , GLY E:42 , ASP E:43 , LEU E:201 , ALA E:203 , GLY E:204 , GLY E:205 , THR E:206 , ASP E:207 , VAL E:208 , TRP E:211 , LEU E:225 , PHE E:270 , ALA E:271 , ALA E:279 , THR E:280 , GLY E:283 , ASN E:284 , ALA E:286 , GLY E:292 , ASP E:293 , ARG E:330 , VAL E:336 , LYS E:352 , GLN E:359BINDING SITE FOR RESIDUE FAD E1465
15BC6SOFTWAREGLU F:172 , HIS F:173 , TYR F:175 , THR F:266 , GLY F:267BINDING SITE FOR RESIDUE BA F1779
16BC7SOFTWARECYS G:103 , GLY G:104 , CYS G:106 , CYS G:134 , CYS G:136 , LEU H:176BINDING SITE FOR RESIDUE FES G1463
17BC8SOFTWAREGLY G:38 , CYS G:39 , GLY G:42 , ASP G:43 , CYS G:44 , GLY G:45 , CYS G:47 , CYS G:63BINDING SITE FOR RESIDUE FES G1464
18BC9SOFTWAREGLN G:102 , CYS G:136 , GLN H:197 , GLY H:226 , GLY H:227 , PHE H:228 , GLY H:229 , GLN H:232 , PHE H:341 , ARG H:342 , MET H:488 , GLY H:489 , GLN H:490 , LEU H:492 , THR H:527 , ALA H:528 , ALA H:529 , SER H:530 , GLY H:532 , ALA H:533 , GLN H:663 , GLY H:729 , GLU H:730 , HPA H:1780BINDING SITE FOR RESIDUE XAX H1778
19CC1SOFTWAREGLU G:41 , GLY G:42 , LEU G:201 , ALA G:203 , GLY G:204 , GLY G:205 , THR G:206 , ASP G:207 , VAL G:208 , LEU G:225 , PHE G:270 , ALA G:271 , VAL G:278 , ALA G:279 , THR G:280 , GLY G:283 , ASN G:284 , ALA G:286 , ASN G:287 , GLY G:292 , ASP G:293 , ARG G:330 , VAL G:336 , LYS G:352 , GLN G:359BINDING SITE FOR RESIDUE FAD G1465
20CC2SOFTWAREGLU H:172 , HIS H:173 , TYR H:175 , THR H:266 , GLY H:267BINDING SITE FOR RESIDUE BA H1779
21CC3SOFTWAREGLN B:232 , PRO B:306 , ARG B:310 , PHE B:344 , PHE B:459 , THR B:460 , ALA B:528 , ALA B:529 , XAX B:1778BINDING SITE FOR RESIDUE HPA B1780
22CC4SOFTWAREGLN D:232 , ARG D:310 , PHE D:344 , PHE D:459 , THR D:460 , LEU D:461 , ALA D:528 , ALA D:529 , XAX D:1778BINDING SITE FOR RESIDUE HPA D1780
23CC5SOFTWAREGLN F:232 , ARG F:310 , PHE F:344 , THR F:460 , LEU F:461 , ALA F:528 , ALA F:529 , XAX F:1778BINDING SITE FOR RESIDUE HPA F1780
24CC6SOFTWAREGLN H:232 , ARG H:310 , PHE H:344 , PHE H:459 , THR H:460 , LEU H:461 , ALA H:528 , ALA H:529 , XAX H:1778BINDING SITE FOR RESIDUE HPA H1780

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2W55)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Ala B:759 -Pro B:760
2Ala D:759 -Pro D:760
3Ala F:759 -Pro F:760
4Ala H:759 -Pro H:760

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2W55)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2W55)

(-) Exons   (0, 0)

(no "Exon" information available for 2W55)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:450
 aligned with O54050_RHOCA | O54050 from UniProtKB/TrEMBL  Length:462

    Alignment length:462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
         O54050_RHOCA     1 MEIAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLAQLSSGVRGQTAPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2w55A01 A:1-80  [code=3.10.20.30, no name defined]                              2w55A02 A:81-166  [code=1.10.150.120, no name defined]                                --------------2w55A03 A:181-230                                 2w55A04 A:231-344  [code=3.30.465.10, no name defined]                                                            ----2w55A05 A:349-452  [code=3.30.390.50, no name defined]                                                  ---------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..eeeeee......hhhhhhhhhh................eeeee....eeeee.....hhhh...eeehhhhh.......hhhhhhhhhh.......hhhhhhhhhhhhhhh...hhhhhh.........hhhhhhhhhhhhh...hhhhhhhhhh..------------......hhhhhhhhhh.....eee.....hhhhhhh.......eee.........eeee..eeeee...hhhhhhhhhh..hhhhhhhhhh..hhhhhh..hhhhhhhhh....hhhhhhhhh..eeeee........hhhhheee..ee......eeeeeeee.....eeeeee..........eeeeeeeee....eeee..eee......eehhhhhhhhh....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2w55 A   1 MEIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTL------------PAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160     |   -       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
                                                                                                                                                                                               166          179                                                                                                                                                                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:760
 aligned with O54051_RHOCA | O54051 from UniProtKB/TrEMBL  Length:777

