Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO N (RIBITYLAMINO)PYRIMIDINE-2,4(1H,3H)-DIONE-5-YL-PROPIONAMIDE
Keywords TRANSFERASE, LUMAZINE SYNTHASE, RIBOFLAVIN BIOSYNTHESIS, MYCOBACTERIUM TUBERCULOSIS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VI5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  A 150 1084 0
2  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  B 147 1063 0
3  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  C 146 1055 0
4  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  D 148 1071 0
5  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  E 151 1092 0
6  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  F 147 1063 0
7  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  G 147 1063 0
8  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  H 148 1071 0
9  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  I 150 1084 0
10  Protein   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  J 146 1055 0
11  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  A 4 0 30
12  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  B 4 0 30
13  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  C 4 0 30
14  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  D 4 0 30
15  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  E 4 0 30
16  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  F 3 0 29
17  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  G 3 0 29
18  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  H 3 0 29
19  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  I 3 0 29
20  Ligand   6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE  J 3 0 29
21 Water     770 0 770
total       2285 10701 1065

Proteins
Unit 1 PRO11 SER12 LEU13 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 2 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 3 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 4 LEU13 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 5 LEU10 PRO11 SER12 LEU13 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 6 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 7 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 8 LEU13 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 9 PRO11 SER12 LEU13 ASP14 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160
Unit 10 ALA15 SER16 GLY17 VAL18 ARG19 LEU20 ALA21 ILE22 VAL23 ALA24 SER25 SER26 TRP27 HIS28 GLY29 LYS30 ILE31 CYS32 ASP33 ALA34 LEU35 LEU36 ASP37 GLY38 ALA39 ARG40 LYS41 VAL42 ALA43 ALA44 GLY45 CYS46 GLY47 LEU48 ASP49 ASP50 PRO51 THR52 VAL53 VAL54 ARG55 VAL56 LEU57 GLY58 ALA59 ILE60 GLU61 ILE62 PRO63 VAL64 VAL65 ALA66 GLN67 GLU68 LEU69 ALA70 ARG71 ASN72 HIS73 ASP74 ALA75 VAL76 VAL77 ALA78 LEU79 GLY80 VAL81 VAL82 ILE83 ARG84 GLY85 GLN86 THR87 PRO88 HIS89 PHE90 ASP91 TYR92 VAL93 CYS94 ASP95 ALA96 VAL97 THR98 GLN99 GLY100 LEU101 THR102 ARG103 VAL104 SER105 LEU106 ASP107 SER108 SER109 THR110 PRO111 ILE112 ALA113 ASN114 GLY115 VAL116 LEU117 THR118 THR119 ASN120 THR121 GLU122 GLU123 GLN124 ALA125 LEU126 ASP127 ARG128 ALA129 GLY130 LEU131 PRO132 THR133 SER134 ALA135 GLU136 ASP137 LYS138 GLY139 ALA140 GLN141 ALA142 THR143 VAL144 ALA145 ALA146 LEU147 ALA148 THR149 ALA150 LEU151 THR152 LEU153 ARG154 GLU155 LEU156 ARG157 ALA158 HIS159 SER160

Ligands
Unit 11 Y19201 K601 K603 PO4702
Unit 12 Y19201 K601 K603 PO4702
Unit 13 Y19201 K601 K603 PO4702
Unit 14 Y19201 K601 K603 PO4702
Unit 15 Y19201 K601 K603 PO4702
Unit 16 Y19201 K601 PO4702
Unit 17 Y19201 K601 PO4702
Unit 18 Y19201 K601 PO4702
Unit 19 Y19201 K601 PO4702
Unit 20 Y19201 K601 PO4702

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany