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(-) Description

Title :  L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI ( MUTANT A88F-E192A)
 
Authors :  D. Grueninger, G. E. Schulz
Date :  24 Aug 07  (Deposition) - 15 Jan 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Entropy Index, Metal-Binding, Oligomerization, Zinc, Lyase, Aldolase, Class Ii, Cytoplasm, Cleavage Of L-Rhamnulose-1-Phosphate To Dihydroxyacetoneph Bacterial L-Rhamnose Metabolism, Interface Design, Surface Mutation, 2-Ketose Degradation, Protein-Protein Interface, Rare Sugar, Aggregation, Zinc Enzyme, Fibrillation, Rhamnose Metabolism, Protein Engineering (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Grueninger, N. Treiber, M. O. P. Ziegler, J. W. A. Koetter, M. -S. Schulze, G. E. Schulz
Designed Protein-Protein Association.
Science V. 319 206 2008
PubMed-ID: 18187656  |  Reference-DOI: 10.1126/SCIENCE.1150421
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RHAMNULOSE-1-PHOSPHATE ALDOLASE
    Chains: A, B, C, D
    EC Number: 4.1.2.19
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKK223-3
    Expression System Strain: JM105
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 31)

Asymmetric/Biological Unit (5, 31)
No.NameCountTypeFull Name
1CIT4Ligand/IonCITRIC ACID
2GOL5Ligand/IonGLYCEROL
3PGO8Ligand/IonS-1,2-PROPANEDIOL
4PO410Ligand/IonPHOSPHATE ION
5ZN4Ligand/IonZINC ION

(-) Sites  (31, 31)

