Chain A from PDB Type:PROTEIN Length:226
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:234
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PYRH_UREPA 2 RKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1a_ A: automated matches SCOP domains
CATH domains 2va1A00 A:2-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeeeehhhhhh.......hhhhhhhhhhhhhhhh...eeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhhh..eeeeee..........--------...eeehhhhhhhh....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2va1 A 2 RKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSD--------FYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 | - | 181 191 201 211 221 231
168 177
Chain B from PDB Type:PROTEIN Length:235
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:241
1
| 4 14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
PYRH_UREPA - ------MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1b_ B: automated matches SCOP domains
CATH domains 2va1B00 B:-5-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeeeeeehhhhhh.......hhhhhhhhhhhhhhhh..eeeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhh...eeeeee........------.......eeehhhhhhh.....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2va1 B -5 PRGSHMMRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYD------PNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
4 14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 | 174 184 194 204 214 224 234
166 173
Chain C from PDB Type:PROTEIN Length:227
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:233
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232
PYRH_UREPA 3 KQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1c_ C: automated matches SCOP domains
CATH domains 2va1C00 C:3-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeehhhhhh.......hhhhhhhhhhhhhhhh...eeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhh...eeeeee.....ee...------..ee.eee.hhhhhh.....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2va1 C 3 KQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSD------AQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 | - | 182 192 202 212 222 232
168 175
Chain D from PDB Type:PROTEIN Length:228
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:235
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
PYRH_UREPA 1 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1d_ D: automated matches SCOP domains
CATH domains 2va1D00 D:1-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeehhhhhh.......hhhhhhhhhhhhhhhh..eeeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhh...eeeeee.........-------.....eeehhhhhhh.....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2va1 D 1 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDS-------AQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 | - | 180 190 200 210 220 230
167 175
Chain E from PDB Type:PROTEIN Length:235
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:235
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
PYRH_UREPA 1 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1e_ E: automated matches SCOP domains
CATH domains 2va1E00 E:1-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeehhhhhh.......hhhhhhhhhhhhhhhh..eeeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhh...eeeeee.....................eeehhhhhhh.....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2va1 E 1 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
Chain F from PDB Type:PROTEIN Length:226
aligned with PYRH_UREPA | Q9PPX6 from UniProtKB/Swiss-Prot Length:235
Alignment length:234
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PYRH_UREPA 2 RKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
SCOP domains d2va1f_ F: automated matches SCOP domains
CATH domains 2va1F00 F:2-235 [code=3.40.1160.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeeeehhhhhh.......hhhhhhhhhhhhhhhh..eeeeeee......hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee........ee.hhhhhhhhhhh..eeeee........hhhhhhhhhhhhh...eeeeee.........--------....eeehhhhhhh.....hhhhhhhhhhh..eeeeee....hhhhhhhh.....eeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2va1 F 2 RKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDS--------QFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 235
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 | - | 181 191 201 211 221 231
167 176
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |