Chain A from PDB Type:PROTEIN Length:108
aligned with Q9LCU8_PARDE | Q9LCU8 from UniProtKB/TrEMBL Length:109
Alignment length:108
11 21 31 41 51 61 71 81 91 101
Q9LCU8_PARDE 2 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 109
SCOP domains d2oxga_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....eeee........eeeeeeeee.....................eeeeeeee..eeeeeeee........eeeeeeee...eeeeeeeee....eeeeeeeeeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
2oxg A 1 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 108
10 20 30 40 50 60 70 80 90 100
Chain B from PDB Type:PROTEIN Length:110
aligned with Q9LCU9_PARDE | Q9LCU9 from UniProtKB/TrEMBL Length:140
Alignment length:110
38 48 58 68 78 88 98 108 118 128 138
Q9LCU9_PARDE 29 STVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGGC 138
SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhh.........eee...ee.....eeeeee.....eeeeee......eeeeeee.......eeeeee.....eeeeeeee.....eeeeeeeeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------- Transcript
2oxg B 1 STVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGGC 110
10 20 30 40 50 60 70 80 90 100 110
Chain C from PDB Type:PROTEIN Length:101
aligned with Q9LCU8_PARDE | Q9LCU8 from UniProtKB/TrEMBL Length:109
Alignment length:107
11 21 31 41 51 61 71 81 91 101
Q9LCU8_PARDE 2 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAV 108
SCOP domains d2oxgc_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeee........eeeeeeeee..........------.....eeeeeeee..eeeeeeee........eeeeeeee...eeeeeeeee....eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
2oxg C 1 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRK------IPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAV 107
10 20 30 | - | 50 60 70 80 90 100
36 43
Chain D from PDB Type:PROTEIN Length:111
aligned with Q9LCU9_PARDE | Q9LCU9 from UniProtKB/TrEMBL Length:140
Alignment length:115
32 42 52 62 72 82 92 102 112 122 132
Q9LCU9_PARDE 23 GKAVMASTVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGG 137
SCOP domains ------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..----.hhhhhhhhhh..........eee...eeee...eeeeee...eeeeeeee......eeeeeee...eeeeeeeeee.....eeeeeeeee....eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
2oxg D 200 GS----STVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGG 109
| | 4 14 24 34 44 54 64 74 84 94 104
201 1
Chain E from PDB Type:PROTEIN Length:99
aligned with Q9LCU8_PARDE | Q9LCU8 from UniProtKB/TrEMBL Length:109
Alignment length:106
13 23 33 43 53 63 73 83 93 103
Q9LCU8_PARDE 4 DAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 109
SCOP domains d2oxge_ E: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eee........eeeeeeee.........-------......eeeeeeee..eeeeeeee........eeeeeeee...eeeeeeeee....eeeeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
2oxg E 3 DAKPRVKVPSSAKAGETVTVKALISHKMESGQ-------LIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 108
12 22 32 | 42 52 62 72 82 92 102
34 42
Chain F from PDB Type:PROTEIN Length:112
aligned with Q9LCU9_PARDE | Q9LCU9 from UniProtKB/TrEMBL Length:140
Alignment length:125
22 32 42 52 62 72 82 92 102 112 122 132
Q9LCU9_PARDE 13 FGGLAAAALPGKAVMASTVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGG 137
SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...-------------.hhhhhhhhhhh....ee...eee...eeee...eeeeee.....eeeeee......eeeeeee...eeeeeeeeee.....eeeeeeee.....eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
2oxg F 200 HGS-------------STVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGG 109
| - | 4 14 24 34 44 54 64 74 84 94 104
202 1
Chain Y from PDB Type:PROTEIN Length:112
aligned with Q9LCU9_PARDE | Q9LCU9 from UniProtKB/TrEMBL Length:140
Alignment length:116
32 42 52 62 72 82 92 102 112 122 132
Q9LCU9_PARDE 23 GKAVMASTVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGGC 138
SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ----------SoxY-2oxgY01 Y:5-110 Pfam domains (1)
Pfam domains (2) ----------SoxY-2oxgY02 Y:5-110 Pfam domains (2)
Pfam domains (3) ----------SoxY-2oxgY03 Y:5-110 Pfam domains (3)
Pfam domains (4) ----------SoxY-2oxgY04 Y:5-110 Pfam domains (4)
Sec.struct. author ..----hhhhhhhhhhhh...ee....eee...eeee...eeeeee...eeeeeeee......eeeeeee...eeeeeeeeee.....eeeeeeeee....eeeeeeeeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
2oxg Y 200 GS----STVDELTAAFTGGAATGEGGLTLTAPEIAENGNTVPIEVKAPGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGSVVKAQTTVKVTIGGC 110
| | 4 14 24 34 44 54 64 74 84 94 104
201 1
Chain Z from PDB Type:PROTEIN Length:108
aligned with Q9LCU8_PARDE | Q9LCU8 from UniProtKB/TrEMBL Length:109
Alignment length:108
11 21 31 41 51 61 71 81 91 101
Q9LCU8_PARDE 2 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 109
SCOP domains d2oxgz_ Z: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) -----SoxZ-2oxgZ01 Z:6-105 --- Pfam domains (1)
Pfam domains (2) -----SoxZ-2oxgZ02 Z:6-105 --- Pfam domains (2)
Pfam domains (3) -----SoxZ-2oxgZ03 Z:6-105 --- Pfam domains (3)
Pfam domains (4) -----SoxZ-2oxgZ04 Z:6-105 --- Pfam domains (4)
Sec.struct. author .....eeee...ee...eeeeeeeee.....................eeeeeeee..eeeeeeee........eeeeeeee...eeeeeeeee....eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
2oxg Z 1 ADDAKPRVKVPSSAKAGETVTVKALISHKMESGQRKDADGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA 108
10 20 30 40 50 60 70 80 90 100
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |