2O2C - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM T. BRUCEI CONTAINING GLUCOSE-6-PHOSPHATE IN THE ACTIVE SITE

Authors :   D. Arsenieva, G. H. Mazock, B. L. Appavu, C. J. Jeffery

Date :   29 Nov 06 (Deposition) - 13 Nov 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.58

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (2x)
Biol. Unit 2: B,C  (1x)

Keywords :   Dimer, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Arsenieva, B. L. Appavu, G. H. Mazock, C. J. Jeffery
Crystal Structure Of Phosphoglucose Isomerase From Trypanosoma Brucei Complexed With Glucose-6-Phosphate At 1. A Resolution
Proteins V. 74 72 2008
PubMed-ID: 18561188 | Reference-DOI: 10.1002/PROT.22133

Molecule 1 - GLUCOSE-6-PHOSPHATE ISOMERASE, GLYCOSOMAL
	Chains	:	A, B, C
	EC Number	:	5.3.1.9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PGEMEX-1
	Expression System Strain	:	BL21(DE3)PLYSS
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	PGI
	Organism Scientific	:	TRYPANOSOMA BRUCEI BRUCEI
	Organism Taxid	:	5702
	Other Details	:	GENE PLACED DIRECTLY UNDER T7 PROMOTER
	Strain	:	927/4 GUTAT10.1
	Synonym	:	GPI; PHOSPHOGLUCOSE ISOMERASE; PGI; PHOSPHOHEXOSE ISOMERASE

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (2x)	:	A
Biological Unit 2 (1x)	:		B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 9)

No.	Name	Count	Type	Full Name
1	G6Q	3	Ligand/Ion	GLUCOSE-6-PHOSPHATE
2	GOL	6	Ligand/Ion	GLYCEROL

Biological Unit 1 (2, 6)

No.	Name	Count	Type	Full Name
1	G6Q	2	Ligand/Ion	GLUCOSE-6-PHOSPHATE
2	GOL	4	Ligand/Ion	GLYCEROL

Biological Unit 2 (2, 6)

No.	Name	Count	Type	Full Name
1	G6Q	2	Ligand/Ion	GLUCOSE-6-PHOSPHATE
2	GOL	4	Ligand/Ion	GLYCEROL

Asymmetric Unit (9, 9)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ILE A:205 , GLY A:206 , GLY A:207 , SER A:208 , SER A:258 , LYS A:259 , THR A:260 , THR A:263 , GLY A:325 , ARG A:326 , GLN A:407 , GLU A:411 , HIS A:442 , GLN A:564 , HOH A:7018 , HOH A:7128 , HOH A:7164 , HOH A:7337 , HOH A:7340 , HOH A:7363	BINDING SITE FOR RESIDUE G6Q A 5001
2	AC2	SOFTWARE	ILE B:205 , GLY B:206 , GLY B:207 , SER B:208 , SER B:258 , LYS B:259 , THR B:260 , THR B:263 , GLY B:325 , ARG B:326 , GLN B:407 , GLU B:411 , GLN B:564 , HOH B:7012 , HOH B:7112 , HOH B:7288 , HOH B:7318 , HOH B:7325 , HOH B:7362 , HOH B:7373 , HOH B:7447 , HIS C:442	BINDING SITE FOR RESIDUE G6Q B 5002
3	AC3	SOFTWARE	HIS B:442 , ILE C:205 , GLY C:207 , SER C:208 , SER C:258 , LYS C:259 , THR C:260 , THR C:263 , GLY C:325 , ARG C:326 , GLN C:407 , GLU C:411 , GLN C:564 , HOH C:7014 , HOH C:7105 , HOH C:7243 , HOH C:7257 , HOH C:7261 , HOH C:7273	BINDING SITE FOR RESIDUE G6Q C 5003
4	AC4	SOFTWARE	THR A:77 , ASP A:78 , ARG A:81 , TYR A:85 , ASN A:109 , ASP A:110 , HOH A:7213 , HOH A:7278 , ASN B:588	BINDING SITE FOR RESIDUE GOL A 7001
5	AC5	SOFTWARE	LEU A:278 , GLU A:288 , LYS A:289 , GLY A:290 , SER A:291 , VAL A:292 , HOH A:7242	BINDING SITE FOR RESIDUE GOL A 7005
6	AC6	SOFTWARE	HIS B:74 , THR B:77 , ASP B:78 , ARG B:81 , ASP B:110 , HOH B:7383	BINDING SITE FOR RESIDUE GOL B 7002
7	AC7	SOFTWARE	GLU B:188 , TRP B:189 , LYS B:190 , LYS B:294 , HOH B:7264 , HOH B:7303	BINDING SITE FOR RESIDUE GOL B 7004
8	AC8	SOFTWARE	LYS B:220 , GLN B:396 , TYR B:397 , TRP B:399 , HOH B:7146 , HOH B:7241 , HOH B:7403 , HIS C:239 , GLU C:242	BINDING SITE FOR RESIDUE GOL B 7006
9	AC9	SOFTWARE	HIS C:74 , ASP C:78 , ARG C:81 , TYR C:85 , ASN C:109 , ASP C:110	BINDING SITE FOR RESIDUE GOL C 7003

