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(-) Description

Title :  STRUCTURE OF NOWA CYSTEINE RICH DOMAIN 6
 
Authors :  S. Meier, P. R. Jensen, P. Adamczyk, H. P. Bachinger, T. W. Holstein, J. Engel, S. Ozbek, S. Grzesiek
Date :  17 Nov 06  (Deposition) - 02 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Disulfide Rich, Turns, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Meier, P. R. Jensen, P. Adamczyk, H. P. Bachinger, T. W. Holstein, J. Engel, S. Ozbek, S. Grzesiek
Sequence-Structure And Structure-Function Analysis In Cysteine-Rich Domains Forming The Ultrastable Nematocyst Wall.
J. Mol. Biol. V. 368 718 2007
PubMed-ID: 17362991  |  Reference-DOI: 10.1016/J.JMB.2007.02.026
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NEMATOCYST OUTER WALL ANTIGEN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PGEV2
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: DOMAIN 6 OF THE NOWA OCTAREPEAT DOMAIN
    Gene: NOWA
    Organism Scientific: HYDRA VULGARIS
    Organism Taxid: 6087

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2NX6)

(-) Sites  (0, 0)

(no "Site" information available for 2NX6)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:5 -A:19
2A:11 -A:24
3A:15 -A:23

(-) Cis Peptide Bonds  (1, 10)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10Ala A:16 -Pro A:17

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NX6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2NX6)

(-) Exons   (0, 0)

(no "Exon" information available for 2NX6)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:27
 aligned with Q8IT70_HYDVU | Q8IT70 from UniProtKB/TrEMBL  Length:774

    Alignment length:49
                                   632       642       652       662         
         Q8IT70_HYDVU   623 ASCAPQCSQQCCQQPSMSIQPLQISSCPQFPSCSPSCAPQCSQQCCQQP 671
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..----------------------.........hhhhh...hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 2nx6 A   1 GS----------------------SSCPQFPSCSPSCAPQCSQQCCQQP  27
                             |       -         -    |    8        18         
                             2                      3
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NX6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NX6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2NX6)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2NX6)

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  Cis Peptide Bonds
    Ala A:16 - Pro A:17   [ RasMol ]  
 

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  2nx6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8IT70_HYDVU | Q8IT70: 2hm3 2hm4 2hm5 2hm6 2nx7

(-) Related Entries Specified in the PDB File

2hm3 DMOAIN 1 OF OCTADE REPEAT