2VYA - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF FATTY ACID AMIDE HYDROLASE CONJUGATED WITH THE DRUG-LIKE INHIBITOR PF-750

Authors :   M. Mileni, D. S. Johnson, Z. Wang, D. S. Everdeen, M. Liimatta, B. Pabst, K. Bhattacharya, R. A. Nugent, S. Kamtekar, B. F. Cravatt, K. Ahn, R. C.

Date :   22 Jul 08 (Deposition) - 09 Sep 08 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.75

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (1x)

Keywords :   Hydrolase, Fatty Acid Amide Hydrolyse, Golgi Apparatus, Endoplasmic Reticulum, Inhibitor, Drug- Like, Transmembrane, Faah, Chimera, Membrane, Covalent, Humanized (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Mileni, D. S. Johnson, Z. Wang, D. S. Everdeen, M. Liimatta, B. Pabst K. Bhattacharya, R. A. Nugent, S. Kamtekar, B. F. Cravatt, K. Ahn, R. C. Stevens
Structure-Guided Inhibitor Design For Human Faah By Interspecies Active Site Conversion.
Proc. Natl. Acad. Sci. Usa V. 105 12820 2008
PubMed-ID: 18753625 | Reference-DOI: 10.1073/PNAS.0806121105

Molecule 1 - FATTY-ACID AMIDE HYDROLASE 1
	Chains	:	A, B
	EC Number	:	3.5.1.4
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Variant	:	A.I.
	Expression System Vector	:	PET28A
	Fragment	:	RESIDUES 32-579
	Mutation	:	YES
	Organism Common	:	RAT
	Organism Scientific	:	RATTUS NORVEGICUS
	Organism Taxid	:	10116
	Other Details	:	S241 IS CARBAMYLATED TO 4-(QUINOLIN-3- YLMETHYL)PIPERIDINE-1-CARBALDEHYDE CHEMICAL FORMULA, C16H18N2O
	Synonym	:	FATTY ACID AMIDE HYDROLASE, OLEAMIDE HYDROLASE 1, ANANDAMIDE AMIDOHYDROLASE 1

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 7)

No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	PF7	2	Ligand/Ion	4-(QUINOLIN-3-YLMETHYL)PIPERIDINE-1-CARBOXYLIC ACID
3	UNX	4	Ligand/Ion	UNKNOWN ATOM OR ION

Biological Unit 1 (2, 6)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	PF7	2	Ligand/Ion	4-(QUINOLIN-3-YLMETHYL)PIPERIDINE-1-CARBOXYLIC ACID
3	UNX	4	Ligand/Ion	UNKNOWN ATOM OR ION

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASN A:259 , ASN B:259	BINDING SITE FOR RESIDUE CL B1577
2	AC2	SOFTWARE	MET A:191 , PHE A:192 , SER A:193 , TYR A:194 , ILE A:238 , GLY A:239 , GLY A:240 , SER A:241 , THR A:377 , PHE A:381 , PHE A:432 , MET A:436 , THR A:488 , VAL A:491	BINDING SITE FOR RESIDUE PF7 A1578
3	AC3	SOFTWARE	MET B:191 , PHE B:192 , SER B:193 , TYR B:194 , ILE B:238 , GLY B:239 , GLY B:240 , SER B:241 , THR B:377 , PHE B:381 , PHE B:432	BINDING SITE FOR RESIDUE PF7 B1578

(no "SS Bond" information available for 2VYA)

Asymmetric Unit

No.	Residues
1	Gly A:216	-	Ser A:217
2	Gly A:476	-	Pro A:477
3	Gly B:216	-	Ser B:217
4	Gly B:476	-	Pro B:477

(no "SAP(SNP)/Variant" information available for 2VYA)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	AMIDASES	PS00571	Amidases signature.	FAAH1_RAT	215-246	2	A:215-246 B:215-246

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	AMIDASES	PS00571	Amidases signature.	FAAH1_RAT	215-246	2	A:215-246 B:215-246