    Alignment length:776
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
         O54051_RHOCA     2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRGAEGRA 777
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhh....hhhhh......eeeeeee.....eeeeeeehhhhhhh..eeeeehhhhh...................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhhh........eeeee.hhhhhhhh..eeeeeeeee...........eeeee.....eeeee...hhhhhhhhhhhhhh.hhh.eeeee.......hhhhh.hhhhhhhhhhhhhhhh..eeee.hhhhhhhhh.....eeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh.........eeeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhhhhhhh.......----------------...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee...hhhh.eeeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eee..ee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhheee..eeee..eeeehhhhhhhhhhh....eeeeeee....eee....eee...eeeeeeeeeeeeee.....eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhh.......................hhhhh..eeeeeee.......hhhh.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w55 B   2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQSQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPE----------------KKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRRAEGRA 777
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381         -      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
                                                                                                                                                                                                                                                                                                                                                                                                                     381              398                                                                                                                                                                                                                                                                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:450
 aligned with O54050_RHOCA | O54050 from UniProtKB/TrEMBL  Length:462

    Alignment length:462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
         O54050_RHOCA     1 MEIAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLAQLSSGVRGQTAPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2w55C01 C:1-80  [code=3.10.20.30, no name defined]                              2w55C02 C:81-166  [code=1.10.150.120, no name defined]                                --------------2w55C03 C:181-230                                 2w55C04 C:231-344  [code=3.30.465.10, no name defined]                                                            ----2w55C05 C:349-452  [code=3.30.390.50, no name defined]                                                  ---------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..eeeeee......hhhhhhhhhh................eeeee.....eeee.....hhhh...eeehhhhh.......hhhhhhhhhh.......hhhhhhhhhhhhhhh...hhhhhh.........hhhhhhhhhhhh....hhhhhhhhhh..------------......hhhhhhhhhhhh...eee.....hhhhhh........eee...hhhhh.eee...eeeee...hhhhhhhhhh..hhhhhhhhhh..hhhhhh..hhhhhhhhh....hhhhhhhhhh.eeeee....eeeee....eee..ee......eeeeeeee.....eeeeee..........eeeeeeeeee..eeeeeeeeee......eehhhhhhhhh....hhhhhhhhh.hhhhhh........hhhhhhhhhhhhhhhhhhhhhh...hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2w55 C   1 MEIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTL------------PAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160     |   -       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
                                                                                                                                                                                               166          179                                                                                                                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:760
 aligned with O54051_RHOCA | O54051 from UniProtKB/TrEMBL  Length:777

    Alignment length:776
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
         O54051_RHOCA     2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRGAEGRA 777
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhh...............eeeeeee.....eeeeeeehhhhhhh..eeeee........................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhhh........eeeee.hhhhhhhh..eeeeeeeee...........eeeeeee..eeeeee...hhhhhhhhhhhhhh.hhh.eeeee............hhhhhhhhhhhhhhhhh..eeee.hhhhhhhhh.....eeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh........eeeeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.....----------------...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee...hhhh.eeeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eee..ee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhheee..eeee..ee.hhhhhhhhhhhh....eeeeeee....eee....eee...eeeeeeeeeeeeee.....eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhh........................hhhhh..eeeeeee.......hhhh.....hhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w55 D   2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQSQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPE----------------KKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRRAEGRA 777
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381         -      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
                                                                                                                                                                                                                                                                                                                                                                                                                     381              398                                                                                                                                                                                                                                                                                                                                                                                           


Chain E from PDB  Type:PROTEIN  Length:450
 aligned with O54050_RHOCA | O54050 from UniProtKB/TrEMBL  Length:462