(no "SS Bond" information available for 2O2C)

Asymmetric Unit

No.	Residues
1	Gly A:437	-	Thr A:438
2	Gly B:437	-	Thr B:438
3	Gly C:437	-	Thr C:438

(no "SAP(SNP)/Variant" information available for 2O2C)

Asymmetric Unit (3, 9)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	P_GLUCOSE_ISOMERASE_3	PS51463	Glucose-6-phosphate isomerase family profile.	G6PI_TRYBB	53-604	3	A:53-604 B:53-604 C:53-604
2	P_GLUCOSE_ISOMERASE_1	PS00765	Phosphoglucose isomerase signature 1.	G6PI_TRYBB	321-334	3	A:321-334 B:321-334 C:321-334
3	P_GLUCOSE_ISOMERASE_2	PS00174	Phosphoglucose isomerase signature 2.	G6PI_TRYBB	554-571	3	A:554-571 B:554-571 C:554-571

Biological Unit 1 (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	P_GLUCOSE_ISOMERASE_3	PS51463	Glucose-6-phosphate isomerase family profile.	G6PI_TRYBB	53-604	2	A:53-604 - -
2	P_GLUCOSE_ISOMERASE_1	PS00765	Phosphoglucose isomerase signature 1.	G6PI_TRYBB	321-334	2	A:321-334 - -
3	P_GLUCOSE_ISOMERASE_2	PS00174	Phosphoglucose isomerase signature 2.	G6PI_TRYBB	554-571	2	A:554-571 - -

Biological Unit 2 (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	P_GLUCOSE_ISOMERASE_3	PS51463	Glucose-6-phosphate isomerase family profile.	G6PI_TRYBB	53-604	2	- B:53-604 C:53-604
2	P_GLUCOSE_ISOMERASE_1	PS00765	Phosphoglucose isomerase signature 1.	G6PI_TRYBB	321-334	2	- B:321-334 C:321-334
3	P_GLUCOSE_ISOMERASE_2	PS00174	Phosphoglucose isomerase signature 2.	G6PI_TRYBB	554-571	2	- B:554-571 C:554-571

(no "Exon" information available for 2O2C)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:564
 aligned with G6PI_TRYBB | P13377 from UniProtKB/Swiss-Prot  Length:607

    Alignment length:564
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602    
           G6PI_TRYBB    43 GADADTTLTSCASWTQLQKLYEQYGDEPIKKHFEADSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
               SCOP domains d2o2ca_ A: Phosphoglucose isomerase, PGI                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains 2o2cA01 A:43-186,A:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                                 2o2cA02 A:187-320 Glucose-6-phosphate isomerase like protein; domain 1                                                                2o2cA01 A:43-186,A:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                                                                                                                               2o2cA03 A:559-606                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh..hhhhhhhhh.hhhhhheeeee.......eeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhh............eeeee.hhhhhhhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhh.eeeeee.....hhhhhhhhhhhhhhhhhhhhhh......hhhhheeeee.hhhhhhhhh.hhh.eee.....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhhh.....eeeeeeee......hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhh..........eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ----------P_GLUCOSE_ISOMERASE_3  PDB: A:53-604 UniProt: 53-604                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    -- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOMERAS----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o2c A  43 GADADTTLTSCASWTQLQKLYEQYGDEPIKKHFETDSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602

Chain B from PDB  Type:PROTEIN  Length:564
 aligned with G6PI_TRYBB | P13377 from UniProtKB/Swiss-Prot  Length:607

