Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO N-6-(RIBITYLAMINO)PYRIMIDINE-2,4(1H,3H)-DIONE-5-YL-PROPIONAMIDE
 
Authors :  E. Morgunova, Y. Zhang, G. Jin, B. Illarionov, A. Bacher, M. Fischer, M. R. Ladenstein
Date :  27 Nov 07  (Deposition) - 08 Apr 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Keywords :  Transferase, Lumazine Synthase, Riboflavin Biosynthesis, Mycobacterium Tuberculosis (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Zhang, B. Illarionov, E. Morgunova, A. Bacher, M. Fischer, R. Ladenstein, M. Cushman
A New Series Of N-[2, 4-Dioxo-6-D-Ribitylamino-1, 2, 3, 4-Tetrahydropyrimidin-5-Yl]Oxalamic Acid Derivatives As Inhibitors Of Lumazine Syntase And Riboflavin Synthase: Design, Synthesis, Biochemical Evaluation, Crystallography And Mechanistic Implications.
J. Org. Chem. V. 73 2715 2008
PubMed-ID: 18331058  |  Reference-DOI: 10.1021/JO702631A

(-) Compounds

Molecule 1 - 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE
    ChainsA, B, C, D, E, F, G, H, I, J
    EC Number2.5.1.9
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Cell LineXL1-BLUE
    Expression System PlasmidPNCO-MT-LS
    Expression System Taxid562
    Expression System VectorPNCO113
    Organism ScientificMYCOBACTERIUM TUBERCULOSIS
    Organism Taxid1773
    SynonymDMRL SYNTHASE , LUMAZINE SYNTHASE, RIBOFLAVIN SYNTHASE BETA CHAIN

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit ABCDEFGHIJ
Biological Unit 1 (1x)ABCDE     
Biological Unit 2 (1x)     FGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 35)

Asymmetric Unit (3, 35)
No.NameCountTypeFull Name
1K15Ligand/IonPOTASSIUM ION
2PO410Ligand/IonPHOSPHATE ION
3Y1910Ligand/Ion1-DEOXY-1-{[(5S)-2,6-DIOXO-5-(PROPANOYLAMINO)-1,2,5,6-TETRAHYDROPYRIMIDIN-4-YL]AMINO}-D-RIBITOL
Biological Unit 1 (2, 10)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2PO45Ligand/IonPHOSPHATE ION
3Y195Ligand/Ion1-DEOXY-1-{[(5S)-2,6-DIOXO-5-(PROPANOYLAMINO)-1,2,5,6-TETRAHYDROPYRIMIDIN-4-YL]AMINO}-D-RIBITOL
Biological Unit 2 (2, 10)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2PO45Ligand/IonPHOSPHATE ION
3Y195Ligand/Ion1-DEOXY-1-{[(5S)-2,6-DIOXO-5-(PROPANOYLAMINO)-1,2,5,6-TETRAHYDROPYRIMIDIN-4-YL]AMINO}-D-RIBITOL

(-) Sites  (35, 35)