Asymmetric Unit (15, 30)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENSRNOT00000015961	1a	ENSRNOE00000225920	chr5:136310965-136311220	256	FAAH1_RAT	1-65	65	2	A:33-65 B:34-65	33 32
1.2	ENSRNOT00000015961	2	ENSRNOE00000103673	chr5:136318583-136318696	114	FAAH1_RAT	66-103	38	2	A:66-103 B:66-103	38 38
1.3	ENSRNOT00000015961	3	ENSRNOE00000103796	chr5:136321039-136321173	135	FAAH1_RAT	104-148	45	2	A:104-148 B:104-148	45 45
1.4	ENSRNOT00000015961	4	ENSRNOE00000103928	chr5:136321369-136321502	134	FAAH1_RAT	149-193	45	2	A:149-193 B:149-193	45 45
1.5	ENSRNOT00000015961	5	ENSRNOE00000104062	chr5:136321598-136321804	207	FAAH1_RAT	193-262	70	2	A:193-262 B:193-262	70 70
1.6	ENSRNOT00000015961	6	ENSRNOE00000104198	chr5:136322049-136322089	41	FAAH1_RAT	262-276	15	2	A:262-276 B:262-276	15 15
1.7	ENSRNOT00000015961	7	ENSRNOE00000111834	chr5:136322314-136322438	125	FAAH1_RAT	276-317	42	2	A:276-317 B:276-317	42 42
1.8	ENSRNOT00000015961	8	ENSRNOE00000104455	chr5:136323598-136323723	126	FAAH1_RAT	318-359	42	2	A:318-359 B:318-359	42 42
1.9	ENSRNOT00000015961	9	ENSRNOE00000112023	chr5:136324170-136324267	98	FAAH1_RAT	360-392	33	2	A:360-392 B:360-392	33 33
1.10	ENSRNOT00000015961	10	ENSRNOE00000105978	chr5:136325413-136325512	100	FAAH1_RAT	392-425	34	2	A:392-425 B:392-425	34 34
1.11	ENSRNOT00000015961	11	ENSRNOE00000106118	chr5:136325776-136325816	41	FAAH1_RAT	426-439	14	2	A:426-439 B:426-439	14 14
1.12a	ENSRNOT00000015961	12a	ENSRNOE00000318212	chr5:136326509-136326548	40	FAAH1_RAT	439-452	14	2	A:439-452 B:439-452	14 14
1.15b	ENSRNOT00000015961	15b	ENSRNOE00000225847	chr5:136326988-136327096	109	FAAH1_RAT	453-489	37	2	A:453-489 B:453-489	37 37
1.16a	ENSRNOT00000015961	16a	ENSRNOE00000110963	chr5:136327622-136327767	146	FAAH1_RAT	489-537	49	2	A:489-537 B:489-537	49 49
1.17	ENSRNOT00000015961	17	ENSRNOE00000112221	chr5:136327964-136329817	1854	FAAH1_RAT	538-579	42	2	A:538-575 B:538-574	38 37

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:543
 aligned with FAAH1_RAT | P97612 from UniProtKB/Swiss-Prot  Length:579

    Alignment length:543
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572   
            FAAH1_RAT    33 GRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSAGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQ 575
               SCOP domains d2vyaa_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2vyaA00 A:33-575 Amidase signature (AS) enzymes                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh.........eeeee.............hhhhh.......hhhhhhhhhh..eeeeee..hhhhh....ee...ee..............hhhhhhhhhh....eeeeee....hhhhhhhh..eeee.......................eeeeee.hhhhhhhhhhhhhhhhhhhhh........hhhhhhh....eeee.........hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhhhh...hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhhhhh.....hhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMIDASES  PDB: A:215-246        ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: A:33-65          Exon 1.2  PDB: A:66-103               Exon 1.3  PDB: A:104-148 UniProt: 104-148    Exon 1.4  PDB: A:149-193 UniProt: 149-193    --------------------------------------------------------------------Exon 1.6       -----------------------------------------Exon 1.8  PDB: A:318-359 UniProt: 318-359 --------------------------------Exon 1.10  PDB: A:392-425         Exon 1.11     -------------Exon 1.15b  PDB: A:453-489           ------------------------------------------------Exon 1.17  PDB: A:538-575 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.5  PDB: A:193-262 UniProt: 193-262                             -------------Exon 1.7  PDB: A:276-317 UniProt: 276-317 ------------------------------------------Exon 1.9  PDB: A:360-392         ----------------------------------------------Exon 1.12a    ------------------------------------Exon 1.16a  PDB: A:489-537 UniProt: 489-537      -------------------------------------- Transcript 1 (2)
                 2vya A  33 GRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQ 575
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572

Chain B from PDB  Type:PROTEIN  Length:541
 aligned with FAAH1_RAT | P97612 from UniProtKB/Swiss-Prot  Length:579