Asymmetric Unit (31, 31)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:141 , HIS A:143 , HIS A:212 , CIT A:1276BINDING SITE FOR RESIDUE ZN A1275
02AC2SOFTWAREHIS B:141 , HIS B:143 , HIS B:212 , CIT B:1276BINDING SITE FOR RESIDUE ZN B1275
03AC3SOFTWAREHIS C:141 , HIS C:143 , HIS C:212 , CIT C:1276BINDING SITE FOR RESIDUE ZN C1275
04AC4SOFTWAREHIS D:141 , HIS D:143 , HIS D:212 , CIT D:1276BINDING SITE FOR RESIDUE ZN D1275
05AC5SOFTWAREASN A:29 , GLY A:31 , ASN A:32 , GLU A:117 , HIS A:141 , HIS A:143 , PRO A:188 , HIS A:212 , ZN A:1275 , PO4 A:1277 , HOH A:2068 , HOH A:2292 , HOH A:2293 , HOH A:2294 , GLU C:171BINDING SITE FOR RESIDUE CIT A1276
06AC6SOFTWAREASN B:29 , GLY B:30 , GLY B:31 , ASN B:32 , GLU B:117 , HIS B:141 , HIS B:143 , PRO B:188 , HIS B:212 , ZN B:1275 , PO4 B:1277 , HOH B:2063 , HOH B:2177 , HOH B:2300 , GLU D:171BINDING SITE FOR RESIDUE CIT B1276
07AC7SOFTWAREGLU B:171 , ASN C:29 , GLY C:30 , GLY C:31 , ASN C:32 , GLU C:117 , HIS C:141 , HIS C:143 , PRO C:188 , HIS C:212 , ZN C:1275 , PO4 C:1277 , HOH C:2063 , HOH C:2304 , HOH C:2305BINDING SITE FOR RESIDUE CIT C1276
08AC8SOFTWAREGLU A:171 , ASN D:29 , GLY D:30 , GLY D:31 , ASN D:32 , GLU D:117 , HIS D:141 , HIS D:143 , PRO D:188 , HIS D:212 , ZN D:1275 , PO4 D:1277 , HOH D:2052 , HOH D:2161 , HOH D:2282BINDING SITE FOR RESIDUE CIT D1276
09AC9SOFTWAREASN A:29 , ASN A:32 , SER A:75 , GLY A:76 , THR A:115 , SER A:116 , CIT A:1276 , HOH A:2068 , HOH A:2123BINDING SITE FOR RESIDUE PO4 A1277
10BC1SOFTWAREASN B:29 , ASN B:32 , SER B:75 , GLY B:76 , THR B:115 , SER B:116 , CIT B:1276 , HOH B:2063 , HOH B:2065 , HOH B:2113BINDING SITE FOR RESIDUE PO4 B1277
11BC2SOFTWAREASN C:29 , ASN C:32 , SER C:75 , GLY C:76 , THR C:115 , SER C:116 , CIT C:1276 , HOH C:2063 , HOH C:2125BINDING SITE FOR RESIDUE PO4 C1277
12BC3SOFTWAREASN D:29 , ASN D:32 , SER D:75 , GLY D:76 , THR D:115 , SER D:116 , CIT D:1276 , HOH D:2052 , HOH D:2053 , HOH D:2098BINDING SITE FOR RESIDUE PO4 D1277
13BC4SOFTWAREHIS B:50 , GLN B:51 , HOH B:2087 , HIS C:46 , ASP C:47 , HOH C:2306 , HOH C:2307 , HOH C:2308BINDING SITE FOR RESIDUE PO4 C1278
14BC5SOFTWAREHIS A:46 , ASP A:47 , HIS D:50 , GLN D:51 , HOH D:2283 , HOH D:2284 , HOH D:2285BINDING SITE FOR RESIDUE PO4 D1278
15BC6SOFTWARETHR C:158 , GLU C:200 , LYS C:203 , HIS C:204 , HOH C:2309BINDING SITE FOR RESIDUE PO4 C1279
16BC7SOFTWARETHR D:158 , GLU D:200 , HIS D:204 , HOH D:2286BINDING SITE FOR RESIDUE PO4 D1279
17BC8SOFTWARETHR A:158 , GLU A:200 , LYS A:203 , HIS A:204 , HOH A:2295 , HOH A:2296BINDING SITE FOR RESIDUE PO4 A1278
18BC9SOFTWARETHR B:158 , GLU B:200 , LYS B:203 , HIS B:204 , HOH B:2301BINDING SITE FOR RESIDUE PO4 B1278
19CC1SOFTWAREARG A:80 , GLN A:83 , HOH A:2297 , HOH C:2013BINDING SITE FOR RESIDUE PGO A1279
20CC2SOFTWAREARG B:80 , GLN B:83 , HOH B:2302 , HOH D:2012 , HOH D:2032BINDING SITE FOR RESIDUE PGO B1279
21CC3SOFTWAREHOH B:2014 , HOH B:2038 , ARG C:80 , GLN C:83 , HOH C:2310BINDING SITE FOR RESIDUE PGO C1280
22CC4SOFTWAREHOH A:2014 , HOH A:2037 , ARG D:80 , GLN D:83BINDING SITE FOR RESIDUE PGO D1280
23CC5SOFTWARETYR A:242 , HOH A:2298 , HOH A:2299 , MET C:244BINDING SITE FOR RESIDUE PGO A1280
24CC6SOFTWARETHR A:190 , ASP A:191 , ALA A:192 , ARG B:262 , THR C:190 , ASP C:191 , ALA C:192 , GOL C:1281BINDING SITE FOR RESIDUE GOL A1281
25CC7SOFTWAREARG A:262 , THR B:190 , ASP B:191 , ALA B:192 , HOH B:2303 , THR D:190 , ASP D:191 , ALA D:192 , GOL D:1281BINDING SITE FOR RESIDUE GOL B1280
26CC8SOFTWARETHR A:190 , ASP A:191 , ALA A:192 , GOL A:1281 , ARG B:262 , THR C:190 , ASP C:191 , HOH C:2311 , HOH C:2312BINDING SITE FOR RESIDUE GOL C1281
27CC9SOFTWAREARG A:262 , THR B:190 , ASP B:191 , GOL B:1280 , THR D:190 , ASP D:191 , ARG D:262 , HOH D:2288 , HOH D:2289BINDING SITE FOR RESIDUE GOL D1281
28DC1SOFTWAREMET B:244 , HOH B:2304 , HOH B:2305 , LEU C:154 , TYR C:242BINDING SITE FOR RESIDUE PGO B1281
29DC2SOFTWAREMET A:244 , HOH A:2260 , VAL D:153 , LEU D:154 , PGO D:1283BINDING SITE FOR RESIDUE PGO D1282
30DC3SOFTWAREVAL D:160 , GLN D:164 , PGO D:1282 , HOH D:2290 , HOH D:2291BINDING SITE FOR RESIDUE PGO D1283
31DC4SOFTWAREASP A:222 , GLU A:223 , GLY D:76 , PHE D:78 , HOH D:2133 , HOH D:2292 , HOH D:2293 , HOH D:2294BINDING SITE FOR RESIDUE GOL D1284

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2V9N)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2V9N)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2V9N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2V9N)

(-) Exons   (0, 0)