    Alignment length:564
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602    
           G6PI_TRYBB    43 GADADTTLTSCASWTQLQKLYEQYGDEPIKKHFEADSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
               SCOP domains d2o2cb_ B: Phosphoglucose isomerase, PGI                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains 2o2cB01 B:43-186,B:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                                 2o2cB02 B:187-320 Glucose-6-phosphate isomerase like protein; domain 1                                                                2o2cB01 B:43-186,B:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                                                                                                                               2o2cB03 B:559-606                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh..hhhhhhhhh.hhhhhheeeee.......eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhh............eeeee.hhhhhhhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhh.eeeeee.....hhhhhhhhhhhhhhhhhhhhhh......hhhhheeeee.hhhhhhhhh.hhh.eee.....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhhh.....eeeeeeee......hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ----------P_GLUCOSE_ISOMERASE_3  PDB: B:53-604 UniProt: 53-604                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    -- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOMERAS----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o2c B  43 GADADTTLTSCASWTQLQKLYEQYGDEPIKKHFETDSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602

Chain C from PDB  Type:PROTEIN  Length:561
 aligned with G6PI_TRYBB | P13377 from UniProtKB/Swiss-Prot  Length:607

    Alignment length:561
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605 
           G6PI_TRYBB    46 ADTTLTSCASWTQLQKLYEQYGDEPIKKHFEADSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
               SCOP domains d2o2cc_ C: Phosphoglucose isomerase, PGI                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2o2cC01 C:46-186,C:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                              2o2cC02 C:187-320 Glucose-6-phosphate isomerase like protein; domain 1                                                                2o2cC01 C:46-186,C:321-558 Glucose-6-phosphate isomerase like protein; domain 1                                                                                                                                                               2o2cC03 C:559-606                                CATH domains
           Pfam domains (1) --------------------------------------------------------PGI-2o2cC01 C:102-598                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            -------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------PGI-2o2cC02 C:102-598                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            -------- Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------PGI-2o2cC03 C:102-598                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            -------- Pfam domains (3)
         Sec.struct. author .......hhhhhhhhhhhhhhh...hhhhhhhh.hhhhhheeeee.......eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhh............eeeee.hhhhhhhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhh.eeeeee.....hhhhhhhhhhhhhhhhhhhhhh......hhhhheeeee.hhhhhhhhh.hhh.eee.....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhhhhh................eee....hhhhh.hhhhhhhh.....eeeeeeee......hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------P_GLUCOSE_ISOMERASE_3  PDB: C:53-604 UniProt: 53-604                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    -- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P_GLUCOSE_ISOMERAS----------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o2c C  46 ADTTLTSCASWTQLQKLYEQYGDEPIKKHFETDSERGQRYSVKVSLGSKDENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPVLHIALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNNQKVKEFGIDEENMFQFWDWVGGRYSMWSAIGLPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGERSAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH 606
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: SIS domain (85)

Superfamily: SIS domain (85)

Family: Phosphoglucose isomerase, PGI (37)

Protein domain: Phosphoglucose isomerase, PGI (24)

Trypanosoma brucei [TaxId: 5702] (2)

1a	d2o2ca_	A:
1b	d2o2cb_	B:
1c	d2o2cc_	C:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: Glucose-6-phosphate isomerase like protein; domain 1 (105)

Trypanosoma brucei brucei. Organism_taxid: 5702. Strain: 927/4 gutat10.1. (2)

1a	2o2cA02	A:187-320
1b	2o2cB02	B:187-320
1c	2o2cC02	C:187-320
1d	2o2cC01	C:46-186,C:321-558
1e	2o2cA01	A:43-186,A:321-558
1f	2o2cB01	B:43-186,B:321-558

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Phosphoglucose isomerase, C-terminal domain (32)

Homologous Superfamily: [code=1.10.1390.10, no name defined] (32)

Trypanosoma brucei brucei. Organism_taxid: 5702. Strain: 927/4 gutat10.1. (2)

2a	2o2cA03	A:559-606
2b	2o2cB03	B:559-606
2c	2o2cC03	C:559-606

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: SIS (53)

Family: PGI (23)

Trypanosoma brucei brucei (2)

1a	PGI-2o2cC01	C:102-598
1b	PGI-2o2cC02	C:102-598
1c	PGI-2o2cC03	C:102-598

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (G6PI_TRYBB | P13377)

molecular function
	GO:0004347	glucose-6-phosphate isomerase activity	Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
	GO:0006094	gluconeogenesis	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
cellular component
	GO:0020015	glycosome	A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.
	GO:0005777	peroxisome	A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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Description

Compounds

Structural Features

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Ligands, Modified Residues, Ions (2, 9)

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