2O5E - JenaLib

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Biological Unit 1 (Jmol Viewer)

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Biological Unit 2 (Jmol Viewer)

Title :   STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLUCOSE PH 7.0

Authors :   A. Changela, R. J. Digate, A. Mondragon

Date :   05 Dec 06 (Deposition) - 03 Apr 07 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,C  (1x)
Biol. Unit 2: B,D  (1x)

Keywords :   Topoisomerase Type Ia Complex With Ssdna, Isomerase/Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Changela, R. J. Digate, A. Mondragon
Structural Studies Of E. Coli Topoisomerase Iii-Dna Complexes Reveal A Novel Type Ia Topoisomerase-Dna Conformational Intermediate.
J. Mol. Biol. V. 368 105 2007
PubMed-ID: 17331537 | Reference-DOI: 10.1016/J.JMB.2007.01.065
(for further references see the PDB file header)

*Molecule 1 - 5'-D(CPGPCPAPAPCPTPT)-3'*
	Chains	:	C, D
	Engineered	:	YES
	Synthetic	:	YES

Molecule 2 - DNA TOPOISOMERASE 3
	Chains	:	A, B
	EC Number	:	5.99.1.2
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21
	Expression System Plasmid	:	PET21
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector Type	:	PLASMID
	Gene	:	TOPB
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Synonym	:	DNA TOPOISOMERASE III

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A		C
Biological Unit 2 (1x)	:		B		D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 3)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	TDR	1	Ligand/Ion	THYMINE

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	TDR	-1	Ligand/Ion	THYMINE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	TDR	1	Ligand/Ion	THYMINE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:185 , ARG B:60 , TRP B:61 , DC C:1 , DC D:1	BINDING SITE FOR RESIDUE CL A 800
2	AC2	SOFTWARE	ARG A:60 , TRP A:61 , ARG B:185 , DC C:1 , DC D:1	BINDING SITE FOR RESIDUE CL A 801
3	AC3	SOFTWARE	DT D:7	BINDING SITE FOR RESIDUE TDR D 9

(no "SS Bond" information available for 2O5E)

Asymmetric Unit

No.	Residues
1	Lys A:21	-	Pro A:22
2	Leu A:66	-	Pro A:67
3	Leu A:359	-	Pro A:360
4	Lys B:21	-	Pro B:22
5	Leu B:66	-	Pro B:67
6	Leu B:359	-	Pro B:360

(no "SAP(SNP)/Variant" information available for 2O5E)

Asymmetric Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TOPRIM	PS50880	Toprim domain profile.	TOP3_ECOLI	1-134	2	A:1-134 B:1-134
2	TOPOISOMERASE_I_PROK	PS00396	Prokaryotic DNA topoisomerase I active site.	TOP3_ECOLI	317-332	2	A:317-332 B:317-332

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TOPRIM	PS50880	Toprim domain profile.	TOP3_ECOLI	1-134	1	A:1-134 -
2	TOPOISOMERASE_I_PROK	PS00396	Prokaryotic DNA topoisomerase I active site.	TOP3_ECOLI	317-332	1	A:317-332 -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TOPRIM	PS50880	Toprim domain profile.	TOP3_ECOLI	1-134	1	- B:1-134
2	TOPOISOMERASE_I_PROK	PS00396	Prokaryotic DNA topoisomerase I active site.	TOP3_ECOLI	317-332	1	- B:317-332

(no "Exon" information available for 2O5E)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:634
 aligned with TOP3_ECOLI | P14294 from UniProtKB/Swiss-Prot  Length:653

    Alignment length:659
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      653      
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650  |      
           TOP3_ECOLI     1 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIA------   -
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.hhhhhhhhhh......eee..eeee...eeeee.....eee.hhhhhhhhhhh..............eee...hhhhhhhhhhhhhhh.eeeee...hhhhhhhhhhhhhhh..hhhhhhhhee......hhhhhhhhh...ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhh...eeeeeeeeee.....eeeeee.................hhhhhhhhhhhhh.eeeeeeeeeeeeeee......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhh....................................hhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeeeehhhhhhh.....................eeeeeeeeeeeee......eehhhhhhhhhhhhhhh.hhhhhhh........hhhhhhhhhhhhhhh..eee...eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhh.....-------------------------..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE TOPRIM  PDB: A:1-134 UniProt: 1-134                                                                                                   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOPOISOMERASE_I_--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o5e A   1 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAP-------------------------EVGSGAIAHHHHHH 659
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620         -         -     | 650         
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     620                       646