Asymmetric Unit (35, 35)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:27 , HIS A:28 , GLY A:58 , ALA A:59 , ILE A:60 , GLU A:61 , VAL A:81 , VAL A:82 , ILE A:83 , HIS A:89 , PO4 A:702 , HOH A:2007 , HOH A:2049 , HOH A:2087 , ALA B:113 , ASN B:114BINDING SITE FOR RESIDUE Y19 A 201
02AC2SOFTWAREALA A:70 , HIS A:73 , THR A:110 , HOH A:2036 , HOH A:2064BINDING SITE FOR RESIDUE K A 601
03AC3SOFTWAREGLU A:155 , LEU A:156 , ARG A:157 , HOH A:2085 , LEU J:156 , ARG J:157BINDING SITE FOR RESIDUE K A 603
04AC4SOFTWAREGLY A:85 , GLN A:86 , THR A:87 , Y19 A:201 , HOH A:2048 , HOH A:2087 , ARG B:128BINDING SITE FOR RESIDUE PO4 A 702
05AC5SOFTWARETRP B:27 , GLY B:58 , ALA B:59 , ILE B:60 , GLU B:61 , VAL B:81 , VAL B:82 , ILE B:83 , HIS B:89 , PO4 B:702 , HOH B:2080 , HOH B:2081 , HOH B:2082 , HOH B:2083 , ALA C:113 , ASN C:114BINDING SITE FOR RESIDUE Y19 B 201
06AC6SOFTWAREALA B:70 , HIS B:73 , THR B:110 , HOH B:2022 , HOH B:2058BINDING SITE FOR RESIDUE K B 601
07AC7SOFTWAREGLU B:155 , LEU B:156 , ARG B:157 , HOH B:2079 , GLU I:155 , LEU I:156 , ARG I:157BINDING SITE FOR RESIDUE K B 603
08AC8SOFTWAREGLY B:85 , GLN B:86 , THR B:87 , HIS B:89 , Y19 B:201 , HOH B:2081 , HOH B:2084 , HOH B:2085 , ARG C:128BINDING SITE FOR RESIDUE PO4 B 702
09AC9SOFTWARETRP C:27 , GLY C:58 , ALA C:59 , ILE C:60 , GLU C:61 , VAL C:81 , VAL C:82 , ILE C:83 , HIS C:89 , PO4 C:702 , HOH C:2057 , HOH C:2058 , ALA D:113 , ASN D:114 , LYS D:138BINDING SITE FOR RESIDUE Y19 C 201
10BC1SOFTWAREALA C:70 , HIS C:73 , THR C:110 , HOH C:2027BINDING SITE FOR RESIDUE K C 601
11BC2SOFTWAREGLU C:155 , LEU C:156 , ARG C:157 , LEU H:156 , ARG H:157BINDING SITE FOR RESIDUE K C 603
12BC3SOFTWAREGLY C:85 , GLN C:86 , THR C:87 , Y19 C:201 , HOH C:2058 , HOH C:2059 , ARG D:128BINDING SITE FOR RESIDUE PO4 C 702
13BC4SOFTWARETRP D:27 , GLY D:58 , ALA D:59 , ILE D:60 , GLU D:61 , VAL D:81 , VAL D:82 , ILE D:83 , HIS D:89 , PO4 D:702 , HOH D:2066 , HOH D:2067 , HOH D:2068 , HOH D:2069 , ALA E:113 , ASN E:114BINDING SITE FOR RESIDUE Y19 D 201
14BC5SOFTWAREALA D:70 , HIS D:73 , THR D:110 , HOH D:2051BINDING SITE FOR RESIDUE K D 601
15BC6SOFTWAREGLU D:155 , LEU D:156 , ARG D:157 , LEU G:156 , ARG G:157 , HOH G:2050BINDING SITE FOR RESIDUE K D 603
16BC7SOFTWAREGLY D:85 , GLN D:86 , THR D:87 , Y19 D:201 , HOH D:2066 , HOH D:2070 , ARG E:128BINDING SITE FOR RESIDUE PO4 D 702
17BC8SOFTWAREALA A:113 , ASN A:114 , HOH A:2079 , TRP E:27 , GLY E:58 , ALA E:59 , ILE E:60 , GLU E:61 , VAL E:81 , VAL E:82 , ILE E:83 , HIS E:89 , PO4 E:702 , HOH E:2009 , HOH E:2082 , HOH E:2083 , HOH E:2084BINDING SITE FOR RESIDUE Y19 E 201