    Alignment length:462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
         O54050_RHOCA     1 MEIAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLAQLSSGVRGQTAPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2w55E01 E:1-80  [code=3.10.20.30, no name defined]                              2w55E02 E:81-166  [code=1.10.150.120, no name defined]                                --------------2w55E03 E:181-230                                 2w55E04 E:231-344  [code=3.30.465.10, no name defined]                                                            ----2w55E05 E:349-452  [code=3.30.390.50, no name defined]                                                  ---------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..eeeeee......hhhhhhhhhh................eeeee....eeeee.....hhhh...eeehhhhh.......hhhhhhhhhh.......hhhhhhhhhhhhhhh...hhhhhh.........hhhhhhhhhhhh....hhhhhhhhhh..------------......hhhhhhhhhhhh...eee......hhhhhh.......eee...hhhhh.eee...eeeee...hhhhhhhhhh..hhhhhhhhh...hhhhhh..hhhhhhhhh....hhhhhhhhh..eeeeee..eeeeee.hhh.............eeeeeeee......eeeee..........eeeeeeeeee..eeeeeeeeee......eehhhhhhhhh....hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2w55 E   1 MEIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTL------------PAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160     |   -       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
                                                                                                                                                                                               166          179                                                                                                                                                                                                                                                                                           


Chain F from PDB  Type:PROTEIN  Length:760
 aligned with O54051_RHOCA | O54051 from UniProtKB/TrEMBL  Length:777

    Alignment length:776
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
         O54051_RHOCA     2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRGAEGRA 777
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhh..............eeeeeee.....eeeeeeehhhhhhh....eeehhhhh...................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhhh........eeeee.hhhhhhhh..eeeeeeee............eeeeeee..eeeeeee..hhhhhhhhhhhhhh.hhh.eeeee.............hhhhhhhhhhhhhhhh..eeee.hhhhhhhhh.....eeeeeeeee.....eeeeeeeeeeeee....hhhhhhhhhhhh.........eeeeeeeee............hhhhhhhhhhhhhhhhhhhh...hhhhhh........----------------...............hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeeeeee...hhhh.eeeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eee..ee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhheee..eeee..ee.hhhhhhhhhhhh....eeeeeee....eee....eee...eeeeeeeeeeeeee.....eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhh........................hhhhh...eeeeee.......hhhh.....hhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w55 F   2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQSQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPE----------------KKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRRAEGRA 777
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381         -      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
                                                                                                                                                                                                                                                                                                                                                                                                                     381              398                                                                                                                                                                                                                                                                                                                                                                                           


Chain G from PDB  Type:PROTEIN  Length:450
 aligned with O54050_RHOCA | O54050 from UniProtKB/TrEMBL  Length:462

    Alignment length:462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
         O54050_RHOCA     1 MEIAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLAQLSSGVRGQTAPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2w55G01 G:1-80  [code=3.10.20.30, no name defined]                              2w55G02 G:81-166  [code=1.10.150.120, no name defined]                                --------------2w55G03 G:181-230                                 2w55G04 G:231-344  [code=3.30.465.10, no name defined]                                                            ----2w55G05 G:349-452  [code=3.30.390.50, no name defined]                                                  ---------- CATH domains
           Pfam domains (1) ----Fer2-2w55G05 G:5-68                                             --------Fer2_2-2w55G09 G:77-148                                                 ------------------------------FAD_binding_5-2w55G01 G:179-344                                                                                                                                       ----CO_deh_flav_C-2w55G13 G:349-450                                                                       ------------ Pfam domains (1)
           Pfam domains (2) ----Fer2-2w55G06 G:5-68                                             --------Fer2_2-2w55G10 G:77-148                                                 ------------------------------FAD_binding_5-2w55G02 G:179-344                                                                                                                                       ----CO_deh_flav_C-2w55G14 G:349-450                                                                       ------------ Pfam domains (2)
           Pfam domains (3) ----Fer2-2w55G07 G:5-68                                             --------Fer2_2-2w55G11 G:77-148                                                 ------------------------------FAD_binding_5-2w55G03 G:179-344                                                                                                                                       ----CO_deh_flav_C-2w55G15 G:349-450                                                                       ------------ Pfam domains (3)
           Pfam domains (4) ----Fer2-2w55G08 G:5-68                                             --------Fer2_2-2w55G12 G:77-148                                                 ------------------------------FAD_binding_5-2w55G04 G:179-344                                                                                                                                       ----CO_deh_flav_C-2w55G16 G:349-450                                                                       ------------ Pfam domains (4)
         Sec.struct. author .eeeeee..eeeeee......hhhhhhhhhh................eeee......eeee.....hhhh...ee.hhhhh.......hhhhhhhhhh.......hhhhhhhhhhhhhhh...hhhhhh.........hhhhhhhhhhhhh...hhhhhhhhh...------------......hhhhhhhhhh.....eee...................eee.hhh.....eee....eeee...hhhhhhhhhh..hhhhhhhhhh..hhhhhh..hhhhhhhhh....hhhhhhhhh..eeeee....eeeeehhhhh............eeeeeee......eeeeee..........eeeeee..ee..ee...eeeee......eehhhhhhhhh....hhhhhhhhh.hhhhhh........hhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2w55 G   1 MEIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTL------------PAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP 462
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160     |   -       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460  
                                                                                                                                                                                               166          179                                                                                                                                                                                                                                                                                           