Chain B from PDB  Type:PROTEIN  Length:631
 aligned with TOP3_ECOLI | P14294 from UniProtKB/Swiss-Prot  Length:653

    Alignment length:631
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630 
           TOP3_ECOLI     1 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKA 631
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -Toprim-2o5eB01 B:2-137                                                                                                                  ---------------Topoisom_bac-2o5eB03 B:153-593                                                                                                                                                                                                                                                                                                                                                                                                                           -------------------------------------- Pfam domains (1)
           Pfam domains (2) -Toprim-2o5eB02 B:2-137                                                                                                                  ---------------Topoisom_bac-2o5eB04 B:153-593                                                                                                                                                                                                                                                                                                                                                                                                                           -------------------------------------- Pfam domains (2)
         Sec.struct. author .eeeee.hhhhhhhhhh......ee...eee....eeeee.....eee.hhhhhhhhhhh..............eee...hhhhhhhhhhhhhhh.eeeee...hhhhhhhhhhhhhhh..hhhhhh..ee......hhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh....eeeeeeeeee.....eeeeee..hhhhhhhh.......hhhhhhhhhhhhh..eeeeeeeeeeeeee......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhh..................hhhhh.................hhhhhhhhhhhhhhhhhh....eeeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhh..............eeeeeeeeeeeee.......hhhhhhhhhhhhhhhh.hhhhhhhh.......hhhhhhhhhhhhhhh..eeee..eeeehhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.hhhhh.....hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE TOPRIM  PDB: B:1-134 UniProt: 1-134                                                                                                   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOPOISOMERASE_I_----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o5e B   1 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVEVGSGAIAHHHHH 658
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       647       657 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   618|            
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    646

Chain C from PDB  Type:DNA  Length:7
                                       
                 2o5e C   1 CGCAACT   7

Chain D from PDB  Type:DNA  Length:7
                                       
                 2o5e D   1 CGCAACT   7

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2O5E)

(no "CATH Domain" information available for 2O5E)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Toprim-like (19)

Family: Toprim (19)

Escherichia coli (strain K12) (9)

1a	Toprim-2o5eB01	B:2-137
1b	Toprim-2o5eB02	B:2-137

Clan: no clan defined [family: Topoisom_bac] (8)

Family: Topoisom_bac (8)

Escherichia coli (strain K12) (8)

2a	Topoisom_bac-2o5eB03	B:153-593
2b	Topoisom_bac-2o5eB04	B:153-593

Asymmetric Unit(hide GO term definitions)

Chain A,B (TOP3_ECOLI | P14294)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0003916	DNA topoisomerase activity	Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA.
	GO:0003917	DNA topoisomerase type I activity	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0006310	DNA recombination	Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
	GO:0006265	DNA topological change	The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.
	GO:0051304	chromosome separation	The cell cycle process in which paired chromosomes are detached from each other. Chromosome separation begins with the release of cohesin complexes from chromosomes; in budding yeast, this includes the cleavage of cohesin complexes along the chromosome arms, followed by the separation of the centromeric regions. Chromosome separation also includes formation of chromatid axes mediated by condensins, and ends with the disentangling of inter-sister catenation catalyzed by topoisomerase II (topo II).

Asymmetric Unit
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	Cis Peptide Bonds
		Leu A:359 - Pro A:360	[ RasMol ]
		Leu A:66 - Pro A:67	[ RasMol ]
		Leu B:359 - Pro B:360	[ RasMol ]
		Leu B:66 - Pro B:67	[ RasMol ]
		Lys A:21 - Pro A:22	[ RasMol ]
		Lys B:21 - Pro B:22	[ RasMol ]

Biological Units
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	2o5e
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UniProtKB/Swiss-Prot
	TOP3_ECOLI \| P14294	:	1d6m 1i7d 2o19 2o54 2o59 2o5c

1d6m	CRYSTAL STRUCTURE OF E. COLI DNA TOPOISOMERASE III
1i7d	NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE
2o19	STRUCTURAL STUDIES OF E. COLI TOPOISOMERASE III-DNA COMPLEXES REVEAL A NOVEL TYPE IA TOPOISOMERASE-DNA CONFORMATIONAL INTERMEDIATE
2o54	STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLYCEROL AT PH 7.0
2o59	STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLYCEROL PH 8.0
2o5c	STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLUCOSE PH 5.5

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 3)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (2, 4)

Gene Ontology (9, 9)

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