18BC9SOFTWAREALA E:70 , HIS E:73 , THR E:110 , HOH E:2065BINDING SITE FOR RESIDUE K E 601
19CC1SOFTWAREGLU E:155 , LEU E:156 , ARG E:157 , GLU F:155 , ARG F:157 , HOH F:2071BINDING SITE FOR RESIDUE K E 603
20CC2SOFTWAREARG A:128 , GLY E:85 , GLN E:86 , THR E:87 , Y19 E:201 , HOH E:2052 , HOH E:2082 , HOH E:2084BINDING SITE FOR RESIDUE PO4 E 702
21CC3SOFTWARETRP F:27 , GLY F:58 , ALA F:59 , ILE F:60 , GLU F:61 , VAL F:81 , VAL F:82 , ILE F:83 , HIS F:89 , PO4 F:702 , HOH F:2073 , HOH F:2074 , HOH F:2075 , HOH F:2076 , ALA G:113 , ASN G:114BINDING SITE FOR RESIDUE Y19 F 201
22CC4SOFTWAREALA F:70 , HIS F:73 , THR F:110 , HOH F:2029BINDING SITE FOR RESIDUE K F 601
23CC5SOFTWAREGLY F:85 , GLN F:86 , THR F:87 , HIS F:89 , Y19 F:201 , HOH F:2035 , ARG G:128 , LYS G:138BINDING SITE FOR RESIDUE PO4 F 702
24CC6SOFTWARETRP G:27 , GLY G:58 , ALA G:59 , ILE G:60 , GLU G:61 , VAL G:81 , VAL G:82 , ILE G:83 , HIS G:89 , PO4 G:702 , HOH G:2051 , HOH G:2052 , ALA H:113 , ASN H:114BINDING SITE FOR RESIDUE Y19 G 201
25CC7SOFTWAREALA G:70 , HIS G:73 , THR G:110 , HOH G:2020 , HOH G:2021 , HOH G:2022BINDING SITE FOR RESIDUE K G 601
26CC8SOFTWAREGLY G:85 , GLN G:86 , THR G:87 , Y19 G:201 , HOH G:2051 , HOH G:2053 , ARG H:128BINDING SITE FOR RESIDUE PO4 G 702
27CC9SOFTWARETRP H:27 , GLY H:58 , ALA H:59 , ILE H:60 , GLU H:61 , VAL H:81 , VAL H:82 , ILE H:83 , HIS H:89 , PO4 H:702 , HOH H:2077 , HOH H:2078 , HOH H:2079 , HOH H:2080 , ALA I:113 , ASN I:114 , HOH I:2062BINDING SITE FOR RESIDUE Y19 H 201
28DC1SOFTWAREALA H:70 , HIS H:73 , THR H:110BINDING SITE FOR RESIDUE K H 601
29DC2SOFTWAREGLY H:85 , GLN H:86 , THR H:87 , Y19 H:201 , HOH H:2078 , HOH H:2080 , ARG I:128 , HOH I:2062BINDING SITE FOR RESIDUE PO4 H 702
30DC3SOFTWARETRP I:27 , GLY I:58 , ALA I:59 , ILE I:60 , GLU I:61 , VAL I:81 , VAL I:82 , ILE I:83 , HIS I:89 , PO4 I:702 , HOH I:2071 , HOH I:2072 , HOH I:2073 , HOH I:2074 , HOH I:2075 , ALA J:113 , ASN J:114 , LYS J:138BINDING SITE FOR RESIDUE Y19 I 201
31DC4SOFTWAREALA I:70 , HIS I:73 , THR I:110 , HOH I:2030 , HOH I:2048BINDING SITE FOR RESIDUE K I 601
32DC5SOFTWAREGLY I:85 , GLN I:86 , THR I:87 , Y19 I:201 , HOH I:2074 , HOH I:2075 , HOH I:2076 , HOH I:2077 , ARG J:128BINDING SITE FOR RESIDUE PO4 I 702
33DC6SOFTWAREALA F:113 , ASN F:114 , LYS F:138 , TRP J:27 , GLY J:58 , ALA J:59 , ILE J:60 , GLU J:61 , VAL J:81 , VAL J:82 , ILE J:83 , HIS J:89 , PO4 J:702 , HOH J:2008 , HOH J:2098BINDING SITE FOR RESIDUE Y19 J 201
34DC7SOFTWAREALA J:70 , HIS J:73 , THR J:110 , HOH J:2050 , HOH J:2075BINDING SITE FOR RESIDUE K J 601
35DC8SOFTWAREARG F:128 , GLY J:85 , GLN J:86 , THR J:87 , Y19 J:201 , HOH J:2098 , HOH J:2099BINDING SITE FOR RESIDUE PO4 J 702