Chain H from PDB  Type:PROTEIN  Length:760
 aligned with O54051_RHOCA | O54051 from UniProtKB/TrEMBL  Length:777

    Alignment length:776
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
         O54051_RHOCA     2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRGAEGRA 777
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------Ald_Xan_dh_C-2w55H05 H:17-124                                                                               -------Ald_Xan_dh_C2-2w55H01 H:132-705                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ------------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) ---------------Ald_Xan_dh_C-2w55H06 H:17-124                                                                               -------Ald_Xan_dh_C2-2w55H02 H:132-705                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ------------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) ---------------Ald_Xan_dh_C-2w55H07 H:17-124                                                                               -------Ald_Xan_dh_C2-2w55H03 H:132-705                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ------------------------------------------------------------------------ Pfam domains (3)
           Pfam domains (4) ---------------Ald_Xan_dh_C-2w55H08 H:17-124                                                                               -------Ald_Xan_dh_C2-2w55H04 H:132-705                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ------------------------------------------------------------------------ Pfam domains (4)
         Sec.struct. author .........hhhhhhh...............eeeeeee.....eeeeeeehhhhhh...eeeee........................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhhh........eeeee.hhhhhhhh..eeeeeeeee...........eeeee.....eeeee...hhhhhhhhhhhhhh.hhh.eeeee.......hhhhh.hhhhhhhhhhhhhhhh..eeee.hhhhhhhhh.....eeeeeeeee.....eeeeeeeeeeeee....hhhhhhhhhhhh.........eeeeeeeee............hhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.......----------------...............hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeeeeee...hhhh.eeeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eee..ee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhheee..eeee..eeeehhhhhhhhhhh....eeeeeee....eee....eee...eeeeeeeeeeeeee.....eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhh.......................hhhhh..eeeeeee.......hhhh.....hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2w55 H   2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAAHLAEGCFEIGGQEHFYLEGQAALALPAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQSQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPE----------------KKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWPDLQAPATPEAVLAAVRRAEGRA 777
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381         -      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771      
                                                                                                                                                                                                                                                                                                                                                                                                                     381              398
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2W55)

(-) CATH Domains  (5, 20)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (6, 24)

Asymmetric Unit
(-)
Clan: FAD_PCMH (53)
(-)
Clan: Fer2 (69)
(-)
Clan: no clan defined [family: Ald_Xan_dh_C2] (24)
(-)
Clan: no clan defined [family: Ald_Xan_dh_C] (24)
(-)
Clan: no clan defined [family: CO_deh_flav_C] (22)

(-) Gene Ontology  (13, 16)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (O54050_RHOCA | O54050)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016614    oxidoreductase activity, acting on CH-OH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
    GO:0004854    xanthine dehydrogenase activity    Catalysis of the reaction: xanthine + NAD+ + H2O = urate + NADH + H+.
    GO:0004855    xanthine oxidase activity    Catalysis of the reaction: xanthine + H2O + O2 = urate + hydrogen peroxide.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,D,F,H   (O54051_RHOCA | O54051)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FES  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    HPA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    XAX  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ala B:759 - Pro B:760   [ RasMol ]  
    Ala D:759 - Pro D:760   [ RasMol ]  
    Ala F:759 - Pro F:760   [ RasMol ]  
    Ala H:759 - Pro H:760   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2w55
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  O54050_RHOCA | O54050
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
  O54051_RHOCA | O54051
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  1.1.1.204
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  O54050_RHOCA | O54050
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  O54051_RHOCA | O54051
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O54050_RHOCA | O54050: 1jro 1jrp 2w3r 2w3s 2w54
        O54051_RHOCA | O54051: 1jro 1jrp 2w3r 2w3s 2w54

(-) Related Entries Specified in the PDB File

1jro CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE FROMRHODOBACTER CAPSULATUS
1jrp CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE INHIBITED BYALLOXANTHINE FROM RHODOBACTER CAPSULATUS
2w3r CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE ( DESULFO FORM) FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH HYPOXANTHINE
2w3s CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE ( DESULFO FORM) FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH XANTHINE
2w54 CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH BOUND INHIBITOR PTERIN-6-ALDEHYDE