    Alignment length:541
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573 
            FAAH1_RAT    34 RQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSAGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTP 574
               SCOP domains d2vyab_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 2vyaB00 B:34-574 Amidase signature (AS) enzymes                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATH domains
           Pfam domains (1) -------------------------------------------------------------Amidase-2vyaB01 B:95-562                                                                                                                                                                                                                                                                                                                                                                                                                                                            ------------ Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------Amidase-2vyaB02 B:95-562                                                                                                                                                                                                                                                                                                                                                                                                                                                            ------------ Pfam domains (2)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh.........eeeee.............hhhhh.......hhhhhhhhhh..eeeeee..hhhhh....ee...ee..............hhhhhhhhhh....eeeeee....hhhhhhhhh.eeee.......................eeeeee.hhhhhhhhhhhhhhhhhhhhh........hhhhhhh....eeee.........hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhhhh...hhhhhhh......hhhhhhhhhhhh.hhhhhhhhhhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh...eeeeeeee.hhhhhhhhhhh.....hhhhhhhhhhhh.....eeeeeeee...hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMIDASES  PDB: B:215-246        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: B:34-65         Exon 1.2  PDB: B:66-103               Exon 1.3  PDB: B:104-148 UniProt: 104-148    Exon 1.4  PDB: B:149-193 UniProt: 149-193    --------------------------------------------------------------------Exon 1.6       -----------------------------------------Exon 1.8  PDB: B:318-359 UniProt: 318-359 --------------------------------Exon 1.10  PDB: B:392-425         Exon 1.11     -------------Exon 1.15b  PDB: B:453-489           ------------------------------------------------Exon 1.17  PDB: B:538-574             Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.5  PDB: B:193-262 UniProt: 193-262                             -------------Exon 1.7  PDB: B:276-317 UniProt: 276-317 ------------------------------------------Exon 1.9  PDB: B:360-392         ----------------------------------------------Exon 1.12a    ------------------------------------Exon 1.16a  PDB: B:489-537 UniProt: 489-537      ------------------------------------- Transcript 1 (2)
                 2vya B  34 RQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTP 574
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Amidase signature (AS) enzymes (41)

Superfamily: Amidase signature (AS) enzymes (41)

Family: Amidase signature (AS) enzymes (41)

Protein domain: automated matches (19)

Norway rat (Rattus norvegicus) [TaxId: 10116] (19)

1a	d2vyaa_	A:
1b	d2vyab_	B:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: Amidase signature (AS) enzymes (22)

Homologous Superfamily: Amidase signature (AS) enzymes (22)

Rat (Rattus norvegicus) (7)

1a	2vyaB00	B:34-574
1b	2vyaA00	A:33-575

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Amidase] (17)

Family: Amidase (17)

Rattus norvegicus (Rat) (15)

1a	Amidase-2vyaB01	B:95-562
1b	Amidase-2vyaB02	B:95-562

Asymmetric Unit(hide GO term definitions)

Chain A,B (FAAH1_RAT | P97612)

molecular function
	GO:0004040	amidase activity	Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3.
	GO:0103073	anandamide amidohydrolase activity	Catalysis of the reaction: anandamide + H2O <=> arachidonate + ethanolaminium(1+)
	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction.
	GO:0017064	fatty acid amide hydrolase activity	Catalysis of the hydrolysis of a fatty acid amide to yield a fatty acid.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016788	hydrolase activity, acting on ester bonds	Catalysis of the hydrolysis of any ester bond.
	GO:0008289	lipid binding	Interacting selectively and non-covalently with a lipid.
	GO:0005543	phospholipid binding	Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
	GO:0009062	fatty acid catabolic process	The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
	GO:0006631	fatty acid metabolic process	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0000139	Golgi membrane	The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0005789	endoplasmic reticulum membrane	The lipid bilayer surrounding the endoplasmic reticulum.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0031090	organelle membrane	A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Gly A:216 - Ser A:217	[ RasMol ]
		Gly A:476 - Pro A:477	[ RasMol ]
		Gly B:216 - Ser B:217	[ RasMol ]
		Gly B:476 - Pro B:477	[ RasMol ]

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

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Access by PDB/NDB ID
	2vya
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	3.5.1.4
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1mt5	CRYSTAL STRUCTURE OF FATTY ACID AMIDE HYDROLASE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 7)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (15, 30)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (18, 18)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File