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2VI5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2VI5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2VI5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2VI5)

(-) Exons   (0, 0)

(no "Exon" information available for 2VI5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:150
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:150
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
           RISB_MYCTO    11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2vi5A00 A:11-160  [code=3.40.50.960, no name defined]                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeee...hhhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vi5 A  11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160

Chain A from PDB  Type:PROTEIN  Length:150
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:150
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
           RISB_MYCTU    11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2vi5A00 A:11-160  [code=3.40.50.960, no name defined]                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeee...hhhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vi5 A  11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160

Chain B from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTO    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5B00 B:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 B  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain B from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTU    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5B00 B:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 B  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain C from PDB  Type:PROTEIN  Length:146
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:146
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      
           RISB_MYCTO    15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5C00 C:15-160  [code=3.40.50.960, no name defined]                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 C  15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      

Chain C from PDB  Type:PROTEIN  Length:146
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:146
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      
           RISB_MYCTU    15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5C00 C:15-160  [code=3.40.50.960, no name defined]                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 C  15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      

Chain D from PDB  Type:PROTEIN  Length:148
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:148
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        
           RISB_MYCTO    13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5D00 D:13-160  [code=3.40.50.960, no name defined]                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 D  13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        

Chain D from PDB  Type:PROTEIN  Length:148
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:148
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        
           RISB_MYCTU    13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5D00 D:13-160  [code=3.40.50.960, no name defined]                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 D  13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        

Chain E from PDB  Type:PROTEIN  Length:151
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:151
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159 
           RISB_MYCTO    10 LPSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5E00 E:10-160  [code=3.40.50.960, no name defined]                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 E  10 LPSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159 

Chain E from PDB  Type:PROTEIN  Length:151
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:151
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159 
           RISB_MYCTU    10 LPSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5E00 E:10-160  [code=3.40.50.960, no name defined]                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 E  10 LPSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159 

Chain F from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTO    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5F00 F:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 F  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain F from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTU    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5F00 F:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 F  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain G from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTO    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5G00 G:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 G  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain G from PDB  Type:PROTEIN  Length:147
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:147
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       
           RISB_MYCTU    14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5G00 G:14-160  [code=3.40.50.960, no name defined]                                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 G  14 DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       

Chain H from PDB  Type:PROTEIN  Length:148
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:148
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        
           RISB_MYCTO    13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5H00 H:13-160  [code=3.40.50.960, no name defined]                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 H  13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        

Chain H from PDB  Type:PROTEIN  Length:148
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:148
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        
           RISB_MYCTU    13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5H00 H:13-160  [code=3.40.50.960, no name defined]                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 H  13 LDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152        

Chain I from PDB  Type:PROTEIN  Length:150
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:150
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
           RISB_MYCTO    11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2vi5I00 I:11-160  [code=3.40.50.960, no name defined]                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vi5 I  11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160

Chain I from PDB  Type:PROTEIN  Length:150
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:150
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
           RISB_MYCTU    11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2vi5I00 I:11-160  [code=3.40.50.960, no name defined]                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vi5 I  11 PSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160

Chain J from PDB  Type:PROTEIN  Length:146
 aligned with RISB_MYCTO | P9WHE8 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:146
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      
           RISB_MYCTO    15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5J00 J:15-160  [code=3.40.50.960, no name defined]                                                                                              CATH domains
           Pfam domains (1) DMRL_synthase-2vi5J01 J:15-156                                                                                                                ---- Pfam domains (1)
           Pfam domains (2) DMRL_synthase-2vi5J02 J:15-156                                                                                                                ---- Pfam domains (2)
           Pfam domains (3) DMRL_synthase-2vi5J03 J:15-156                                                                                                                ---- Pfam domains (3)
           Pfam domains (4) DMRL_synthase-2vi5J04 J:15-156                                                                                                                ---- Pfam domains (4)
           Pfam domains (5) DMRL_synthase-2vi5J05 J:15-156                                                                                                                ---- Pfam domains (5)
           Pfam domains (6) DMRL_synthase-2vi5J06 J:15-156                                                                                                                ---- Pfam domains (6)
           Pfam domains (7) DMRL_synthase-2vi5J07 J:15-156                                                                                                                ---- Pfam domains (7)
           Pfam domains (8) DMRL_synthase-2vi5J08 J:15-156                                                                                                                ---- Pfam domains (8)
           Pfam domains (9) DMRL_synthase-2vi5J09 J:15-156                                                                                                                ---- Pfam domains (9)
          Pfam domains (10) DMRL_synthase-2vi5J10 J:15-156                                                                                                                ---- Pfam domains (10)
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 J  15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      