(no "Exon" information available for 2V9N)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:274
 aligned with RHAD_ECOLI | P32169 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    
           RHAD_ECOLI     1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
               SCOP domains d2v9na_ A: L-rhamnulose-1-phosphate aldolase                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2v9nA00 A:1-274 L-fuculose-1-phosphate Aldolase                                                                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhhhhhhhhh....eeee....hhhhh..eeeee....hhhhh..hhhhheeeeee.....eeeeeee.........hhhhhhhhhhhhhhhhh....eeeee.hhhhhhhh.....hhhhhhhhhhhh..hhhhhh...eee.......hhhhhhhhhhhh....eeee...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v9n A   1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAFNLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    


Chain B from PDB  Type:PROTEIN  Length:274
 aligned with RHAD_ECOLI | P32169 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    
           RHAD_ECOLI     1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
               SCOP domains d2v9nb_ B: L-rhamnulose-1-phosphate aldolase                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2v9nB00 B:1-274 L-fuculose-1-phosphate Aldolase                                                                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhhhhhhhhh....eeee....hhhhh..eeeee....hhhhh..hhhhheeeeee.....eeeeeee.........hhhhhhhhhhhhhhhhh....eeeee.hhhhhhhh.....hhhhhhhhhhhh..hhhhhh...eee.......hhhhhhhhhhhh....eeee...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v9n B   1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAFNLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    


Chain C from PDB  Type:PROTEIN  Length:274
 aligned with RHAD_ECOLI | P32169 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    
           RHAD_ECOLI     1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
               SCOP domains d2v9nc_ C: L-rhamnulose-1-phosphate aldolase                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2v9nC00 C:1-274 L-fuculose-1-phosphate Aldolase                                                                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhhhhhhhhh....eeee....hhhhh..eeeee....hhhhhhhhhhhheeeeee.....eeeeeee.........hhhhhhhhhhhhhhhh.....eeeee.hhhhhhhh.....hhhhhhhhhhhh..hhhhhh...eee.......hhhhhhhhhhhh....eeee...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v9n C   1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAFNLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    


Chain D from PDB  Type:PROTEIN  Length:274
 aligned with RHAD_ECOLI | P32169 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    
           RHAD_ECOLI     1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
               SCOP domains d2v9nd_ D: L-rhamnulose-1-phosphate aldolase                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2v9nD00 D:1-274 L-fuculose-1-phosphate Aldolase                                                                                                                                                                                                                                    CATH domains
           Pfam domains (1) ----------Aldolase_II-2v9nD01 D:11-239                                                                                                                                                                                                         ----------------------------------- Pfam domains (1)
           Pfam domains (2) ----------Aldolase_II-2v9nD02 D:11-239                                                                                                                                                                                                         ----------------------------------- Pfam domains (2)
           Pfam domains (3) ----------Aldolase_II-2v9nD03 D:11-239                                                                                                                                                                                                         ----------------------------------- Pfam domains (3)
           Pfam domains (4) ----------Aldolase_II-2v9nD04 D:11-239                                                                                                                                                                                                         ----------------------------------- Pfam domains (4)
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhhhhhhhhh....eeee....hhhhh..eeeee....hhhhh..hhhhheeeeee.....eeeeeee.........hhhhhhhhhhhhhhhhh....eeeee.hhhhhhhh.....hhhhhhhhhhhh..hhhhhh...eee.......hhhhhhhhhhhh....eeee...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v9n D   1 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAFNLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL 274
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Aldolase_II] (19)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (RHAD_ECOLI | P32169)
molecular function
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008994    rhamnulose-1-phosphate aldolase activity    Catalysis of the reaction: L-rhamnulose 1-phosphate = glycerone phosphate + (S)-lactaldehyde.
biological process
    GO:0019323    pentose catabolic process    The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.
    GO:0019301    rhamnose catabolic process    The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.
    GO:0019299    rhamnose metabolic process    The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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  2v9n
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  RHAD_ECOLI | P32169
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  4.1.2.19
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  RHAD_ECOLI | P32169
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RHAD_ECOLI | P32169: 1gt7 1ojr 2uyu 2uyv 2v29 2v2a 2v2b 2v9e 2v9f 2v9g 2v9i 2v9l 2v9m 2v9o

(-) Related Entries Specified in the PDB File

1gt7 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI
1ojr L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A)
2uyu L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A88F-E192A)
2uyv L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y-E192A)
2v29 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT K15W)
2v2a L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A-K248G-R253A- E254A)
2v2b L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E117S-E192A-K248G- R253A-E254A)
2v9e L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A-K248W-A273S)
2v9f L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A-K248W-A273S)
2v9g L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y-L84W-E192A)
2v9i L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A-K248W-L274STOP )
2v9l L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y-E192A)
2v9m L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A87M-T109F-E192A)
2v9o L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A87M-T109F-E192A)