Chain J from PDB  Type:PROTEIN  Length:146
 aligned with RISB_MYCTU | P9WHE9 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:146
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      
           RISB_MYCTU    15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vi5J00 J:15-160  [code=3.40.50.960, no name defined]                                                                                              CATH domains
           Pfam domains (1) DMRL_synthase-2vi5J01 J:15-156                                                                                                                ---- Pfam domains (1)
           Pfam domains (2) DMRL_synthase-2vi5J02 J:15-156                                                                                                                ---- Pfam domains (2)
           Pfam domains (3) DMRL_synthase-2vi5J03 J:15-156                                                                                                                ---- Pfam domains (3)
           Pfam domains (4) DMRL_synthase-2vi5J04 J:15-156                                                                                                                ---- Pfam domains (4)
           Pfam domains (5) DMRL_synthase-2vi5J05 J:15-156                                                                                                                ---- Pfam domains (5)
           Pfam domains (6) DMRL_synthase-2vi5J06 J:15-156                                                                                                                ---- Pfam domains (6)
           Pfam domains (7) DMRL_synthase-2vi5J07 J:15-156                                                                                                                ---- Pfam domains (7)
           Pfam domains (8) DMRL_synthase-2vi5J08 J:15-156                                                                                                                ---- Pfam domains (8)
           Pfam domains (9) DMRL_synthase-2vi5J09 J:15-156                                                                                                                ---- Pfam domains (9)
          Pfam domains (10) DMRL_synthase-2vi5J10 J:15-156                                                                                                                ---- Pfam domains (10)
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhh....eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhh.........hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vi5 J  15 ASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS 160
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2VI5)

(-) CATH Domains  (1, 10)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 10)

Asymmetric Unit

(-) Gene Ontology  (6, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J   (RISB_MYCTO | P9WHE8)
molecular function
    GO:0000906    6,7-dimethyl-8-ribityllumazine synthase activity    Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0009231    riboflavin biosynthetic process    The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
cellular component
    GO:0009349    riboflavin synthase complex    An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.

Chain A,B,C,D,E,F,G,H,I,J   (RISB_MYCTU | P9WHE9)
molecular function
    GO:0000906    6,7-dimethyl-8-ribityllumazine synthase activity    Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0040007    growth    The increase in size or mass of an entire organism, a part of an organism or a cell.
    GO:0009231    riboflavin biosynthetic process    The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0009349    riboflavin synthase complex    An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    K  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    Y19  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2vi5)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2vi5
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  RISB_MYCTO | P9WHE8
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RISB_MYCTU | P9WHE9
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.5.1.9
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  RISB_MYCTO | P9WHE8
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RISB_MYCTU | P9WHE9
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RISB_MYCTO | P9WHE81w19 1w29 2c92 2c94 2c97 2c9b 2c9d
        RISB_MYCTU | P9WHE91w19 1w29 2c92 2c94 2c97 2c9b 2c9d

(-) Related Entries Specified in the PDB File

1w19 LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL) PROPANE 1-PHOSPHATE
1w29 LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL) BUTANE 1-PHOSPHATE
2c92 LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL) PENTANE 1 PHOSPHATE
2c94 LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL) 1 ,1 DIFLUOROPENTANE-1-PHOSPHATE
2c97 LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 4-(6-CHLORO-2,4- DIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL) BUTYL PHOSPHATE
2c9b LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL)
2c9d LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 3-(1,3,7-TRIHYDRO- 9-D-RIBITYL-2,6,8-PURINETRIONE-7-YL) HEXANE 1-PHOSPHATE